RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 MTHFSP49914 203 aa26.66■■□□□ 1.86
PPP1CA-204ENST00000526510 BLMP54132 1417 aaPredicted RBP26.64■■□□□ 1.86
PPP1CA-204ENST00000526510 NCOA3Q9Y6Q9 1424 aa26.64■■□□□ 1.86
PPP1CA-204ENST00000526510 NGDNQ8NEJ9 315 aaKnown RBP26.64■■□□□ 1.86
PPP1CA-204ENST00000526510 INSRP06213 1382 aa26.64■■□□□ 1.85
PPP1CA-204ENST00000526510 PIK3C2AO00443 1686 aa26.64■■□□□ 1.85
PPP1CA-204ENST00000526510 C19orf44Q9H6X5 657 aa26.63■■□□□ 1.85
PPP1CA-204ENST00000526510 ADAMTS8Q9UP79 889 aa26.63■■□□□ 1.85
PPP1CA-204ENST00000526510 PHF8Q9UPP1 1060 aa26.62■■□□□ 1.85
PPP1CA-204ENST00000526510 MARF1Q9Y4F3 1742 aaKnown RBP26.62■■□□□ 1.85
PPP1CA-204ENST00000526510 ZBED9Q6R2W3 1325 aa26.6■■□□□ 1.85
PPP1CA-204ENST00000526510 ZNF335Q9H4Z2 1342 aaPredicted RBP26.6■■□□□ 1.85
PPP1CA-204ENST00000526510 SCAF1Q9H7N4 1312 aaKnown RBP26.6■■□□□ 1.85
PPP1CA-204ENST00000526510 OVOS2A0A0J9YW53 1432 aa26.6■■□□□ 1.85
PPP1CA-204ENST00000526510 OVOS2Q6IE36 1432 aa26.6■■□□□ 1.85
PPP1CA-204ENST00000526510 COL3A1P02461 1466 aaPredicted RBP26.59■■□□□ 1.85
PPP1CA-204ENST00000526510 USP54Q70EL1 1684 aa26.58■■□□□ 1.85
PPP1CA-204ENST00000526510 LRRC7Q96NW7 1537 aa26.58■■□□□ 1.85
PPP1CA-204ENST00000526510 DCCP43146 1447 aa26.58■■□□□ 1.85
PPP1CA-204ENST00000526510 FBLN1P23142 703 aa26.58■■□□□ 1.85
PPP1CA-204ENST00000526510 WDR43Q15061 677 aaKnown RBP eCLIP26.58■■□□□ 1.85
PPP1CA-204ENST00000526510 TTC21AQ8NDW8 1320 aa26.57■■□□□ 1.84
PPP1CA-204ENST00000526510 SENP3-EIF4A1A0A087X0R7 540 aa26.57■■□□□ 1.84
PPP1CA-204ENST00000526510 ESCO1Q5FWF5 840 aa26.57■■□□□ 1.84
PPP1CA-204ENST00000526510 COG3Q96JB2 828 aa26.57■■□□□ 1.84
PPP1CA-204ENST00000526510 C1orf167Q5SNV9 1468 aa26.57■■□□□ 1.84
PPP1CA-204ENST00000526510 KIF1AQ12756 1690 aa26.57■■□□□ 1.84
PPP1CA-204ENST00000526510 MST1RQ04912 1400 aa26.55■■□□□ 1.84
PPP1CA-204ENST00000526510 ORAI2Q96SN7 254 aa26.55■■□□□ 1.84
PPP1CA-204ENST00000526510 AATKQ6ZMQ8 1374 aa26.54■■□□□ 1.84
PPP1CA-204ENST00000526510 CFAP53Q96M91 514 aa26.54■■□□□ 1.84
PPP1CA-204ENST00000526510 POLKQ9UBT6 870 aa26.54■■□□□ 1.84
PPP1CA-204ENST00000526510 SMG6Q86US8 1419 aaKnown RBP26.53■■□□□ 1.84
PPP1CA-204ENST00000526510 PNPLA6Q8IY17 1366 aa26.53■■□□□ 1.84
PPP1CA-204ENST00000526510 USP31Q70CQ4 1352 aa26.52■■□□□ 1.84
PPP1CA-204ENST00000526510 TRPM3Q9HCF6 1732 aaPredicted RBP26.51■■□□□ 1.83
PPP1CA-204ENST00000526510 ATF3P18847 181 aa26.5■■□□□ 1.83
PPP1CA-204ENST00000526510 DMRT2Q9Y5R5 561 aa26.5■■□□□ 1.83
PPP1CA-204ENST00000526510 MSH6P52701 1360 aa26.49■■□□□ 1.83
PPP1CA-204ENST00000526510 EMILIN1Q9Y6C2 1016 aa26.48■■□□□ 1.83
PPP1CA-204ENST00000526510 PEAK1Q9H792 1746 aa26.48■■□□□ 1.83
PPP1CA-204ENST00000526510 CDK12Q9NYV4 1490 aaPredicted RBP26.47■■□□□ 1.83
PPP1CA-204ENST00000526510 RRS1Q15050 365 aaKnown RBP26.45■■□□□ 1.82
PPP1CA-204ENST00000526510 CADPS2Q86UW7 1296 aa26.45■■□□□ 1.82
PPP1CA-204ENST00000526510 FOXO3O43524 673 aa26.44■■□□□ 1.82
PPP1CA-204ENST00000526510 PSME1Q06323 249 aa26.44■■□□□ 1.82
PPP1CA-204ENST00000526510 CCDC146Q8IYE0 955 aa26.44■■□□□ 1.82
PPP1CA-204ENST00000526510 PPM1GO15355 546 aaPredicted RBP26.43■■□□□ 1.82
PPP1CA-204ENST00000526510 PAK3O75914 559 aaPredicted RBP26.43■■□□□ 1.82
PPP1CA-204ENST00000526510 NLRP6P59044 892 aa26.41■■□□□ 1.82
PPP1CA-204ENST00000526510 NUTM2GQ5VZR2 741 aa26.41■■□□□ 1.82
PPP1CA-204ENST00000526510 ABTB2Q8N961 1025 aa26.41■■□□□ 1.82
PPP1CA-204ENST00000526510 SALL2Q9Y467 1007 aaPredicted RBP26.41■■□□□ 1.82
PPP1CA-204ENST00000526510 DIAPH1O60610 1272 aaKnown RBP26.4■■□□□ 1.82
PPP1CA-204ENST00000526510 XPCQ01831 940 aaPredicted RBP26.4■■□□□ 1.82
PPP1CA-204ENST00000526510 ALS2Q96Q42 1657 aa26.4■■□□□ 1.82
PPP1CA-204ENST00000526510 LTN1O94822 1766 aa26.38■■□□□ 1.81
PPP1CA-204ENST00000526510 U2AF1L5P0DN76 240 aaPredicted RBP26.37■■□□□ 1.81
PPP1CA-204ENST00000526510 U2AF1Q01081 240 aaKnown RBP eCLIP26.37■■□□□ 1.81
PPP1CA-204ENST00000526510 NUDCQ9Y266 331 aa26.37■■□□□ 1.81
PPP1CA-204ENST00000526510 IQSEC2Q5JU85 1478 aa26.37■■□□□ 1.81
PPP1CA-204ENST00000526510 SOX12O15370 315 aa26.36■■□□□ 1.81
PPP1CA-204ENST00000526510 KRT28Q7Z3Y7 464 aa26.36■■□□□ 1.81
PPP1CA-204ENST00000526510 APAF1O14727 1248 aa26.35■■□□□ 1.81
PPP1CA-204ENST00000526510 U2SURPO15042 1029 aaKnown RBP26.34■■□□□ 1.81
PPP1CA-204ENST00000526510 NFAT5O94916 1531 aa26.34■■□□□ 1.81
PPP1CA-204ENST00000526510 IL13P35225 146 aa26.34■■□□□ 1.81
PPP1CA-204ENST00000526510 RUNDC1Q96C34 613 aa26.34■■□□□ 1.81
PPP1CA-204ENST00000526510 LTBP4Q8N2S1 1624 aa26.33■■□□□ 1.81
PPP1CA-204ENST00000526510 MAP3K19Q56UN5 1328 aa26.33■■□□□ 1.81
PPP1CA-204ENST00000526510 DDX17Q92841 729 aaKnown RBP26.33■■□□□ 1.81
PPP1CA-204ENST00000526510 GTF3C3Q9Y5Q9 886 aa26.31■■□□□ 1.8
PPP1CA-204ENST00000526510 RGPD1P0DJD0 1748 aa26.31■■□□□ 1.8
PPP1CA-204ENST00000526510 PXDNQ92626 1479 aa26.31■■□□□ 1.8
PPP1CA-204ENST00000526510 ZNF521Q96K83 1311 aa26.3■■□□□ 1.8
PPP1CA-204ENST00000526510 SLIT3O75094 1523 aa26.3■■□□□ 1.8
PPP1CA-204ENST00000526510 BRINP3Q76B58 766 aa26.3■■□□□ 1.8
PPP1CA-204ENST00000526510 SBNO1A3KN83 1393 aa26.29■■□□□ 1.8
PPP1CA-204ENST00000526510 PLEKHF1Q96S99 279 aa26.29■■□□□ 1.8
PPP1CA-204ENST00000526510 SLAIN2Q9P270 581 aa26.29■■□□□ 1.8
PPP1CA-204ENST00000526510 HSP90AB2PQ58FF8 381 aa26.28■■□□□ 1.8
PPP1CA-204ENST00000526510 PHRF1Q9P1Y6 1649 aaKnown RBP26.27■■□□□ 1.8
PPP1CA-204ENST00000526510 PDE3BQ13370 1112 aa26.27■■□□□ 1.8
PPP1CA-204ENST00000526510 TCP11L2Q8N4U5 519 aa26.27■■□□□ 1.8
PPP1CA-204ENST00000526510 NPHP3Q7Z494 1330 aa26.27■■□□□ 1.8
PPP1CA-204ENST00000526510 FLT4P35916 1363 aa26.26■■□□□ 1.79
PPP1CA-204ENST00000526510 EIF4A2Q14240 407 aaKnown RBP26.26■■□□□ 1.79
PPP1CA-204ENST00000526510 CDCA7LQ96GN5 454 aa26.26■■□□□ 1.79
PPP1CA-204ENST00000526510 CRYBG1Q9Y4K1 1723 aa26.25■■□□□ 1.79
PPP1CA-204ENST00000526510 MED1Q15648 1581 aaPredicted RBP26.25■■□□□ 1.79
PPP1CA-204ENST00000526510 USP19O94966 1318 aa26.24■■□□□ 1.79
PPP1CA-204ENST00000526510 RSPH6AQ9H0K4 717 aa26.24■■□□□ 1.79
PPP1CA-204ENST00000526510 NHSL1Q5SYE7 1610 aa26.24■■□□□ 1.79
PPP1CA-204ENST00000526510 KIF24Q5T7B8 1368 aa26.24■■□□□ 1.79
PPP1CA-204ENST00000526510 FCHSD2O94868 740 aa26.22■■□□□ 1.79
PPP1CA-204ENST00000526510 LMOD2Q6P5Q4 547 aa26.22■■□□□ 1.79
PPP1CA-204ENST00000526510 NGEFQ8N5V2 710 aa26.22■■□□□ 1.79
PPP1CA-204ENST00000526510 RRP7AQ9Y3A4 280 aaKnown RBP26.22■■□□□ 1.79
PPP1CA-204ENST00000526510 AMPHP49418 695 aa26.22■■□□□ 1.79
PPP1CA-204ENST00000526510 TNS3Q68CZ2 1445 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms