RNA–Protein interactions for RNA: ENST00000526442.5

PRDM11-202, Transcript of PR/SET domain 11, humanhuman

TSL 3

Gene PRDM11, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-202ENST00000526442 PLCH1Q4KWH8 1693 aa28.77■■■□□ 2.2
PRDM11-202ENST00000526442 PLEKHG3A1L390 1219 aa28.77■■■□□ 2.2
PRDM11-202ENST00000526442 SLIT2O94813 1529 aa28.76■■■□□ 2.19
PRDM11-202ENST00000526442 RALGAPBQ86X10 1494 aa28.76■■■□□ 2.19
PRDM11-202ENST00000526442 RGS12O14924 1447 aa28.76■■■□□ 2.19
PRDM11-202ENST00000526442 PPIP5K1Q6PFW1 1433 aa28.76■■■□□ 2.19
PRDM11-202ENST00000526442 NWD2Q9ULI1 1742 aa28.74■■■□□ 2.19
PRDM11-202ENST00000526442 CARD11Q9BXL7 1154 aa28.72■■■□□ 2.19
PRDM11-202ENST00000526442 EVC2Q86UK5 1308 aa28.71■■■□□ 2.19
PRDM11-202ENST00000526442 UNC5CLQ8IV45 518 aa28.7■■■□□ 2.18
PRDM11-202ENST00000526442 PHRF1Q9P1Y6 1649 aaKnown RBP28.69■■■□□ 2.18
PRDM11-202ENST00000526442 PCGF6Q9BYE7 350 aa28.68■■■□□ 2.18
PRDM11-202ENST00000526442 CABP1Q9NZU7 370 aa28.67■■■□□ 2.18
PRDM11-202ENST00000526442 COL14A1Q05707 1796 aaKnown RBP28.66■■■□□ 2.18
PRDM11-202ENST00000526442 FAM83GA6ND36 823 aa28.66■■■□□ 2.18
PRDM11-202ENST00000526442 GJD4Q96KN9 370 aaPredicted RBP28.66■■■□□ 2.18
PRDM11-202ENST00000526442 NRAPQ86VF7 1730 aa28.64■■■□□ 2.18
PRDM11-202ENST00000526442 GLI3P10071 1580 aa28.64■■■□□ 2.18
PRDM11-202ENST00000526442 SBNO2Q9Y2G9 1366 aa28.63■■■□□ 2.17
PRDM11-202ENST00000526442 NUTM2GQ5VZR2 741 aa28.63■■■□□ 2.17
PRDM11-202ENST00000526442 AKAP12Q02952 1782 aa28.61■■■□□ 2.17
PRDM11-202ENST00000526442 ABTB2Q8N961 1025 aa28.6■■■□□ 2.17
PRDM11-202ENST00000526442 UPF1Q92900 1129 aaKnown RBP eCLIP28.6■■■□□ 2.17
PRDM11-202ENST00000526442 USP6P35125 1406 aa28.6■■■□□ 2.17
PRDM11-202ENST00000526442 VPS72Q15906 364 aa28.58■■■□□ 2.17
PRDM11-202ENST00000526442 BRD4O60885 1362 aaPredicted RBP28.58■■■□□ 2.17
PRDM11-202ENST00000526442 BTG4Q9NY30 223 aa28.57■■■□□ 2.16
PRDM11-202ENST00000526442 NRKQ7Z2Y5 1582 aa28.57■■■□□ 2.16
PRDM11-202ENST00000526442 ATAD2Q6PL18 1390 aa28.56■■■□□ 2.16
PRDM11-202ENST00000526442 PRDM11Q9NQV5 511 aa28.55■■■□□ 2.16
PRDM11-202ENST00000526442 KIAA0232Q92628 1395 aa28.54■■■□□ 2.16
PRDM11-202ENST00000526442 CLSPNQ9HAW4 1339 aa28.54■■■□□ 2.16
PRDM11-202ENST00000526442 CCDC9Q9Y3X0 531 aaKnown RBP28.54■■■□□ 2.16
PRDM11-202ENST00000526442 BRWD3Q6RI45 1802 aa28.54■■■□□ 2.16
PRDM11-202ENST00000526442 PIK3C2AO00443 1686 aa28.53■■■□□ 2.16
PRDM11-202ENST00000526442 SSH2Q76I76 1423 aa28.52■■■□□ 2.16
PRDM11-202ENST00000526442 USP19O94966 1318 aa28.52■■■□□ 2.16
PRDM11-202ENST00000526442 ZC3H6P61129 1189 aaKnown RBP28.52■■■□□ 2.16
PRDM11-202ENST00000526442 NLRP13Q86W25 1043 aa28.52■■■□□ 2.16
PRDM11-202ENST00000526442 MON2Q7Z3U7 1717 aa28.51■■■□□ 2.15
PRDM11-202ENST00000526442 CHRNA2Q15822 529 aa28.5■■■□□ 2.15
PRDM11-202ENST00000526442 ZNF692Q9BU19 519 aaPredicted RBP28.5■■■□□ 2.15
PRDM11-202ENST00000526442 CPSF1Q10570 1443 aaKnown RBP28.49■■■□□ 2.15
PRDM11-202ENST00000526442 ST20-MTHFSA0A0A6YYL1 179 aa28.48■■■□□ 2.15
PRDM11-202ENST00000526442 TIMELESSQ9UNS1 1208 aa28.48■■■□□ 2.15
PRDM11-202ENST00000526442 NLRP6P59044 892 aa28.46■■■□□ 2.15
PRDM11-202ENST00000526442 TESK2Q96S53 571 aa28.46■■■□□ 2.15
PRDM11-202ENST00000526442 GCP02774 474 aa28.45■■■□□ 2.14
PRDM11-202ENST00000526442 KTN1Q86UP2 1357 aaKnown RBP28.45■■■□□ 2.14
PRDM11-202ENST00000526442 LMO7Q8WWI1 1683 aa28.45■■■□□ 2.14
PRDM11-202ENST00000526442 TTC21BQ7Z4L5 1316 aa28.44■■■□□ 2.14
PRDM11-202ENST00000526442 SLIT3O75094 1523 aa28.44■■■□□ 2.14
PRDM11-202ENST00000526442 ONECUT3O60422 494 aaPredicted RBP28.44■■■□□ 2.14
PRDM11-202ENST00000526442 SEPT12Q8IYM1 358 aa28.44■■■□□ 2.14
PRDM11-202ENST00000526442 CPDO75976 1380 aa28.44■■■□□ 2.14
PRDM11-202ENST00000526442 CD163L1Q9NR16 1453 aa28.43■■■□□ 2.14
PRDM11-202ENST00000526442 EP400Q96L91 3159 aa28.42■■■□□ 2.14
PRDM11-202ENST00000526442 TMC1Q8TDI8 760 aa28.42■■■□□ 2.14
PRDM11-202ENST00000526442 SPATA31A5Q5VU36 1347 aa28.42■■■□□ 2.14
PRDM11-202ENST00000526442 SPATA31A7Q8IWB4 1347 aa28.42■■■□□ 2.14
PRDM11-202ENST00000526442 CAMTA1Q9Y6Y1 1673 aa28.42■■■□□ 2.14
PRDM11-202ENST00000526442 USP47Q96K76 1375 aa28.41■■■□□ 2.14
PRDM11-202ENST00000526442 PUS7Q96PZ0 661 aaKnown RBP28.41■■■□□ 2.14
PRDM11-202ENST00000526442 TTC21AQ8NDW8 1320 aa28.41■■■□□ 2.14
PRDM11-202ENST00000526442 CCER1Q8TC90 406 aaPredicted RBP28.4■■■□□ 2.14
PRDM11-202ENST00000526442 SLC12A5Q9H2X9 1139 aa28.4■■■□□ 2.14
PRDM11-202ENST00000526442 STRN4Q9NRL3 753 aa28.4■■■□□ 2.14
PRDM11-202ENST00000526442 FAM98CQ17RN3 349 aaKnown RBP28.39■■■□□ 2.14
PRDM11-202ENST00000526442 A0A0G2JS52 829 aa28.36■■■□□ 2.13
PRDM11-202ENST00000526442 SLC24A1O60721 1099 aa28.36■■■□□ 2.13
PRDM11-202ENST00000526442 MYT1Q01538 1121 aa28.36■■■□□ 2.13
PRDM11-202ENST00000526442 THSD7AQ9UPZ6 1657 aa28.35■■■□□ 2.13
PRDM11-202ENST00000526442 EVA1CP58658 441 aa28.35■■■□□ 2.13
PRDM11-202ENST00000526442 HDGFL2Q7Z4V5 671 aaPredicted RBP28.35■■■□□ 2.13
PRDM11-202ENST00000526442 SPATA31A1Q5TZJ5 1347 aa28.35■■■□□ 2.13
PRDM11-202ENST00000526442 COL18A1P39060 1754 aa28.34■■■□□ 2.13
PRDM11-202ENST00000526442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.34■■■□□ 2.13
PRDM11-202ENST00000526442 USP54Q70EL1 1684 aa28.34■■■□□ 2.13
PRDM11-202ENST00000526442 ZBTB7CA1YPR0 619 aa28.33■■■□□ 2.13
PRDM11-202ENST00000526442 KRT27Q7Z3Y8 459 aa28.32■■■□□ 2.12
PRDM11-202ENST00000526442 TERF2IPQ9NYB0 399 aa28.32■■■□□ 2.12
PRDM11-202ENST00000526442 A0A1W2PP64 1363 aa28.32■■■□□ 2.12
PRDM11-202ENST00000526442 RGPD5Q99666 1765 aa28.32■■■□□ 2.12
PRDM11-202ENST00000526442 COL5A2P05997 1499 aaPredicted RBP28.31■■■□□ 2.12
PRDM11-202ENST00000526442 EDC4Q6P2E9 1401 aaKnown RBP28.3■■■□□ 2.12
PRDM11-202ENST00000526442 AATKQ6ZMQ8 1374 aa28.3■■■□□ 2.12
PRDM11-202ENST00000526442 NINLQ9Y2I6 1382 aa28.3■■■□□ 2.12
PRDM11-202ENST00000526442 LARP1Q6PKG0 1096 aaKnown RBP28.3■■■□□ 2.12
PRDM11-202ENST00000526442 KCNH5Q8NCM2 988 aa28.3■■■□□ 2.12
PRDM11-202ENST00000526442 ZRANB1Q9UGI0 708 aa28.3■■■□□ 2.12
PRDM11-202ENST00000526442 TMF1P82094 1093 aa28.29■■■□□ 2.12
PRDM11-202ENST00000526442 USP35Q9P2H5 1018 aa28.29■■■□□ 2.12
PRDM11-202ENST00000526442 NFAT5O94916 1531 aa28.28■■■□□ 2.12
PRDM11-202ENST00000526442 USP31Q70CQ4 1352 aa28.28■■■□□ 2.12
PRDM11-202ENST00000526442 SOX12O15370 315 aa28.28■■■□□ 2.12
PRDM11-202ENST00000526442 NME9Q86XW9 330 aa28.28■■■□□ 2.12
PRDM11-202ENST00000526442 CCDC125Q86Z20 511 aa28.27■■■□□ 2.12
PRDM11-202ENST00000526442 ARHGEF25Q86VW2 580 aa28.26■■■□□ 2.11
PRDM11-202ENST00000526442 LTN1O94822 1766 aa28.24■■■□□ 2.11
PRDM11-202ENST00000526442 BARGINQ6ZT62 677 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms