RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 CFAP53Q96M91 514 aa27.44■■□□□ 1.98
SMCO4-203ENST00000526869 C14orf37Q86TY3 774 aa27.43■■□□□ 1.98
SMCO4-203ENST00000526869 SHPRHQ149N8 1683 aa27.43■■□□□ 1.98
SMCO4-203ENST00000526869 TNNT2P45379 298 aaPredicted RBP27.42■■□□□ 1.98
SMCO4-203ENST00000526869 NGDNQ8NEJ9 315 aaKnown RBP27.42■■□□□ 1.98
SMCO4-203ENST00000526869 C19orf44Q9H6X5 657 aa27.42■■□□□ 1.98
SMCO4-203ENST00000526869 TMEM94Q12767 1356 aa27.41■■□□□ 1.98
SMCO4-203ENST00000526869 AATKQ6ZMQ8 1374 aa27.41■■□□□ 1.98
SMCO4-203ENST00000526869 MTHFSP49914 203 aa27.41■■□□□ 1.98
SMCO4-203ENST00000526869 NME9Q86XW9 330 aa27.41■■□□□ 1.98
SMCO4-203ENST00000526869 OVOS2A0A0J9YW53 1432 aa27.41■■□□□ 1.98
SMCO4-203ENST00000526869 OVOS2Q6IE36 1432 aa27.41■■□□□ 1.98
SMCO4-203ENST00000526869 SMG6Q86US8 1419 aaKnown RBP27.4■■□□□ 1.98
SMCO4-203ENST00000526869 PMFBP1Q8TBY8 1022 aa27.39■■□□□ 1.98
SMCO4-203ENST00000526869 RBM33Q96EV2 1170 aaKnown RBP27.39■■□□□ 1.98
SMCO4-203ENST00000526869 COG3Q96JB2 828 aa27.39■■□□□ 1.98
SMCO4-203ENST00000526869 PHF8Q9UPP1 1060 aa27.39■■□□□ 1.98
SMCO4-203ENST00000526869 USP54Q70EL1 1684 aa27.39■■□□□ 1.97
SMCO4-203ENST00000526869 KIF1AQ12756 1690 aa27.38■■□□□ 1.97
SMCO4-203ENST00000526869 COL3A1P02461 1466 aaPredicted RBP27.38■■□□□ 1.97
SMCO4-203ENST00000526869 ADAMTS8Q9UP79 889 aa27.37■■□□□ 1.97
SMCO4-203ENST00000526869 DMRT2Q9Y5R5 561 aa27.37■■□□□ 1.97
SMCO4-203ENST00000526869 LRRC7Q96NW7 1537 aa27.36■■□□□ 1.97
SMCO4-203ENST00000526869 USP31Q70CQ4 1352 aa27.36■■□□□ 1.97
SMCO4-203ENST00000526869 PNPLA6Q8IY17 1366 aa27.35■■□□□ 1.97
SMCO4-203ENST00000526869 C1orf167Q5SNV9 1468 aa27.33■■□□□ 1.97
SMCO4-203ENST00000526869 PIK3C2AO00443 1686 aa27.33■■□□□ 1.97
SMCO4-203ENST00000526869 XIRP1Q702N8 1843 aaKnown RBP27.32■■□□□ 1.96
SMCO4-203ENST00000526869 CDK12Q9NYV4 1490 aaPredicted RBP27.32■■□□□ 1.96
SMCO4-203ENST00000526869 MST1RQ04912 1400 aa27.31■■□□□ 1.96
SMCO4-203ENST00000526869 ATF3P18847 181 aa27.3■■□□□ 1.96
SMCO4-203ENST00000526869 ZRANB1Q9UGI0 708 aa27.3■■□□□ 1.96
SMCO4-203ENST00000526869 MSH6P52701 1360 aa27.3■■□□□ 1.96
SMCO4-203ENST00000526869 MAP2P11137 1827 aaKnown RBP27.3■■□□□ 1.96
SMCO4-203ENST00000526869 ESCO1Q5FWF5 840 aa27.29■■□□□ 1.96
SMCO4-203ENST00000526869 POLKQ9UBT6 870 aa27.29■■□□□ 1.96
SMCO4-203ENST00000526869 CADPS2Q86UW7 1296 aa27.27■■□□□ 1.96
SMCO4-203ENST00000526869 NUDCQ9Y266 331 aa27.26■■□□□ 1.95
SMCO4-203ENST00000526869 ZNF335Q9H4Z2 1342 aaPredicted RBP27.25■■□□□ 1.95
SMCO4-203ENST00000526869 NGEFQ8N5V2 710 aa27.25■■□□□ 1.95
SMCO4-203ENST00000526869 MARF1Q9Y4F3 1742 aaKnown RBP27.24■■□□□ 1.95
SMCO4-203ENST00000526869 ORAI2Q96SN7 254 aa27.22■■□□□ 1.95
SMCO4-203ENST00000526869 DIAPH1O60610 1272 aaKnown RBP27.21■■□□□ 1.95
SMCO4-203ENST00000526869 PDE3BQ13370 1112 aa27.21■■□□□ 1.95
SMCO4-203ENST00000526869 TRPM3Q9HCF6 1732 aaPredicted RBP27.21■■□□□ 1.95
SMCO4-203ENST00000526869 PSME1Q06323 249 aa27.2■■□□□ 1.94
SMCO4-203ENST00000526869 EMILIN1Q9Y6C2 1016 aa27.18■■□□□ 1.94
SMCO4-203ENST00000526869 RUNDC1Q96C34 613 aa27.17■■□□□ 1.94
SMCO4-203ENST00000526869 KIF24Q5T7B8 1368 aa27.17■■□□□ 1.94
SMCO4-203ENST00000526869 NLRP6P59044 892 aa27.16■■□□□ 1.94
SMCO4-203ENST00000526869 NCBP3Q53F19 620 aaKnown RBP27.16■■□□□ 1.94
SMCO4-203ENST00000526869 IQSEC2Q5JU85 1478 aa27.16■■□□□ 1.94
SMCO4-203ENST00000526869 ABTB2Q8N961 1025 aa27.15■■□□□ 1.94
SMCO4-203ENST00000526869 PEAK1Q9H792 1746 aa27.14■■□□□ 1.94
SMCO4-203ENST00000526869 U2AF1L5P0DN76 240 aaPredicted RBP27.14■■□□□ 1.94
SMCO4-203ENST00000526869 FBLN1P23142 703 aa27.14■■□□□ 1.94
SMCO4-203ENST00000526869 U2AF1Q01081 240 aaKnown RBP eCLIP27.14■■□□□ 1.94
SMCO4-203ENST00000526869 FOXO3O43524 673 aa27.13■■□□□ 1.93
SMCO4-203ENST00000526869 PAK3O75914 559 aaPredicted RBP27.13■■□□□ 1.93
SMCO4-203ENST00000526869 RRS1Q15050 365 aaKnown RBP27.13■■□□□ 1.93
SMCO4-203ENST00000526869 CCDC146Q8IYE0 955 aa27.13■■□□□ 1.93
SMCO4-203ENST00000526869 SBNO1A3KN83 1393 aa27.12■■□□□ 1.93
SMCO4-203ENST00000526869 PPM1GO15355 546 aaPredicted RBP27.12■■□□□ 1.93
SMCO4-203ENST00000526869 PNNQ9H307 717 aaKnown RBP27.12■■□□□ 1.93
SMCO4-203ENST00000526869 KRT28Q7Z3Y7 464 aa27.11■■□□□ 1.93
SMCO4-203ENST00000526869 ZNF521Q96K83 1311 aa27.11■■□□□ 1.93
SMCO4-203ENST00000526869 ALS2Q96Q42 1657 aa27.11■■□□□ 1.93
SMCO4-203ENST00000526869 SLIT3O75094 1523 aa27.11■■□□□ 1.93
SMCO4-203ENST00000526869 APAF1O14727 1248 aa27.1■■□□□ 1.93
SMCO4-203ENST00000526869 U2SURPO15042 1029 aaKnown RBP27.1■■□□□ 1.93
SMCO4-203ENST00000526869 IL13P35225 146 aa27.1■■□□□ 1.93
SMCO4-203ENST00000526869 NPHP3Q7Z494 1330 aa27.1■■□□□ 1.93
SMCO4-203ENST00000526869 FLT4P35916 1363 aa27.09■■□□□ 1.93
SMCO4-203ENST00000526869 NFAT5O94916 1531 aa27.09■■□□□ 1.93
SMCO4-203ENST00000526869 MAP3K19Q56UN5 1328 aa27.09■■□□□ 1.93
SMCO4-203ENST00000526869 GTF3C3Q9Y5Q9 886 aa27.08■■□□□ 1.93
SMCO4-203ENST00000526869 PHRF1Q9P1Y6 1649 aaKnown RBP27.08■■□□□ 1.93
SMCO4-203ENST00000526869 RTL1A6NKG5 1358 aa27.08■■□□□ 1.93
SMCO4-203ENST00000526869 FCHSD2O94868 740 aa27.07■■□□□ 1.92
SMCO4-203ENST00000526869 PXDNQ92626 1479 aa27.06■■□□□ 1.92
SMCO4-203ENST00000526869 KCNH5Q8NCM2 988 aa27.05■■□□□ 1.92
SMCO4-203ENST00000526869 PLEKHF1Q96S99 279 aa27.05■■□□□ 1.92
SMCO4-203ENST00000526869 SALL2Q9Y467 1007 aaPredicted RBP27.05■■□□□ 1.92
SMCO4-203ENST00000526869 USP19O94966 1318 aa27.05■■□□□ 1.92
SMCO4-203ENST00000526869 RGPD1P0DJD0 1748 aa27.04■■□□□ 1.92
SMCO4-203ENST00000526869 SENP3-EIF4A1A0A087X0R7 540 aa27.04■■□□□ 1.92
SMCO4-203ENST00000526869 CCDC27Q2M243 656 aa27.03■■□□□ 1.92
SMCO4-203ENST00000526869 LTBP4Q8N2S1 1624 aa27.03■■□□□ 1.92
SMCO4-203ENST00000526869 TCP11L2Q8N4U5 519 aa27.03■■□□□ 1.92
SMCO4-203ENST00000526869 NUTM2GQ5VZR2 741 aa27.02■■□□□ 1.92
SMCO4-203ENST00000526869 PHF23Q9BUL5 403 aaPredicted RBP27.02■■□□□ 1.92
SMCO4-203ENST00000526869 RSPH6AQ9H0K4 717 aa27.02■■□□□ 1.92
SMCO4-203ENST00000526869 SLAIN2Q9P270 581 aa27.02■■□□□ 1.92
SMCO4-203ENST00000526869 EIF4A2Q14240 407 aaKnown RBP27.01■■□□□ 1.91
SMCO4-203ENST00000526869 BRINP3Q76B58 766 aa27.01■■□□□ 1.91
SMCO4-203ENST00000526869 TNS3Q68CZ2 1445 aa27■■□□□ 1.91
SMCO4-203ENST00000526869 LTN1O94822 1766 aa27■■□□□ 1.91
SMCO4-203ENST00000526869 MAPK8IP3Q9UPT6 1336 aa27■■□□□ 1.91
SMCO4-203ENST00000526869 XPCQ01831 940 aaPredicted RBP27■■□□□ 1.91
SMCO4-203ENST00000526869 AMPHP49418 695 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms