RNA–Protein interactions for RNA: ENST00000527273.5

RPS3-208, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-208ENST00000527273 TOPAZ1Q8N9V7 1692 aa16.78■□□□□ 0.28
RPS3-208ENST00000527273 COL14A1Q05707 1796 aaKnown RBP16.77■□□□□ 0.28
RPS3-208ENST00000527273 SEPT12Q8IYM1 358 aa16.76■□□□□ 0.27
RPS3-208ENST00000527273 BTG4Q9NY30 223 aa16.76■□□□□ 0.27
RPS3-208ENST00000527273 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
RPS3-208ENST00000527273 SRCAPQ6ZRS2 3230 aa16.74■□□□□ 0.27
RPS3-208ENST00000527273 QRICH2Q9H0J4 1663 aa16.73■□□□□ 0.27
RPS3-208ENST00000527273 A0A0G2JS52 829 aa16.72■□□□□ 0.27
RPS3-208ENST00000527273 MYT1Q01538 1121 aa16.72■□□□□ 0.27
RPS3-208ENST00000527273 NUTM2GQ5VZR2 741 aa16.72■□□□□ 0.27
RPS3-208ENST00000527273 CCDC125Q86Z20 511 aa16.72■□□□□ 0.27
RPS3-208ENST00000527273 L3MBTL2Q969R5 705 aa16.72■□□□□ 0.27
RPS3-208ENST00000527273 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
RPS3-208ENST00000527273 ACEP12821 1306 aa16.71■□□□□ 0.27
RPS3-208ENST00000527273 ONECUT3O60422 494 aaPredicted RBP16.71■□□□□ 0.27
RPS3-208ENST00000527273 FAM98CQ17RN3 349 aaKnown RBP16.71■□□□□ 0.27
RPS3-208ENST00000527273 NBPF8Q3BBV2 869 aa16.71■□□□□ 0.27
RPS3-208ENST00000527273 CCDC61Q9Y6R9 512 aa16.71■□□□□ 0.27
RPS3-208ENST00000527273 CENPJQ9HC77 1338 aaPredicted RBP16.7■□□□□ 0.26
RPS3-208ENST00000527273 POLR3AO14802 1390 aaPredicted RBP16.7■□□□□ 0.26
RPS3-208ENST00000527273 KRT27Q7Z3Y8 459 aa16.7■□□□□ 0.26
RPS3-208ENST00000527273 PRDM11Q9NQV5 511 aa16.7■□□□□ 0.26
RPS3-208ENST00000527273 BLMP54132 1417 aaPredicted RBP16.7■□□□□ 0.26
RPS3-208ENST00000527273 SRPK2P78362 688 aaKnown RBP16.69■□□□□ 0.26
RPS3-208ENST00000527273 NEUROD1Q13562 356 aa16.69■□□□□ 0.26
RPS3-208ENST00000527273 TRPM1Q7Z4N2 1603 aa16.69■□□□□ 0.26
RPS3-208ENST00000527273 KIAA0232Q92628 1395 aa16.68■□□□□ 0.26
RPS3-208ENST00000527273 PLEKHG3A1L390 1219 aa16.68■□□□□ 0.26
RPS3-208ENST00000527273 ZC3H6P61129 1189 aaKnown RBP16.68■□□□□ 0.26
RPS3-208ENST00000527273 CHRNA2Q15822 529 aa16.68■□□□□ 0.26
RPS3-208ENST00000527273 CABP2Q9NPB3 220 aa16.68■□□□□ 0.26
RPS3-208ENST00000527273 PPIP5K1Q6PFW1 1433 aa16.68■□□□□ 0.26
RPS3-208ENST00000527273 DEFB132Q7Z7B7 95 aa16.67■□□□□ 0.26
RPS3-208ENST00000527273 ZRANB1Q9UGI0 708 aa16.67■□□□□ 0.26
RPS3-208ENST00000527273 SPATA31A5Q5VU36 1347 aa16.66■□□□□ 0.26
RPS3-208ENST00000527273 SPATA31A7Q8IWB4 1347 aa16.66■□□□□ 0.26
RPS3-208ENST00000527273 NRKQ7Z2Y5 1582 aa16.65■□□□□ 0.26
RPS3-208ENST00000527273 SF3B2Q13435 895 aaKnown RBP16.65■□□□□ 0.26
RPS3-208ENST00000527273 ABTB2Q8N961 1025 aa16.65■□□□□ 0.26
RPS3-208ENST00000527273 STRN4Q9NRL3 753 aa16.65■□□□□ 0.26
RPS3-208ENST00000527273 FAM182BQ5T319 152 aa16.64■□□□□ 0.25
RPS3-208ENST00000527273 THSD7AQ9UPZ6 1657 aa16.63■□□□□ 0.25
RPS3-208ENST00000527273 CABP1Q9NZU7 370 aa16.61■□□□□ 0.25
RPS3-208ENST00000527273 SPATA31A1Q5TZJ5 1347 aa16.61■□□□□ 0.25
RPS3-208ENST00000527273 ROCK2O75116 1388 aaKnown RBP16.61■□□□□ 0.25
RPS3-208ENST00000527273 LMO7Q8WWI1 1683 aa16.6■□□□□ 0.25
RPS3-208ENST00000527273 CAMTA1Q9Y6Y1 1673 aa16.6■□□□□ 0.25
RPS3-208ENST00000527273 RGPD1P0DJD0 1748 aa16.6■□□□□ 0.25
RPS3-208ENST00000527273 USP35Q9P2H5 1018 aa16.6■□□□□ 0.25
RPS3-208ENST00000527273 USP19O94966 1318 aa16.6■□□□□ 0.25
RPS3-208ENST00000527273 EVA1CP58658 441 aa16.59■□□□□ 0.25
RPS3-208ENST00000527273 NLRP13Q86W25 1043 aa16.59■□□□□ 0.25
RPS3-208ENST00000527273 EVC2Q86UK5 1308 aa16.59■□□□□ 0.25
RPS3-208ENST00000527273 USP6P35125 1406 aa16.58■□□□□ 0.24
RPS3-208ENST00000527273 SSH2Q76I76 1423 aa16.58■□□□□ 0.24
RPS3-208ENST00000527273 TNS1Q9HBL0 1735 aaKnown RBP16.57■□□□□ 0.24
RPS3-208ENST00000527273 PIK3C2AO00443 1686 aa16.57■□□□□ 0.24
RPS3-208ENST00000527273 CPDO75976 1380 aa16.57■□□□□ 0.24
RPS3-208ENST00000527273 GCP02774 474 aa16.57■□□□□ 0.24
RPS3-208ENST00000527273 AKAP12Q02952 1782 aa16.56■□□□□ 0.24
RPS3-208ENST00000527273 BRD4O60885 1362 aaPredicted RBP16.56■□□□□ 0.24
RPS3-208ENST00000527273 ZBTB7CA1YPR0 619 aa16.56■□□□□ 0.24
RPS3-208ENST00000527273 BAG6P46379 1132 aa16.56■□□□□ 0.24
RPS3-208ENST00000527273 NLRP6P59044 892 aa16.56■□□□□ 0.24
RPS3-208ENST00000527273 LARP1Q6PKG0 1096 aaKnown RBP16.56■□□□□ 0.24
RPS3-208ENST00000527273 SLIT3O75094 1523 aa16.54■□□□□ 0.24
RPS3-208ENST00000527273 EN1Q05925 392 aaPredicted RBP16.53■□□□□ 0.24
RPS3-208ENST00000527273 COL5A2P05997 1499 aaPredicted RBP16.53■□□□□ 0.24
RPS3-208ENST00000527273 RGPD5Q99666 1765 aa16.52■□□□□ 0.24
RPS3-208ENST00000527273 BARGINQ6ZT62 677 aa16.52■□□□□ 0.24
RPS3-208ENST00000527273 COL18A1P39060 1754 aa16.51■□□□□ 0.23
RPS3-208ENST00000527273 TCP11L2Q8N4U5 519 aa16.51■□□□□ 0.23
RPS3-208ENST00000527273 PSDA5PKW4 1024 aaPredicted RBP16.5■□□□□ 0.23
RPS3-208ENST00000527273 TRIM37O94972 964 aa16.5■□□□□ 0.23
RPS3-208ENST00000527273 PDE3BQ13370 1112 aa16.5■□□□□ 0.23
RPS3-208ENST00000527273 FAM196AQ6ZSG2 479 aa16.5■□□□□ 0.23
RPS3-208ENST00000527273 TTC21BQ7Z4L5 1316 aa16.49■□□□□ 0.23
RPS3-208ENST00000527273 MON2Q7Z3U7 1717 aa16.49■□□□□ 0.23
RPS3-208ENST00000527273 ZNF692Q9BU19 519 aaPredicted RBP16.49■□□□□ 0.23
RPS3-208ENST00000527273 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
RPS3-208ENST00000527273 PARP4Q9UKK3 1724 aaKnown RBP16.49■□□□□ 0.23
RPS3-208ENST00000527273 TONSLQ96HA7 1378 aa16.49■□□□□ 0.23
RPS3-208ENST00000527273 CRB1P82279 1406 aa16.48■□□□□ 0.23
RPS3-208ENST00000527273 SOX12O15370 315 aa16.48■□□□□ 0.23
RPS3-208ENST00000527273 EZH2Q15910 746 aaKnown RBP16.48■□□□□ 0.23
RPS3-208ENST00000527273 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
RPS3-208ENST00000527273 KTN1Q86UP2 1357 aaKnown RBP16.48■□□□□ 0.23
RPS3-208ENST00000527273 CPSF1Q10570 1443 aaKnown RBP16.47■□□□□ 0.23
RPS3-208ENST00000527273 THRAP3Q9Y2W1 955 aaKnown RBP16.47■□□□□ 0.23
RPS3-208ENST00000527273 DISP2A7MBM2 1401 aa16.46■□□□□ 0.23
RPS3-208ENST00000527273 AXIN2Q9Y2T1 843 aa16.46■□□□□ 0.23
RPS3-208ENST00000527273 WNK3Q9BYP7 1800 aa16.46■□□□□ 0.23
RPS3-208ENST00000527273 SBNO2Q9Y2G9 1366 aa16.46■□□□□ 0.23
RPS3-208ENST00000527273 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
RPS3-208ENST00000527273 APBA3O96018 575 aa16.45■□□□□ 0.22
RPS3-208ENST00000527273 TOM1L2Q6ZVM7 507 aa16.44■□□□□ 0.22
RPS3-208ENST00000527273 ARHGEF25Q86VW2 580 aa16.44■□□□□ 0.22
RPS3-208ENST00000527273 CAMKK2Q96RR4 588 aa16.44■□□□□ 0.22
RPS3-208ENST00000527273 LRRC37A3O60309 1634 aa16.44■□□□□ 0.22
RPS3-208ENST00000527273 LRP5O75197 1615 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms