RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.44□□□□□ -0.9
SF3B2-205ENST00000526653 SALL2Q9Y467 1007 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-205ENST00000526653 KDM5BQ9UGL1 1544 aa9.44□□□□□ -0.9
SF3B2-205ENST00000526653 MAP3K4Q9Y6R4 1608 aa9.43□□□□□ -0.9
SF3B2-205ENST00000526653 CUL7Q14999 1698 aa9.42□□□□□ -0.9
SF3B2-205ENST00000526653 PRR20EP86478 221 aa9.42□□□□□ -0.9
SF3B2-205ENST00000526653 PRR20CP86479 221 aa9.42□□□□□ -0.9
SF3B2-205ENST00000526653 PRR20DP86480 221 aa9.42□□□□□ -0.9
SF3B2-205ENST00000526653 PRR20BP86481 221 aa9.42□□□□□ -0.9
SF3B2-205ENST00000526653 PRR20AP86496 221 aa9.42□□□□□ -0.9
SF3B2-205ENST00000526653 GRIPAP1Q4V328 841 aa9.42□□□□□ -0.9
SF3B2-205ENST00000526653 RNF19BQ6ZMZ0 732 aa9.42□□□□□ -0.9
SF3B2-205ENST00000526653 PRDM9Q9NQV7 894 aa9.42□□□□□ -0.9
SF3B2-205ENST00000526653 FCF1Q9Y324 198 aaKnown RBP9.42□□□□□ -0.9
SF3B2-205ENST00000526653 BIVM-ERCC5R4GMW8 1640 aa9.42□□□□□ -0.9
SF3B2-205ENST00000526653 GDF9O60383 454 aa9.41□□□□□ -0.9
SF3B2-205ENST00000526653 MLECQ14165 292 aa9.41□□□□□ -0.9
SF3B2-205ENST00000526653 MAGI3Q5TCQ9 1506 aa9.41□□□□□ -0.9
SF3B2-205ENST00000526653 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.9
SF3B2-205ENST00000526653 KIF27Q86VH2 1401 aa9.4□□□□□ -0.9
SF3B2-205ENST00000526653 TNFRSF10AO00220 468 aa9.4□□□□□ -0.9
SF3B2-205ENST00000526653 KDM4AO75164 1064 aa9.4□□□□□ -0.9
SF3B2-205ENST00000526653 PCF11O94913 1555 aaKnown RBP9.4□□□□□ -0.9
SF3B2-205ENST00000526653 KIF21BO75037 1637 aa9.39□□□□□ -0.91
SF3B2-205ENST00000526653 MSS51Q4VC12 460 aa9.39□□□□□ -0.91
SF3B2-205ENST00000526653 DISP1Q96F81 1524 aa9.38□□□□□ -0.91
SF3B2-205ENST00000526653 LMOD2Q6P5Q4 547 aa9.38□□□□□ -0.91
SF3B2-205ENST00000526653 GPCPD1Q9NPB8 672 aa9.38□□□□□ -0.91
SF3B2-205ENST00000526653 RPIAP49247 311 aa9.37□□□□□ -0.91
SF3B2-205ENST00000526653 Q3C1V9 767 aa9.37□□□□□ -0.91
SF3B2-205ENST00000526653 PKDCCQ504Y2 493 aa9.37□□□□□ -0.91
SF3B2-205ENST00000526653 HLA-CQ95604 372 aa9.37□□□□□ -0.91
SF3B2-205ENST00000526653 DGAT1O75907 488 aa9.36□□□□□ -0.91
SF3B2-205ENST00000526653 CLCN1P35523 988 aa9.36□□□□□ -0.91
SF3B2-205ENST00000526653 CEBPAP49715 358 aaPredicted RBP9.36□□□□□ -0.91
SF3B2-205ENST00000526653 FAM217BQ9NTX9 383 aaPredicted RBP9.36□□□□□ -0.91
SF3B2-205ENST00000526653 PKD2L1Q9P0L9 805 aa9.36□□□□□ -0.91
SF3B2-205ENST00000526653 ARAP3Q8WWN8 1544 aa9.36□□□□□ -0.91
SF3B2-205ENST00000526653 ZCCHC11Q5TAX3 1644 aaKnown RBP9.35□□□□□ -0.91
SF3B2-205ENST00000526653 FAM187AA6NFU0 413 aa9.35□□□□□ -0.91
SF3B2-205ENST00000526653 USP46P62068 366 aa9.35□□□□□ -0.91
SF3B2-205ENST00000526653 FOXC1Q12948 553 aa9.35□□□□□ -0.91
SF3B2-205ENST00000526653 ADAMTSL3P82987 1691 aa9.35□□□□□ -0.91
SF3B2-205ENST00000526653 HOXA2O43364 376 aa9.34□□□□□ -0.91
SF3B2-205ENST00000526653 CD2BP2O95400 341 aaKnown RBP9.34□□□□□ -0.91
SF3B2-205ENST00000526653 MYT1Q01538 1121 aa9.34□□□□□ -0.91
SF3B2-205ENST00000526653 FAM9AQ8IZU1 332 aaPredicted RBP9.34□□□□□ -0.91
SF3B2-205ENST00000526653 KRI1Q8N9T8 703 aaKnown RBP9.34□□□□□ -0.91
SF3B2-205ENST00000526653 MMP16P51512 607 aa9.33□□□□□ -0.92
SF3B2-205ENST00000526653 ZNF787Q6DD87 383 aa9.33□□□□□ -0.92
SF3B2-205ENST00000526653 USB1Q9BQ65 265 aaKnown RBP9.33□□□□□ -0.92
SF3B2-205ENST00000526653 REPIN1Q9BWE0 567 aaKnown RBP9.33□□□□□ -0.92
SF3B2-205ENST00000526653 GUCA2AQ02747 115 aa9.32□□□□□ -0.92
SF3B2-205ENST00000526653 PHLDB1Q86UU1 1377 aa9.32□□□□□ -0.92
SF3B2-205ENST00000526653 IQGAP2Q13576 1575 aa9.32□□□□□ -0.92
SF3B2-205ENST00000526653 BARGINQ6ZT62 677 aa9.31□□□□□ -0.92
SF3B2-205ENST00000526653 ZBTB24O43167 697 aaPredicted RBP9.3□□□□□ -0.92
SF3B2-205ENST00000526653 ZMYND10O75800 440 aa9.3□□□□□ -0.92
SF3B2-205ENST00000526653 DXOO77932 396 aaKnown RBP9.3□□□□□ -0.92
SF3B2-205ENST00000526653 MADDQ8WXG6 1647 aa9.3□□□□□ -0.92
SF3B2-205ENST00000526653 SPATA31D1Q6ZQQ2 1576 aa9.29□□□□□ -0.92
SF3B2-205ENST00000526653 NUTM1Q86Y26 1132 aa9.29□□□□□ -0.92
SF3B2-205ENST00000526653 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
SF3B2-205ENST00000526653 YEATS2Q9ULM3 1422 aa9.29□□□□□ -0.92
SF3B2-205ENST00000526653 UBAP1LF5GYI3 381 aa9.28□□□□□ -0.92
SF3B2-205ENST00000526653 SYMPKQ92797 1274 aaKnown RBP9.28□□□□□ -0.92
SF3B2-205ENST00000526653 SSTR3P32745 418 aaPredicted RBP9.27□□□□□ -0.93
SF3B2-205ENST00000526653 TOR4AQ9NXH8 423 aa9.27□□□□□ -0.93
SF3B2-205ENST00000526653 CFAP43Q8NDM7 1665 aa9.26□□□□□ -0.93
SF3B2-205ENST00000526653 UGGT2Q9NYU1 1516 aa9.26□□□□□ -0.93
SF3B2-205ENST00000526653 BCORL1Q5H9F3 1711 aa9.26□□□□□ -0.93
SF3B2-205ENST00000526653 POGZQ7Z3K3 1410 aa9.26□□□□□ -0.93
SF3B2-205ENST00000526653 ST8SIA5O15466 376 aa9.26□□□□□ -0.93
SF3B2-205ENST00000526653 TRIM32Q13049 653 aa9.26□□□□□ -0.93
SF3B2-205ENST00000526653 CYP4X1Q8N118 509 aa9.26□□□□□ -0.93
SF3B2-205ENST00000526653 TTLL12Q14166 644 aaPredicted RBP9.25□□□□□ -0.93
SF3B2-205ENST00000526653 AMHR2Q16671 573 aa9.25□□□□□ -0.93
SF3B2-205ENST00000526653 CCDC24Q8N4L8 307 aa9.25□□□□□ -0.93
SF3B2-205ENST00000526653 AAASQ9NRG9 546 aa9.25□□□□□ -0.93
SF3B2-205ENST00000526653 ATP10BO94823 1461 aa9.25□□□□□ -0.93
SF3B2-205ENST00000526653 RIMS1Q86UR5 1692 aaKnown RBP9.24□□□□□ -0.93
SF3B2-205ENST00000526653 RAPGEF2Q9Y4G8 1499 aa9.24□□□□□ -0.93
SF3B2-205ENST00000526653 POTECB2RU33 542 aa9.24□□□□□ -0.93
SF3B2-205ENST00000526653 PCDHGC3Q9UN70 934 aa9.24□□□□□ -0.93
SF3B2-205ENST00000526653 WNT7AO00755 349 aa9.23□□□□□ -0.93
SF3B2-205ENST00000526653 FDX1P10109 184 aa9.23□□□□□ -0.93
SF3B2-205ENST00000526653 JUNDP17535 347 aa9.23□□□□□ -0.93
SF3B2-205ENST00000526653 SPIRE2Q8WWL2 714 aa9.23□□□□□ -0.93
SF3B2-205ENST00000526653 KIAA0556O60303 1618 aa9.23□□□□□ -0.93
SF3B2-205ENST00000526653 NEO1Q92859 1461 aa9.22□□□□□ -0.93
SF3B2-205ENST00000526653 PLEKHD1A6NEE1 506 aa9.22□□□□□ -0.93
SF3B2-205ENST00000526653 GIGYF2Q6Y7W6 1299 aaKnown RBP9.22□□□□□ -0.93
SF3B2-205ENST00000526653 RETREG3Q86VR2 466 aa9.22□□□□□ -0.93
SF3B2-205ENST00000526653 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
SF3B2-205ENST00000526653 DENND4BO75064 1496 aaPredicted RBP9.21□□□□□ -0.93
SF3B2-205ENST00000526653 TTC24A2A3L6 582 aaPredicted RBP9.21□□□□□ -0.94
SF3B2-205ENST00000526653 HSPA1LP34931 641 aa9.21□□□□□ -0.94
SF3B2-205ENST00000526653 PIP4K2BP78356 416 aa9.21□□□□□ -0.94
SF3B2-205ENST00000526653 ABCA8O94911 1581 aa9.2□□□□□ -0.94
SF3B2-205ENST00000526653 C6orf229H3BNL8 230 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms