RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 VPS72Q15906 364 aa27.58■■■□□ 2.01
CAPN1-211ENST00000527739 SEPT12Q8IYM1 358 aa27.58■■■□□ 2.01
CAPN1-211ENST00000527739 CABP2Q9NPB3 220 aa27.57■■■□□ 2
CAPN1-211ENST00000527739 NWD2Q9ULI1 1742 aa27.56■■■□□ 2
CAPN1-211ENST00000527739 ROCK2O75116 1388 aaKnown RBP27.56■■■□□ 2
CAPN1-211ENST00000527739 ATP7BP35670 1465 aa27.56■■■□□ 2
CAPN1-211ENST00000527739 TRPM3Q9HCF6 1732 aaPredicted RBP27.55■■■□□ 2
CAPN1-211ENST00000527739 FAM83GA6ND36 823 aa27.55■■■□□ 2
CAPN1-211ENST00000527739 CCDC9Q9Y3X0 531 aaKnown RBP27.55■■■□□ 2
CAPN1-211ENST00000527739 ACEP12821 1306 aa27.55■■■□□ 2
CAPN1-211ENST00000527739 BLMP54132 1417 aaPredicted RBP27.54■■■□□ 2
CAPN1-211ENST00000527739 NBPF8Q3BBV2 869 aa27.54■■■□□ 2
CAPN1-211ENST00000527739 NUTM2GQ5VZR2 741 aa27.52■■■□□ 2
CAPN1-211ENST00000527739 DEFB132Q7Z7B7 95 aa27.52■■■□□ 2
CAPN1-211ENST00000527739 PLEKHG3A1L390 1219 aa27.51■■□□□ 1.99
CAPN1-211ENST00000527739 TONSLQ96HA7 1378 aa27.5■■□□□ 1.99
CAPN1-211ENST00000527739 ALS2Q96Q42 1657 aa27.5■■□□□ 1.99
CAPN1-211ENST00000527739 ONECUT3O60422 494 aaPredicted RBP27.5■■□□□ 1.99
CAPN1-211ENST00000527739 NRAPQ86VF7 1730 aa27.49■■□□□ 1.99
CAPN1-211ENST00000527739 EVC2Q86UK5 1308 aa27.46■■□□□ 1.99
CAPN1-211ENST00000527739 KRT27Q7Z3Y8 459 aa27.46■■□□□ 1.99
CAPN1-211ENST00000527739 BTG4Q9NY30 223 aa27.46■■□□□ 1.99
CAPN1-211ENST00000527739 CABP1Q9NZU7 370 aa27.46■■□□□ 1.99
CAPN1-211ENST00000527739 POLR3AO14802 1390 aaPredicted RBP27.46■■□□□ 1.99
CAPN1-211ENST00000527739 PPIP5K1Q6PFW1 1433 aa27.45■■□□□ 1.98
CAPN1-211ENST00000527739 ABTB2Q8N961 1025 aa27.45■■□□□ 1.98
CAPN1-211ENST00000527739 CARD11Q9BXL7 1154 aa27.44■■□□□ 1.98
CAPN1-211ENST00000527739 PRDM11Q9NQV5 511 aa27.44■■□□□ 1.98
CAPN1-211ENST00000527739 FAM98CQ17RN3 349 aaKnown RBP27.43■■□□□ 1.98
CAPN1-211ENST00000527739 ITSN1Q15811 1721 aa27.43■■□□□ 1.98
CAPN1-211ENST00000527739 CRYBG1Q9Y4K1 1723 aa27.43■■□□□ 1.98
CAPN1-211ENST00000527739 COL14A1Q05707 1796 aaKnown RBP27.42■■□□□ 1.98
CAPN1-211ENST00000527739 TRPM1Q7Z4N2 1603 aa27.41■■□□□ 1.98
CAPN1-211ENST00000527739 A0A0G2JS52 829 aa27.41■■□□□ 1.98
CAPN1-211ENST00000527739 ZC3H6P61129 1189 aaKnown RBP27.41■■□□□ 1.98
CAPN1-211ENST00000527739 MYT1Q01538 1121 aa27.41■■□□□ 1.98
CAPN1-211ENST00000527739 SF3B2Q13435 895 aaKnown RBP27.4■■□□□ 1.98
CAPN1-211ENST00000527739 CHRNA2Q15822 529 aa27.39■■□□□ 1.98
CAPN1-211ENST00000527739 QRICH2Q9H0J4 1663 aa27.38■■□□□ 1.97
CAPN1-211ENST00000527739 KIAA0232Q92628 1395 aa27.36■■□□□ 1.97
CAPN1-211ENST00000527739 NLRP13Q86W25 1043 aa27.36■■□□□ 1.97
CAPN1-211ENST00000527739 FAM182BQ5T319 152 aa27.35■■□□□ 1.97
CAPN1-211ENST00000527739 TOPAZ1Q8N9V7 1692 aa27.34■■□□□ 1.97
CAPN1-211ENST00000527739 STRN4Q9NRL3 753 aa27.34■■□□□ 1.97
CAPN1-211ENST00000527739 SPATA31A5Q5VU36 1347 aa27.34■■□□□ 1.97
CAPN1-211ENST00000527739 SPATA31A7Q8IWB4 1347 aa27.34■■□□□ 1.97
CAPN1-211ENST00000527739 ZBTB7CA1YPR0 619 aa27.31■■□□□ 1.96
CAPN1-211ENST00000527739 EVA1CP58658 441 aa27.31■■□□□ 1.96
CAPN1-211ENST00000527739 NLRP6P59044 892 aa27.31■■□□□ 1.96
CAPN1-211ENST00000527739 THSD7AQ9UPZ6 1657 aa27.3■■□□□ 1.96
CAPN1-211ENST00000527739 GCP02774 474 aa27.29■■□□□ 1.96
CAPN1-211ENST00000527739 PCGF6Q9BYE7 350 aa27.29■■□□□ 1.96
CAPN1-211ENST00000527739 PHRF1Q9P1Y6 1649 aaKnown RBP27.29■■□□□ 1.96
CAPN1-211ENST00000527739 ZNF692Q9BU19 519 aaPredicted RBP27.28■■□□□ 1.96
CAPN1-211ENST00000527739 USP6P35125 1406 aa27.27■■□□□ 1.96
CAPN1-211ENST00000527739 BRD4O60885 1362 aaPredicted RBP27.27■■□□□ 1.96
CAPN1-211ENST00000527739 PSDA5PKW4 1024 aaPredicted RBP27.27■■□□□ 1.96
CAPN1-211ENST00000527739 BAG6P46379 1132 aa27.27■■□□□ 1.96
CAPN1-211ENST00000527739 USP19O94966 1318 aa27.25■■□□□ 1.95
CAPN1-211ENST00000527739 EN1Q05925 392 aaPredicted RBP27.25■■□□□ 1.95
CAPN1-211ENST00000527739 TMC1Q8TDI8 760 aa27.25■■□□□ 1.95
CAPN1-211ENST00000527739 USP35Q9P2H5 1018 aa27.25■■□□□ 1.95
CAPN1-211ENST00000527739 SPATA31A1Q5TZJ5 1347 aa27.23■■□□□ 1.95
CAPN1-211ENST00000527739 RGPD1P0DJD0 1748 aa27.23■■□□□ 1.95
CAPN1-211ENST00000527739 TTC21BQ7Z4L5 1316 aa27.21■■□□□ 1.95
CAPN1-211ENST00000527739 LRP5O75197 1615 aa27.21■■□□□ 1.95
CAPN1-211ENST00000527739 SOX12O15370 315 aa27.2■■□□□ 1.94
CAPN1-211ENST00000527739 TNS1Q9HBL0 1735 aaKnown RBP27.2■■□□□ 1.94
CAPN1-211ENST00000527739 KTN1Q86UP2 1357 aaKnown RBP27.2■■□□□ 1.94
CAPN1-211ENST00000527739 SBNO2Q9Y2G9 1366 aa27.19■■□□□ 1.94
CAPN1-211ENST00000527739 ST20-MTHFSA0A0A6YYL1 179 aa27.18■■□□□ 1.94
CAPN1-211ENST00000527739 CPDO75976 1380 aa27.18■■□□□ 1.94
CAPN1-211ENST00000527739 NRKQ7Z2Y5 1582 aa27.18■■□□□ 1.94
CAPN1-211ENST00000527739 LARP1Q6PKG0 1096 aaKnown RBP27.17■■□□□ 1.94
CAPN1-211ENST00000527739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.17■■□□□ 1.94
CAPN1-211ENST00000527739 SLC12A5Q9H2X9 1139 aa27.16■■□□□ 1.94
CAPN1-211ENST00000527739 SSH2Q76I76 1423 aa27.16■■□□□ 1.94
CAPN1-211ENST00000527739 HDGFL2Q7Z4V5 671 aaPredicted RBP27.15■■□□□ 1.94
CAPN1-211ENST00000527739 DISP2A7MBM2 1401 aa27.15■■□□□ 1.94
CAPN1-211ENST00000527739 TTC21AQ8NDW8 1320 aa27.15■■□□□ 1.94
CAPN1-211ENST00000527739 CAMTA1Q9Y6Y1 1673 aa27.14■■□□□ 1.94
CAPN1-211ENST00000527739 EZH2Q15910 746 aaKnown RBP27.14■■□□□ 1.94
CAPN1-211ENST00000527739 TRIM37O94972 964 aa27.13■■□□□ 1.93
CAPN1-211ENST00000527739 R3HDM1Q15032 1099 aaKnown RBP27.12■■□□□ 1.93
CAPN1-211ENST00000527739 KCNH5Q8NCM2 988 aa27.12■■□□□ 1.93
CAPN1-211ENST00000527739 CPSF1Q10570 1443 aaKnown RBP27.12■■□□□ 1.93
CAPN1-211ENST00000527739 LMO7Q8WWI1 1683 aa27.11■■□□□ 1.93
CAPN1-211ENST00000527739 FAM196AQ6ZSG2 479 aa27.1■■□□□ 1.93
CAPN1-211ENST00000527739 TCP11L2Q8N4U5 519 aa27.1■■□□□ 1.93
CAPN1-211ENST00000527739 TERF2IPQ9NYB0 399 aa27.1■■□□□ 1.93
CAPN1-211ENST00000527739 CAMKK2Q96RR4 588 aa27.09■■□□□ 1.93
CAPN1-211ENST00000527739 TESK2Q96S53 571 aa27.09■■□□□ 1.93
CAPN1-211ENST00000527739 SLC24A1O60721 1099 aa27.08■■□□□ 1.93
CAPN1-211ENST00000527739 BARGINQ6ZT62 677 aa27.08■■□□□ 1.93
CAPN1-211ENST00000527739 PDE3BQ13370 1112 aa27.07■■□□□ 1.92
CAPN1-211ENST00000527739 NME9Q86XW9 330 aa27.07■■□□□ 1.92
CAPN1-211ENST00000527739 PUS7Q96PZ0 661 aaKnown RBP27.07■■□□□ 1.92
CAPN1-211ENST00000527739 AATKQ6ZMQ8 1374 aa27.07■■□□□ 1.92
CAPN1-211ENST00000527739 TOM1L2Q6ZVM7 507 aa27.06■■□□□ 1.92
CAPN1-211ENST00000527739 APBA3O96018 575 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms