RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 CABP1Q9NZU7 370 aa23.86■■□□□ 1.41
NR1H3-229ENST00000527464 USP21Q9UK80 565 aa23.86■■□□□ 1.41
NR1H3-229ENST00000527464 ATAD2Q6PL18 1390 aa23.86■■□□□ 1.41
NR1H3-229ENST00000527464 ABCA3Q99758 1704 aa23.85■■□□□ 1.41
NR1H3-229ENST00000527464 CABLES1Q8TDN4 633 aa23.85■■□□□ 1.41
NR1H3-229ENST00000527464 QTRT2Q9H974 415 aaKnown RBP23.85■■□□□ 1.41
NR1H3-229ENST00000527464 PUS7Q96PZ0 661 aaKnown RBP23.83■■□□□ 1.41
NR1H3-229ENST00000527464 TRPC5Q9UL62 973 aaPredicted RBP23.83■■□□□ 1.41
NR1H3-229ENST00000527464 CDK12Q9NYV4 1490 aaPredicted RBP23.82■■□□□ 1.4
NR1H3-229ENST00000527464 RBM6P78332 1123 aaKnown RBP23.82■■□□□ 1.4
NR1H3-229ENST00000527464 BCL9LQ86UU0 1499 aa23.81■■□□□ 1.4
NR1H3-229ENST00000527464 SLIT2O94813 1529 aa23.8■■□□□ 1.4
NR1H3-229ENST00000527464 ZNF692Q9BU19 519 aaPredicted RBP23.8■■□□□ 1.4
NR1H3-229ENST00000527464 ATRNO75882 1429 aa23.79■■□□□ 1.4
NR1H3-229ENST00000527464 USP6P35125 1406 aa23.79■■□□□ 1.4
NR1H3-229ENST00000527464 ST20-MTHFSA0A0A6YYL1 179 aa23.79■■□□□ 1.4
NR1H3-229ENST00000527464 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.79■■□□□ 1.4
NR1H3-229ENST00000527464 CRYBG1Q9Y4K1 1723 aa23.79■■□□□ 1.4
NR1H3-229ENST00000527464 PLEKHG5O94827 1062 aa23.78■■□□□ 1.4
NR1H3-229ENST00000527464 TESK2Q96S53 571 aa23.78■■□□□ 1.4
NR1H3-229ENST00000527464 UNC5CLQ8IV45 518 aa23.77■■□□□ 1.4
NR1H3-229ENST00000527464 ABTB2Q8N961 1025 aa23.77■■□□□ 1.4
NR1H3-229ENST00000527464 USP47Q96K76 1375 aa23.77■■□□□ 1.4
NR1H3-229ENST00000527464 NWD2Q9ULI1 1742 aa23.76■■□□□ 1.39
NR1H3-229ENST00000527464 SSH2Q76I76 1423 aa23.75■■□□□ 1.39
NR1H3-229ENST00000527464 AKAP12Q02952 1782 aa23.74■■□□□ 1.39
NR1H3-229ENST00000527464 FAM83GA6ND36 823 aa23.74■■□□□ 1.39
NR1H3-229ENST00000527464 NLRP13Q86W25 1043 aa23.74■■□□□ 1.39
NR1H3-229ENST00000527464 CPSF1Q10570 1443 aaKnown RBP23.74■■□□□ 1.39
NR1H3-229ENST00000527464 PLCH1Q4KWH8 1693 aa23.73■■□□□ 1.39
NR1H3-229ENST00000527464 USP19O94966 1318 aa23.72■■□□□ 1.39
NR1H3-229ENST00000527464 PHRF1Q9P1Y6 1649 aaKnown RBP23.72■■□□□ 1.39
NR1H3-229ENST00000527464 COL14A1Q05707 1796 aaKnown RBP23.72■■□□□ 1.39
NR1H3-229ENST00000527464 NUTM2GQ5VZR2 741 aa23.71■■□□□ 1.39
NR1H3-229ENST00000527464 NINLQ9Y2I6 1382 aa23.7■■□□□ 1.38
NR1H3-229ENST00000527464 TTC21AQ8NDW8 1320 aa23.7■■□□□ 1.38
NR1H3-229ENST00000527464 GJD4Q96KN9 370 aaPredicted RBP23.7■■□□□ 1.38
NR1H3-229ENST00000527464 KTN1Q86UP2 1357 aaKnown RBP23.69■■□□□ 1.38
NR1H3-229ENST00000527464 PRDM11Q9NQV5 511 aa23.69■■□□□ 1.38
NR1H3-229ENST00000527464 RGS12O14924 1447 aa23.68■■□□□ 1.38
NR1H3-229ENST00000527464 TTC21BQ7Z4L5 1316 aa23.68■■□□□ 1.38
NR1H3-229ENST00000527464 TMF1P82094 1093 aa23.68■■□□□ 1.38
NR1H3-229ENST00000527464 VPS72Q15906 364 aa23.68■■□□□ 1.38
NR1H3-229ENST00000527464 TMC1Q8TDI8 760 aa23.68■■□□□ 1.38
NR1H3-229ENST00000527464 NLRP6P59044 892 aa23.67■■□□□ 1.38
NR1H3-229ENST00000527464 HDGFL2Q7Z4V5 671 aaPredicted RBP23.67■■□□□ 1.38
NR1H3-229ENST00000527464 TERF2IPQ9NYB0 399 aa23.67■■□□□ 1.38
NR1H3-229ENST00000527464 MON2Q7Z3U7 1717 aa23.67■■□□□ 1.38
NR1H3-229ENST00000527464 KIAA0232Q92628 1395 aa23.66■■□□□ 1.38
NR1H3-229ENST00000527464 CDCA8Q53HL2 280 aa23.66■■□□□ 1.38
NR1H3-229ENST00000527464 SLC12A5Q9H2X9 1139 aa23.66■■□□□ 1.38
NR1H3-229ENST00000527464 BTG4Q9NY30 223 aa23.66■■□□□ 1.38
NR1H3-229ENST00000527464 CPDO75976 1380 aa23.65■■□□□ 1.38
NR1H3-229ENST00000527464 NRKQ7Z2Y5 1582 aa23.65■■□□□ 1.38
NR1H3-229ENST00000527464 CD163L1Q9NR16 1453 aa23.65■■□□□ 1.38
NR1H3-229ENST00000527464 GCP02774 474 aa23.65■■□□□ 1.38
NR1H3-229ENST00000527464 PIK3C2AO00443 1686 aa23.64■■□□□ 1.38
NR1H3-229ENST00000527464 ZC3H6P61129 1189 aaKnown RBP23.64■■□□□ 1.37
NR1H3-229ENST00000527464 NRAPQ86VF7 1730 aa23.64■■□□□ 1.37
NR1H3-229ENST00000527464 SLIT3O75094 1523 aa23.63■■□□□ 1.37
NR1H3-229ENST00000527464 GLI3P10071 1580 aa23.62■■□□□ 1.37
NR1H3-229ENST00000527464 EDC4Q6P2E9 1401 aaKnown RBP23.6■■□□□ 1.37
NR1H3-229ENST00000527464 CCDC9Q9Y3X0 531 aaKnown RBP23.6■■□□□ 1.37
NR1H3-229ENST00000527464 CHRNA2Q15822 529 aa23.59■■□□□ 1.37
NR1H3-229ENST00000527464 KCNH5Q8NCM2 988 aa23.59■■□□□ 1.37
NR1H3-229ENST00000527464 A0A1W2PP64 1363 aa23.59■■□□□ 1.37
NR1H3-229ENST00000527464 USP31Q70CQ4 1352 aa23.58■■□□□ 1.37
NR1H3-229ENST00000527464 ONECUT3O60422 494 aaPredicted RBP23.58■■□□□ 1.37
NR1H3-229ENST00000527464 EIF4G2P78344 907 aaKnown RBP eCLIP23.57■■□□□ 1.36
NR1H3-229ENST00000527464 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.56■■□□□ 1.36
NR1H3-229ENST00000527464 SPATA31A5Q5VU36 1347 aa23.56■■□□□ 1.36
NR1H3-229ENST00000527464 SPATA31A7Q8IWB4 1347 aa23.56■■□□□ 1.36
NR1H3-229ENST00000527464 ANKRD36BQ8N2N9 1353 aa23.55■■□□□ 1.36
NR1H3-229ENST00000527464 USP54Q70EL1 1684 aa23.55■■□□□ 1.36
NR1H3-229ENST00000527464 LMO7Q8WWI1 1683 aa23.55■■□□□ 1.36
NR1H3-229ENST00000527464 AATKQ6ZMQ8 1374 aa23.54■■□□□ 1.36
NR1H3-229ENST00000527464 UPF1Q92900 1129 aaKnown RBP eCLIP23.53■■□□□ 1.36
NR1H3-229ENST00000527464 CAMTA1Q9Y6Y1 1673 aa23.53■■□□□ 1.36
NR1H3-229ENST00000527464 EVA1CP58658 441 aa23.52■■□□□ 1.36
NR1H3-229ENST00000527464 NME9Q86XW9 330 aa23.52■■□□□ 1.36
NR1H3-229ENST00000527464 ARHGEF25Q86VW2 580 aa23.51■■□□□ 1.35
NR1H3-229ENST00000527464 SEPT12Q8IYM1 358 aa23.51■■□□□ 1.35
NR1H3-229ENST00000527464 STRN4Q9NRL3 753 aa23.51■■□□□ 1.35
NR1H3-229ENST00000527464 HSPA5P11021 654 aaKnown RBP23.5■■□□□ 1.35
NR1H3-229ENST00000527464 SPATA31A1Q5TZJ5 1347 aa23.5■■□□□ 1.35
NR1H3-229ENST00000527464 NFAT5O94916 1531 aa23.49■■□□□ 1.35
NR1H3-229ENST00000527464 ZRANB1Q9UGI0 708 aa23.48■■□□□ 1.35
NR1H3-229ENST00000527464 COL18A1P39060 1754 aa23.47■■□□□ 1.35
NR1H3-229ENST00000527464 FAM98CQ17RN3 349 aaKnown RBP23.47■■□□□ 1.35
NR1H3-229ENST00000527464 COL5A2P05997 1499 aaPredicted RBP23.47■■□□□ 1.35
NR1H3-229ENST00000527464 ABCC6O95255 1503 aa23.47■■□□□ 1.35
NR1H3-229ENST00000527464 BRWD3Q6RI45 1802 aa23.47■■□□□ 1.35
NR1H3-229ENST00000527464 OVOS2A0A0J9YW53 1432 aa23.46■■□□□ 1.35
NR1H3-229ENST00000527464 ZBTB7CA1YPR0 619 aa23.46■■□□□ 1.35
NR1H3-229ENST00000527464 OVOS2Q6IE36 1432 aa23.46■■□□□ 1.35
NR1H3-229ENST00000527464 SOX12O15370 315 aa23.44■■□□□ 1.34
NR1H3-229ENST00000527464 LARP1Q6PKG0 1096 aaKnown RBP23.44■■□□□ 1.34
NR1H3-229ENST00000527464 BARGINQ6ZT62 677 aa23.44■■□□□ 1.34
NR1H3-229ENST00000527464 THRAP3Q9Y2W1 955 aaKnown RBP23.44■■□□□ 1.34
NR1H3-229ENST00000527464 MYOM1P52179 1685 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms