RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 RETREG3Q86VR2 466 aa7.12□□□□□ -1.27
CLNS1A-208ENST00000527265 PHOX2BQ99453 314 aa7.12□□□□□ -1.27
CLNS1A-208ENST00000527265 HOXA2O43364 376 aa7.11□□□□□ -1.27
CLNS1A-208ENST00000527265 SVOPQ8N4V2 548 aa7.11□□□□□ -1.27
CLNS1A-208ENST00000527265 MPNDQ8N594 471 aa7.11□□□□□ -1.27
CLNS1A-208ENST00000527265 MS4A1P11836 297 aa7.1□□□□□ -1.27
CLNS1A-208ENST00000527265 C6orf118Q5T5N4 469 aa7.1□□□□□ -1.27
CLNS1A-208ENST00000527265 KANK3Q6NY19 840 aa7.1□□□□□ -1.27
CLNS1A-208ENST00000527265 HLA-CQ95604 372 aa7.1□□□□□ -1.27
CLNS1A-208ENST00000527265 CNTNAP3BQ96NU0 1288 aa7.1□□□□□ -1.27
CLNS1A-208ENST00000527265 CNTNAP3Q9BZ76 1288 aa7.1□□□□□ -1.27
CLNS1A-208ENST00000527265 GPR37O15354 613 aa7.09□□□□□ -1.27
CLNS1A-208ENST00000527265 IRS1P35568 1242 aa7.09□□□□□ -1.27
CLNS1A-208ENST00000527265 MARSP56192 900 aaKnown RBP7.09□□□□□ -1.27
CLNS1A-208ENST00000527265 LINC01559Q495D7 138 aa7.09□□□□□ -1.27
CLNS1A-208ENST00000527265 XP32Q5T750 250 aa7.09□□□□□ -1.27
CLNS1A-208ENST00000527265 UNC93B1Q9H1C4 597 aa7.09□□□□□ -1.27
CLNS1A-208ENST00000527265 BMP2P12643 396 aa7.08□□□□□ -1.28
CLNS1A-208ENST00000527265 ZIC2O95409 532 aaPredicted RBP7.07□□□□□ -1.28
CLNS1A-208ENST00000527265 ZNF511Q8NB15 262 aa7.07□□□□□ -1.28
CLNS1A-208ENST00000527265 FAM174AQ8TBP5 190 aa7.07□□□□□ -1.28
CLNS1A-208ENST00000527265 BAP1Q92560 729 aa7.07□□□□□ -1.28
CLNS1A-208ENST00000527265 SYMPKQ92797 1274 aaKnown RBP7.07□□□□□ -1.28
CLNS1A-208ENST00000527265 GUCA2AQ02747 115 aa7.06□□□□□ -1.28
CLNS1A-208ENST00000527265 PTPRNQ16849 979 aa7.06□□□□□ -1.28
CLNS1A-208ENST00000527265 SCARF2Q96GP6 870 aaPredicted RBP7.06□□□□□ -1.28
CLNS1A-208ENST00000527265 TESPA1A2RU30 521 aaPredicted RBP7.05□□□□□ -1.28
CLNS1A-208ENST00000527265 C6orf229H3BNL8 230 aa7.05□□□□□ -1.28
CLNS1A-208ENST00000527265 NUTM1Q86Y26 1132 aa7.05□□□□□ -1.28
CLNS1A-208ENST00000527265 ARID5BQ14865 1188 aa7.04□□□□□ -1.28
CLNS1A-208ENST00000527265 COL25A1Q9BXS0 654 aaPredicted RBP7.04□□□□□ -1.28
CLNS1A-208ENST00000527265 EVA1BQ9NVM1 165 aa7.04□□□□□ -1.28
CLNS1A-208ENST00000527265 KRT76Q01546 638 aa7.03□□□□□ -1.28
CLNS1A-208ENST00000527265 KCNH2Q12809 1159 aa7.03□□□□□ -1.28
CLNS1A-208ENST00000527265 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.03□□□□□ -1.282e-16■□□□□ 10
CLNS1A-208ENST00000527265 ZNF385CQ66K41 422 aaPredicted RBP7.03□□□□□ -1.28
CLNS1A-208ENST00000527265 GPIHBP1Q8IV16 184 aa7.03□□□□□ -1.28
CLNS1A-208ENST00000527265 LINC00528Q8N1L1 170 aa7.03□□□□□ -1.28
CLNS1A-208ENST00000527265 KLF16Q9BXK1 252 aaPredicted RBP7.03□□□□□ -1.28
CLNS1A-208ENST00000527265 ZFAND3Q9H8U3 227 aa7.03□□□□□ -1.28
CLNS1A-208ENST00000527265 SPTLC1O15269 473 aa7.02□□□□□ -1.29
CLNS1A-208ENST00000527265 NR5A1Q13285 461 aa7.02□□□□□ -1.29
CLNS1A-208ENST00000527265 ITPKCQ96DU7 683 aa7.02□□□□□ -1.29
CLNS1A-208ENST00000527265 MDM2Q00987 491 aaPredicted RBP7.01□□□□□ -1.29
CLNS1A-208ENST00000527265 DNMT3LQ9UJW3 386 aa7.01□□□□□ -1.29
CLNS1A-208ENST00000527265 MSTNO14793 375 aa7□□□□□ -1.29
CLNS1A-208ENST00000527265 FDX1P10109 184 aa7□□□□□ -1.29
CLNS1A-208ENST00000527265 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7□□□□□ -1.29
CLNS1A-208ENST00000527265 GPR161Q8N6U8 529 aaKnown RBP7□□□□□ -1.29
CLNS1A-208ENST00000527265 SOS2Q07890 1332 aaPredicted RBP7□□□□□ -1.29
CLNS1A-208ENST00000527265 ADAM23O75077 832 aa6.99□□□□□ -1.29
CLNS1A-208ENST00000527265 RANGAP1P46060 587 aaPredicted RBP6.99□□□□□ -1.29
CLNS1A-208ENST00000527265 MAP3K10Q02779 954 aa6.99□□□□□ -1.29
CLNS1A-208ENST00000527265 MEIOBQ8N635 442 aa6.99□□□□□ -1.29
CLNS1A-208ENST00000527265 NANOS1Q8WY41 292 aaKnown RBP6.99□□□□□ -1.29
CLNS1A-208ENST00000527265 CDK15Q96Q40 435 aa6.99□□□□□ -1.29
CLNS1A-208ENST00000527265 TSEN34Q9BSV6 310 aaKnown RBP6.99□□□□□ -1.29
CLNS1A-208ENST00000527265 PODXL2Q9NZ53 605 aa6.99□□□□□ -1.29
CLNS1A-208ENST00000527265 PTSQ03393 145 aa6.98□□□□□ -1.29
CLNS1A-208ENST00000527265 MAP2K5Q13163 448 aa6.98□□□□□ -1.29
CLNS1A-208ENST00000527265 TTLL8A6PVC2 850 aa6.97□□□□□ -1.29
CLNS1A-208ENST00000527265 SLURP2P0DP57 97 aa6.97□□□□□ -1.29
CLNS1A-208ENST00000527265 CTHP32929 405 aa6.97□□□□□ -1.29
CLNS1A-208ENST00000527265 AGERQ15109 404 aa6.97□□□□□ -1.29
CLNS1A-208ENST00000527265 GALNT6Q8NCL4 622 aa6.97□□□□□ -1.29
CLNS1A-208ENST00000527265 ARHGEF15O94989 841 aa6.96□□□□□ -1.3
CLNS1A-208ENST00000527265 KRI1Q8N9T8 703 aaKnown RBP6.96□□□□□ -1.3
CLNS1A-208ENST00000527265 ENAMQ9NRM1 1142 aa6.96□□□□□ -1.3
CLNS1A-208ENST00000527265 CDC14CA4D256 554 aa6.95□□□□□ -1.3
CLNS1A-208ENST00000527265 SPDYE5A6NIY4 337 aa6.95□□□□□ -1.3
CLNS1A-208ENST00000527265 CLCN1P35523 988 aa6.95□□□□□ -1.3
CLNS1A-208ENST00000527265 RNFT1Q5M7Z0 435 aa6.95□□□□□ -1.3
CLNS1A-208ENST00000527265 DESI1Q6ICB0 168 aa6.95□□□□□ -1.3
CLNS1A-208ENST00000527265 PRR7Q8TB68 274 aa6.95□□□□□ -1.3
CLNS1A-208ENST00000527265 GPCPD1Q9NPB8 672 aa6.95□□□□□ -1.3
CLNS1A-208ENST00000527265 PHF20L1A8MW92 1017 aa6.94□□□□□ -1.3
CLNS1A-208ENST00000527265 SUPT5HO00267 1087 aaKnown RBP6.94□□□□□ -1.3
CLNS1A-208ENST00000527265 NR3C2P08235 984 aa6.94□□□□□ -1.3
CLNS1A-208ENST00000527265 SV2AQ7L0J3 742 aa6.94□□□□□ -1.3
CLNS1A-208ENST00000527265 CCDC155Q8N6L0 562 aa6.94□□□□□ -1.3
CLNS1A-208ENST00000527265 WHAMMQ8TF30 809 aa6.94□□□□□ -1.3
CLNS1A-208ENST00000527265 PCDHGC3Q9UN70 934 aa6.93□□□□□ -1.3
CLNS1A-208ENST00000527265 PLA2G4EQ3MJ16 856 aa6.92□□□□□ -1.3
CLNS1A-208ENST00000527265 PODNQ7Z5L7 613 aa6.92□□□□□ -1.3
CLNS1A-208ENST00000527265 BPHLQ86WA6 291 aaPredicted RBP6.92□□□□□ -1.3
CLNS1A-208ENST00000527265 SPOCK3Q9BQ16 436 aa6.92□□□□□ -1.3
CLNS1A-208ENST00000527265 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
CLNS1A-208ENST00000527265 FAM217BQ9NTX9 383 aaPredicted RBP6.92□□□□□ -1.3
CLNS1A-208ENST00000527265 EMILIN1Q9Y6C2 1016 aa6.92□□□□□ -1.3
CLNS1A-208ENST00000527265 IRF6O14896 467 aa6.91□□□□□ -1.3
CLNS1A-208ENST00000527265 ITGA6P23229 1130 aa6.91□□□□□ -1.3
CLNS1A-208ENST00000527265 MTMR2Q13614 643 aa6.91□□□□□ -1.3
CLNS1A-208ENST00000527265 VWA5B2Q8N398 1253 aa6.91□□□□□ -1.3
CLNS1A-208ENST00000527265 FOXJ1Q92949 421 aa6.91□□□□□ -1.3
CLNS1A-208ENST00000527265 FIGNL2A6NMB9 653 aa6.9□□□□□ -1.3
CLNS1A-208ENST00000527265 ADAMTS2O95450 1211 aa6.9□□□□□ -1.3
CLNS1A-208ENST00000527265 FSHRP23945 695 aa6.9□□□□□ -1.3
CLNS1A-208ENST00000527265 GRM5P41594 1212 aa6.9□□□□□ -1.3
CLNS1A-208ENST00000527265 ZC3H15Q8WU90 426 aaKnown RBP6.9□□□□□ -1.3
CLNS1A-208ENST00000527265 K7ELQ4 463 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms