RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 BAP1Q92560 729 aa5.83□□□□□ -1.48
TRAPPC4-207ENST00000526141 CCDC102AQ96A19 550 aa5.83□□□□□ -1.48
TRAPPC4-207ENST00000526141 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
TRAPPC4-207ENST00000526141 WDR4P57081 412 aaKnown RBP5.82□□□□□ -1.48
TRAPPC4-207ENST00000526141 LINC01559Q495D7 138 aa5.82□□□□□ -1.48
TRAPPC4-207ENST00000526141 DESI1Q6ICB0 168 aa5.82□□□□□ -1.48
TRAPPC4-207ENST00000526141 PURBQ96QR8 312 aaKnown RBP5.82□□□□□ -1.48
TRAPPC4-207ENST00000526141 KRTAP4-6Q9BYQ5 205 aa5.82□□□□□ -1.48
TRAPPC4-207ENST00000526141 PCDHGC3Q9UN70 934 aa5.82□□□□□ -1.48
TRAPPC4-207ENST00000526141 KDM2AQ9Y2K7 1162 aa5.82□□□□□ -1.48
TRAPPC4-207ENST00000526141 TLL2Q9Y6L7 1015 aa5.82□□□□□ -1.48
TRAPPC4-207ENST00000526141 TIMP2P16035 220 aa5.81□□□□□ -1.48
TRAPPC4-207ENST00000526141 FAM174AQ8TBP5 190 aa5.81□□□□□ -1.48
TRAPPC4-207ENST00000526141 MAN1A2O60476 641 aa5.8□□□□□ -1.48
TRAPPC4-207ENST00000526141 PRR7Q8TB68 274 aa5.8□□□□□ -1.48
TRAPPC4-207ENST00000526141 UPP2O95045 317 aa5.79□□□□□ -1.48
TRAPPC4-207ENST00000526141 SSTR3P32745 418 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC4-207ENST00000526141 KCNMA1Q12791 1236 aa5.79□□□□□ -1.48
TRAPPC4-207ENST00000526141 MTMR2Q13614 643 aa5.79□□□□□ -1.48
TRAPPC4-207ENST00000526141 SPIRE2Q8WWL2 714 aa5.79□□□□□ -1.48
TRAPPC4-207ENST00000526141 NR5A1Q13285 461 aa5.78□□□□□ -1.48
TRAPPC4-207ENST00000526141 CDK15Q96Q40 435 aa5.78□□□□□ -1.48
TRAPPC4-207ENST00000526141 KLF16Q9BXK1 252 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC4-207ENST00000526141 ZIC2O95409 532 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC4-207ENST00000526141 CTHP32929 405 aa5.77□□□□□ -1.49
TRAPPC4-207ENST00000526141 SUZ12Q15022 739 aaKnown RBP5.77□□□□□ -1.49
TRAPPC4-207ENST00000526141 MOXD2PA6NHM9 499 aa5.76□□□□□ -1.49
TRAPPC4-207ENST00000526141 SOBPA7XYQ1 873 aa5.76□□□□□ -1.49
TRAPPC4-207ENST00000526141 RNF225M0QZC1 329 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC4-207ENST00000526141 SPTLC1O15269 473 aa5.76□□□□□ -1.49
TRAPPC4-207ENST00000526141 NDUFV2P19404 249 aa5.76□□□□□ -1.49
TRAPPC4-207ENST00000526141 GJA5P36382 358 aa5.76□□□□□ -1.49
TRAPPC4-207ENST00000526141 ARID5BQ14865 1188 aa5.76□□□□□ -1.49
TRAPPC4-207ENST00000526141 DIXDC1Q155Q3 683 aa5.76□□□□□ -1.49
TRAPPC4-207ENST00000526141 PPFIA3O75145 1194 aa5.75□□□□□ -1.49
TRAPPC4-207ENST00000526141 C6orf118Q5T5N4 469 aa5.75□□□□□ -1.49
TRAPPC4-207ENST00000526141 LYPD8Q6UX82 237 aa5.75□□□□□ -1.49
TRAPPC4-207ENST00000526141 GTF3C3Q9Y5Q9 886 aa5.75□□□□□ -1.49
TRAPPC4-207ENST00000526141 BMP2P12643 396 aa5.74□□□□□ -1.49
TRAPPC4-207ENST00000526141 TTLL12Q14166 644 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC4-207ENST00000526141 AGERQ15109 404 aa5.74□□□□□ -1.49
TRAPPC4-207ENST00000526141 BPHLQ86WA6 291 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC4-207ENST00000526141 TMEM151AQ8N4L1 468 aa5.74□□□□□ -1.49
TRAPPC4-207ENST00000526141 ITPKCQ96DU7 683 aa5.74□□□□□ -1.49
TRAPPC4-207ENST00000526141 HOMEZQ8IX15 550 aa5.73□□□□□ -1.49
TRAPPC4-207ENST00000526141 LINC00528Q8N1L1 170 aa5.73□□□□□ -1.49
TRAPPC4-207ENST00000526141 KCTD17Q8N5Z5 321 aa5.73□□□□□ -1.49
TRAPPC4-207ENST00000526141 ZFAND3Q9H8U3 227 aa5.73□□□□□ -1.49
TRAPPC4-207ENST00000526141 GDF11O95390 407 aa5.72□□□□□ -1.49
TRAPPC4-207ENST00000526141 MEIOBQ8N635 442 aa5.72□□□□□ -1.49
TRAPPC4-207ENST00000526141 FOXJ1Q92949 421 aa5.72□□□□□ -1.49
TRAPPC4-207ENST00000526141 GRM5P41594 1212 aa5.71□□□□□ -1.5
TRAPPC4-207ENST00000526141 RASSF7Q02833 373 aa5.71□□□□□ -1.5
TRAPPC4-207ENST00000526141 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.71□□□□□ -1.5
TRAPPC4-207ENST00000526141 ARMC2Q8NEN0 867 aa5.71□□□□□ -1.5
TRAPPC4-207ENST00000526141 TSEN34Q9BSV6 310 aaKnown RBP5.71□□□□□ -1.5
TRAPPC4-207ENST00000526141 ZBTB3Q9H5J0 574 aa5.71□□□□□ -1.5
TRAPPC4-207ENST00000526141 SOS2Q07890 1332 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC4-207ENST00000526141 F12P00748 615 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC4-207ENST00000526141 NR3C2P08235 984 aa5.7□□□□□ -1.5
TRAPPC4-207ENST00000526141 GSK3AP49840 483 aa5.7□□□□□ -1.5
TRAPPC4-207ENST00000526141 BEGAINQ9BUH8 593 aa5.7□□□□□ -1.5
TRAPPC4-207ENST00000526141 ADAMTS8Q9UP79 889 aa5.7□□□□□ -1.5
TRAPPC4-207ENST00000526141 EMILIN1Q9Y6C2 1016 aa5.7□□□□□ -1.5
TRAPPC4-207ENST00000526141 AMHR2Q16671 573 aa5.69□□□□□ -1.5
TRAPPC4-207ENST00000526141 PRPF38BQ5VTL8 546 aaKnown RBP5.69□□□□□ -1.5
TRAPPC4-207ENST00000526141 RSBN1LQ6PCB5 846 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC4-207ENST00000526141 TBC1D2Q9BYX2 928 aa5.69□□□□□ -1.5
TRAPPC4-207ENST00000526141 MAP10Q9P2G4 905 aa5.69□□□□□ -1.5
TRAPPC4-207ENST00000526141 DNMT3LQ9UJW3 386 aa5.69□□□□□ -1.5
TRAPPC4-207ENST00000526141 MAP4K5Q9Y4K4 846 aa5.69□□□□□ -1.5
TRAPPC4-207ENST00000526141 TTLL8A6PVC2 850 aa5.68□□□□□ -1.5
TRAPPC4-207ENST00000526141 CFAP99D6REC4 459 aa5.68□□□□□ -1.5
TRAPPC4-207ENST00000526141 HRCP23327 699 aa5.68□□□□□ -1.5
TRAPPC4-207ENST00000526141 GIGYF2Q6Y7W6 1299 aaKnown RBP5.68□□□□□ -1.5
TRAPPC4-207ENST00000526141 CNTNAP3BQ96NU0 1288 aa5.68□□□□□ -1.5
TRAPPC4-207ENST00000526141 CNTNAP3Q9BZ76 1288 aa5.68□□□□□ -1.5
TRAPPC4-207ENST00000526141 C4orf48Q5BLP8 95 aa5.67□□□□□ -1.5
TRAPPC4-207ENST00000526141 NBPF14Q5TI25 921 aa5.67□□□□□ -1.5
TRAPPC4-207ENST00000526141 VASH1Q7L8A9 365 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC4-207ENST00000526141 NANOS1Q8WY41 292 aaKnown RBP5.67□□□□□ -1.5
TRAPPC4-207ENST00000526141 IGHA1P01876 353 aa5.66□□□□□ -1.5
TRAPPC4-207ENST00000526141 FSHRP23945 695 aa5.66□□□□□ -1.5
TRAPPC4-207ENST00000526141 PTSQ03393 145 aa5.66□□□□□ -1.5
TRAPPC4-207ENST00000526141 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.66□□□□□ -1.5
TRAPPC4-207ENST00000526141 CCDC116Q8IYX3 515 aa5.66□□□□□ -1.5
TRAPPC4-207ENST00000526141 SVOPQ8N4V2 548 aa5.66□□□□□ -1.5
TRAPPC4-207ENST00000526141 GPR161Q8N6U8 529 aaKnown RBP5.66□□□□□ -1.5
TRAPPC4-207ENST00000526141 C1QTNF2Q9BXJ5 285 aa5.66□□□□□ -1.5
TRAPPC4-207ENST00000526141 PCDHB15Q9Y5E8 787 aa5.66□□□□□ -1.5
TRAPPC4-207ENST00000526141 FOXK2Q01167 660 aa5.65□□□□□ -1.5
TRAPPC4-207ENST00000526141 KRT76Q01546 638 aa5.65□□□□□ -1.5
TRAPPC4-207ENST00000526141 BARGINQ6ZT62 677 aa5.65□□□□□ -1.5
TRAPPC4-207ENST00000526141 RIC3Q7Z5B4 369 aa5.65□□□□□ -1.5
TRAPPC4-207ENST00000526141 SH3RF1Q7Z6J0 888 aa5.65□□□□□ -1.5
TRAPPC4-207ENST00000526141 TRMT44Q8IYL2 757 aaKnown RBP5.65□□□□□ -1.5
TRAPPC4-207ENST00000526141 COL25A1Q9BXS0 654 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC4-207ENST00000526141 PGPEP1Q9NXJ5 209 aa5.65□□□□□ -1.5
TRAPPC4-207ENST00000526141 TMEM132AQ24JP5 1023 aa5.64□□□□□ -1.51
TRAPPC4-207ENST00000526141 KANK3Q6NY19 840 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms