RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 IBTKQ9P2D0 1353 aaPredicted RBP11.79□□□□□ -0.52
SCN3B-203ENST00000527125 GOLGA6L3A6NEY3 463 aa11.79□□□□□ -0.52
SCN3B-203ENST00000527125 MRE11P49959 708 aa11.79□□□□□ -0.52
SCN3B-203ENST00000527125 C22orf23Q9BZE7 217 aa11.79□□□□□ -0.52
SCN3B-203ENST00000527125 ABCC11Q96J66 1382 aa11.79□□□□□ -0.52
SCN3B-203ENST00000527125 SETD1AO15047 1707 aaKnown RBP11.79□□□□□ -0.52
SCN3B-203ENST00000527125 TRAK2O60296 914 aa11.78□□□□□ -0.52
SCN3B-203ENST00000527125 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
SCN3B-203ENST00000527125 NPATQ14207 1427 aa11.78□□□□□ -0.52
SCN3B-203ENST00000527125 ZBTB40Q9NUA8 1239 aa11.78□□□□□ -0.52
SCN3B-203ENST00000527125 ZFYVE9O95405 1425 aa11.77□□□□□ -0.53
SCN3B-203ENST00000527125 LRRC7Q96NW7 1537 aa11.77□□□□□ -0.53
SCN3B-203ENST00000527125 RAB3GAP1Q15042 981 aa11.77□□□□□ -0.53
SCN3B-203ENST00000527125 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
SCN3B-203ENST00000527125 PTCH1Q13635 1447 aa11.77□□□□□ -0.53
SCN3B-203ENST00000527125 TRIM27P14373 513 aa11.77□□□□□ -0.53
SCN3B-203ENST00000527125 AFAP1Q8N556 730 aa11.77□□□□□ -0.53
SCN3B-203ENST00000527125 PKNOX2Q96KN3 472 aa11.77□□□□□ -0.53
SCN3B-203ENST00000527125 PTPRMP28827 1452 aa11.76□□□□□ -0.53
SCN3B-203ENST00000527125 NUCB1Q02818 461 aa11.76□□□□□ -0.53
SCN3B-203ENST00000527125 GAS2L3Q86XJ1 694 aa11.76□□□□□ -0.53
SCN3B-203ENST00000527125 ZKSCAN2Q63HK3 967 aa11.76□□□□□ -0.53
SCN3B-203ENST00000527125 DZIP1LQ8IYY4 767 aaKnown RBP11.75□□□□□ -0.53
SCN3B-203ENST00000527125 GRPEL1Q9HAV7 217 aa11.75□□□□□ -0.53
SCN3B-203ENST00000527125 PODXL2Q9NZ53 605 aa11.75□□□□□ -0.53
SCN3B-203ENST00000527125 PPP1R9BQ96SB3 815 aa11.75□□□□□ -0.53
SCN3B-203ENST00000527125 MYH16Q9H6N6 1097 aa11.75□□□□□ -0.53
SCN3B-203ENST00000527125 TMEM131LA2VDJ0 1609 aa11.74□□□□□ -0.53
SCN3B-203ENST00000527125 MTHFSP49914 203 aa11.74□□□□□ -0.53
SCN3B-203ENST00000527125 MLH3Q9UHC1 1453 aa11.74□□□□□ -0.53
SCN3B-203ENST00000527125 DDX11L8A8MPP1 907 aa11.74□□□□□ -0.53
SCN3B-203ENST00000527125 SLC12A5Q9H2X9 1139 aa11.74□□□□□ -0.53
SCN3B-203ENST00000527125 UPF2Q9HAU5 1272 aaKnown RBP11.74□□□□□ -0.53
SCN3B-203ENST00000527125 AK9Q5TCS8 1911 aa11.74□□□□□ -0.53
SCN3B-203ENST00000527125 RRP7AQ9Y3A4 280 aaKnown RBP11.73□□□□□ -0.53
SCN3B-203ENST00000527125 RRP9O43818 475 aaKnown RBP11.73□□□□□ -0.53
SCN3B-203ENST00000527125 N4BP2Q86UW6 1770 aaPredicted RBP11.73□□□□□ -0.53
SCN3B-203ENST00000527125 FAM135BQ49AJ0 1406 aa11.73□□□□□ -0.53
SCN3B-203ENST00000527125 MAP2P11137 1827 aaKnown RBP11.73□□□□□ -0.53
SCN3B-203ENST00000527125 MORC1Q86VD1 984 aa11.73□□□□□ -0.53
SCN3B-203ENST00000527125 RPGRIP1LQ68CZ1 1315 aa11.73□□□□□ -0.53
SCN3B-203ENST00000527125 ATF7IPQ6VMQ6 1270 aa11.72□□□□□ -0.53
SCN3B-203ENST00000527125 SSH1Q8WYL5 1049 aa11.72□□□□□ -0.53
SCN3B-203ENST00000527125 TNPO1Q92973 898 aaKnown RBP11.72□□□□□ -0.53
SCN3B-203ENST00000527125 ASXL2Q76L83 1435 aa11.72□□□□□ -0.53
SCN3B-203ENST00000527125 DDX19BQ9UMR2 479 aa11.72□□□□□ -0.53
SCN3B-203ENST00000527125 CFAP65Q6ZU64 1925 aaKnown RBP11.71□□□□□ -0.53
SCN3B-203ENST00000527125 RIMBP3CA6NJZ7 1639 aa11.71□□□□□ -0.53
SCN3B-203ENST00000527125 RIMBP3BA6NNM3 1639 aa11.71□□□□□ -0.53
SCN3B-203ENST00000527125 RIMBP3Q9UFD9 1639 aa11.71□□□□□ -0.53
SCN3B-203ENST00000527125 BMP2KLQ5H9B9 411 aa11.71□□□□□ -0.53
SCN3B-203ENST00000527125 CD2BP2O95400 341 aaKnown RBP11.71□□□□□ -0.54
SCN3B-203ENST00000527125 CYP2E1P05181 493 aaPredicted RBP11.71□□□□□ -0.54
SCN3B-203ENST00000527125 A0A1W2PP64 1363 aa11.7□□□□□ -0.54
SCN3B-203ENST00000527125 KIF16BQ96L93 1317 aa11.7□□□□□ -0.54
SCN3B-203ENST00000527125 ESPNB1AK53 854 aa11.7□□□□□ -0.54
SCN3B-203ENST00000527125 ALDH1L2Q3SY69 923 aa11.7□□□□□ -0.54
SCN3B-203ENST00000527125 BCL2L13Q9BXK5 485 aa11.7□□□□□ -0.54
SCN3B-203ENST00000527125 NRKQ7Z2Y5 1582 aa11.7□□□□□ -0.54
SCN3B-203ENST00000527125 PREX1Q8TCU6 1659 aa11.7□□□□□ -0.54
SCN3B-203ENST00000527125 TMPOP42166 694 aaKnown RBP11.7□□□□□ -0.54
SCN3B-203ENST00000527125 CANXP27824 592 aaKnown RBP11.69□□□□□ -0.54
SCN3B-203ENST00000527125 MON2Q7Z3U7 1717 aa11.69□□□□□ -0.54
SCN3B-203ENST00000527125 EXOSC9Q06265 439 aaKnown RBP11.69□□□□□ -0.54
SCN3B-203ENST00000527125 ARHGEF40Q8TER5 1519 aa11.69□□□□□ -0.54
SCN3B-203ENST00000527125 TMEM57Q8N5G2 664 aa11.68□□□□□ -0.54
SCN3B-203ENST00000527125 PNNQ9H307 717 aaKnown RBP11.68□□□□□ -0.54
SCN3B-203ENST00000527125 AKAP12Q02952 1782 aa11.68□□□□□ -0.54
SCN3B-203ENST00000527125 POGZQ7Z3K3 1410 aa11.67□□□□□ -0.54
SCN3B-203ENST00000527125 ZBTB7BO15156 539 aaPredicted RBP11.67□□□□□ -0.54
SCN3B-203ENST00000527125 TERF1P54274 439 aa11.67□□□□□ -0.54
SCN3B-203ENST00000527125 MFAP1P55081 439 aaKnown RBP11.67□□□□□ -0.54
SCN3B-203ENST00000527125 TSR2Q969E8 191 aaKnown RBP11.67□□□□□ -0.54
SCN3B-203ENST00000527125 NOB1Q9ULX3 412 aaKnown RBP11.67□□□□□ -0.54
SCN3B-203ENST00000527125 RICTORQ6R327 1708 aa11.67□□□□□ -0.54
SCN3B-203ENST00000527125 RGPD1P0DJD0 1748 aa11.67□□□□□ -0.54
SCN3B-203ENST00000527125 SKOR2Q2VWA4 1001 aaPredicted RBP11.67□□□□□ -0.54
SCN3B-203ENST00000527125 KIF24Q5T7B8 1368 aa11.67□□□□□ -0.54
SCN3B-203ENST00000527125 DIP2CQ9Y2E4 1556 aa11.67□□□□□ -0.54
SCN3B-203ENST00000527125 SIRT2Q8IXJ6 389 aa11.66□□□□□ -0.54
SCN3B-203ENST00000527125 PTMSP20962 102 aa11.66□□□□□ -0.54
SCN3B-203ENST00000527125 CHD1LQ86WJ1 897 aa11.66□□□□□ -0.54
SCN3B-203ENST00000527125 PDLIM2Q96JY6 352 aa11.66□□□□□ -0.54
SCN3B-203ENST00000527125 ABCC4O15439 1325 aa11.66□□□□□ -0.54
SCN3B-203ENST00000527125 KIF3BO15066 747 aa11.66□□□□□ -0.54
SCN3B-203ENST00000527125 ARHGAP45Q92619 1136 aa11.66□□□□□ -0.54
SCN3B-203ENST00000527125 DLC1Q96QB1 1528 aa11.66□□□□□ -0.54
SCN3B-203ENST00000527125 ZNF445P59923 1031 aa11.65□□□□□ -0.54
SCN3B-203ENST00000527125 HSCBQ8IWL3 235 aa11.65□□□□□ -0.54
SCN3B-203ENST00000527125 ZNF428Q96B54 188 aa11.65□□□□□ -0.54
SCN3B-203ENST00000527125 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
SCN3B-203ENST00000527125 C3P01024 1663 aa11.65□□□□□ -0.54
SCN3B-203ENST00000527125 RGS12O14924 1447 aa11.65□□□□□ -0.54
SCN3B-203ENST00000527125 CFAP53Q96M91 514 aa11.64□□□□□ -0.55
SCN3B-203ENST00000527125 ZNF853P0CG23 659 aa11.64□□□□□ -0.55
SCN3B-203ENST00000527125 NEUROD2Q15784 382 aa11.64□□□□□ -0.55
SCN3B-203ENST00000527125 GZF1Q9H116 711 aaPredicted RBP11.64□□□□□ -0.55
SCN3B-203ENST00000527125 KLHL40Q2TBA0 621 aa11.64□□□□□ -0.55
SCN3B-203ENST00000527125 TPM2P07951 284 aa11.63□□□□□ -0.55
SCN3B-203ENST00000527125 SPRYD3Q8NCJ5 442 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms