RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 NAP1L2Q9ULW6 460 aaPredicted RBP5.79□□□□□ -1.48
HIPK3-204ENST00000525975 KDM5DQ9BY66 1539 aa5.79□□□□□ -1.48
HIPK3-204ENST00000525975 HDAC1Q13547 482 aaPredicted RBP5.78□□□□□ -1.48
HIPK3-204ENST00000525975 PAXIP1Q6ZW49 1069 aaPredicted RBP5.78□□□□□ -1.48
HIPK3-204ENST00000525975 MPNDQ8N594 471 aa5.78□□□□□ -1.48
HIPK3-204ENST00000525975 RBM42Q9BTD8 480 aaKnown RBP5.78□□□□□ -1.48
HIPK3-204ENST00000525975 TROQ12816 1431 aaPredicted RBP5.78□□□□□ -1.48
HIPK3-204ENST00000525975 FAM135AQ9P2D6 1515 aa5.78□□□□□ -1.48
HIPK3-204ENST00000525975 SPDYE4A6NLX3 237 aa5.78□□□□□ -1.48
HIPK3-204ENST00000525975 CD2BP2O95400 341 aaKnown RBP5.78□□□□□ -1.48
HIPK3-204ENST00000525975 TAF3Q5VWG9 929 aa5.78□□□□□ -1.48
HIPK3-204ENST00000525975 PDCL2Q8N4E4 241 aa5.78□□□□□ -1.48
HIPK3-204ENST00000525975 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.78□□□□□ -1.48
HIPK3-204ENST00000525975 FOXD4L5Q5VV16 416 aaPredicted RBP5.78□□□□□ -1.48
HIPK3-204ENST00000525975 FOXD4L4Q8WXT5 416 aaPredicted RBP5.78□□□□□ -1.48
HIPK3-204ENST00000525975 CHMP4BQ9H444 224 aaKnown RBP5.78□□□□□ -1.48
HIPK3-204ENST00000525975 CGNQ9P2M7 1197 aaKnown RBP5.78□□□□□ -1.48
HIPK3-204ENST00000525975 GTF2E1P29083 439 aaPredicted RBP5.77□□□□□ -1.49
HIPK3-204ENST00000525975 ANKRD45Q5TZF3 282 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 LRSAM1Q6UWE0 723 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 WDR63Q8IWG1 891 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 SYAP1Q96A49 352 aaPredicted RBP5.77□□□□□ -1.49
HIPK3-204ENST00000525975 CFAP53Q96M91 514 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 CHD1O14646 1710 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 PRDM15P57071 1507 aaPredicted RBP5.77□□□□□ -1.49
HIPK3-204ENST00000525975 ITSN2Q9NZM3 1697 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 A2MP01023 1474 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 WDR7Q9Y4E6 1490 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 PDIA4P13667 645 aaKnown RBP5.77□□□□□ -1.49
HIPK3-204ENST00000525975 MORC1Q86VD1 984 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 CHD1LQ86WJ1 897 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 STAC3Q96MF2 364 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 LMBRD1Q9NUN5 540 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.77□□□□□ -1.497e-7■■■■□ 22
HIPK3-204ENST00000525975 GPATCH8Q9UKJ3 1502 aaKnown RBP5.77□□□□□ -1.49
HIPK3-204ENST00000525975 PLXNC1O60486 1568 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 NUP160Q12769 1436 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 FAM177BA6PVY3 158 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 IGSF3O75054 1194 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 MBD3O95983 291 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 HNRNPMP52272 730 aaKnown RBP eCLIP5.77□□□□□ -1.499e-6■■■■□ 22.2
HIPK3-204ENST00000525975 RABEP1Q15276 862 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 BMP2KLQ5H9B9 411 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 TSPY26PQ9H489 355 aa5.77□□□□□ -1.49
HIPK3-204ENST00000525975 C14orf37Q86TY3 774 aa5.76□□□□□ -1.49
HIPK3-204ENST00000525975 JARID2Q92833 1246 aaPredicted RBP5.76□□□□□ -1.49
HIPK3-204ENST00000525975 EIF2AK4Q9P2K8 1649 aaKnown RBP5.76□□□□□ -1.49
HIPK3-204ENST00000525975 PLEKHD1A6NEE1 506 aa5.76□□□□□ -1.49
HIPK3-204ENST00000525975 IPO8O15397 1037 aaKnown RBP5.76□□□□□ -1.49
HIPK3-204ENST00000525975 ST18O60284 1047 aa5.76□□□□□ -1.49
HIPK3-204ENST00000525975 TRIM27P14373 513 aa5.76□□□□□ -1.49
HIPK3-204ENST00000525975 ATF7IPQ6VMQ6 1270 aa5.76□□□□□ -1.49
HIPK3-204ENST00000525975 CLEC17AQ6ZS10 378 aa5.76□□□□□ -1.49
HIPK3-204ENST00000525975 TBC1D9Q6ZT07 1266 aa5.76□□□□□ -1.49
HIPK3-204ENST00000525975 DIAPH3Q9NSV4 1193 aa5.76□□□□□ -1.49
HIPK3-204ENST00000525975 NUP153P49790 1475 aaKnown RBP5.76□□□□□ -1.49
HIPK3-204ENST00000525975 CDC45O75419 566 aa5.76□□□□□ -1.49
HIPK3-204ENST00000525975 PHF14O94880 888 aa5.76□□□□□ -1.49
HIPK3-204ENST00000525975 NUCB1Q02818 461 aa5.76□□□□□ -1.49
HIPK3-204ENST00000525975 VGLL3A8MV65 326 aa5.75□□□□□ -1.49
HIPK3-204ENST00000525975 U2AF1L5P0DN76 240 aaPredicted RBP5.75□□□□□ -1.49
HIPK3-204ENST00000525975 U2AF1Q01081 240 aaKnown RBP eCLIP5.75□□□□□ -1.498e-15■■■■■ 28.3
HIPK3-204ENST00000525975 NOLC1Q14978 699 aaKnown RBP eCLIP5.75□□□□□ -1.49
HIPK3-204ENST00000525975 ATP2B3Q16720 1220 aa5.75□□□□□ -1.49
HIPK3-204ENST00000525975 TSR2Q969E8 191 aaKnown RBP5.75□□□□□ -1.49
HIPK3-204ENST00000525975 CWC22Q9HCG8 908 aaKnown RBP5.75□□□□□ -1.49
HIPK3-204ENST00000525975 NPC1L1Q9UHC9 1359 aa5.75□□□□□ -1.49
HIPK3-204ENST00000525975 RAPGEF6Q8TEU7 1601 aa5.75□□□□□ -1.49
HIPK3-204ENST00000525975 TMEM57Q8N5G2 664 aa5.75□□□□□ -1.49
HIPK3-204ENST00000525975 ZNF830Q96NB3 372 aaPredicted RBP5.75□□□□□ -1.49
HIPK3-204ENST00000525975 TMEM63CQ9P1W3 806 aa5.75□□□□□ -1.49
HIPK3-204ENST00000525975 EXOSC9Q06265 439 aaKnown RBP5.75□□□□□ -1.49
HIPK3-204ENST00000525975 KLHL34Q8N239 644 aa5.75□□□□□ -1.49
HIPK3-204ENST00000525975 GPT2Q8TD30 523 aa5.75□□□□□ -1.49
HIPK3-204ENST00000525975 PIBF1Q8WXW3 757 aa5.75□□□□□ -1.49
HIPK3-204ENST00000525975 CFAP44Q96MT7 982 aa5.75□□□□□ -1.49
HIPK3-204ENST00000525975 KIF2CQ99661 725 aa5.75□□□□□ -1.49
HIPK3-204ENST00000525975 AK9Q5TCS8 1911 aa5.74□□□□□ -1.49
HIPK3-204ENST00000525975 PKP1Q13835 747 aa5.74□□□□□ -1.49
HIPK3-204ENST00000525975 CASC1Q6TDU7 716 aa5.74□□□□□ -1.49
HIPK3-204ENST00000525975 ZNF710Q8N1W2 664 aa5.74□□□□□ -1.49
HIPK3-204ENST00000525975 BCL2L12Q9HB09 334 aa5.74□□□□□ -1.49
HIPK3-204ENST00000525975 NOB1Q9ULX3 412 aaKnown RBP5.74□□□□□ -1.49
HIPK3-204ENST00000525975 CT47B1P0C2W7 299 aaPredicted RBP5.74□□□□□ -1.49
HIPK3-204ENST00000525975 U2AF2P26368 475 aaKnown RBP eCLIP5.74□□□□□ -1.493e-13■■■□□ 18
HIPK3-204ENST00000525975 TTC12Q9H892 705 aaPredicted RBP5.74□□□□□ -1.49
HIPK3-204ENST00000525975 CCDC141Q6ZP82 1450 aa5.74□□□□□ -1.49
HIPK3-204ENST00000525975 CROCC2H7BZ55 1655 aa5.74□□□□□ -1.49
HIPK3-204ENST00000525975 SYNMO15061 1565 aa5.74□□□□□ -1.49
HIPK3-204ENST00000525975 C17orf53Q8N3J3 647 aaPredicted RBP5.73□□□□□ -1.49
HIPK3-204ENST00000525975 IPO4Q8TEX9 1081 aaKnown RBP5.73□□□□□ -1.49
HIPK3-204ENST00000525975 SSH1Q8WYL5 1049 aa5.73□□□□□ -1.49
HIPK3-204ENST00000525975 USP25Q9UHP3 1055 aa5.73□□□□□ -1.49
HIPK3-204ENST00000525975 SHANK2Q9UPX8 1470 aa5.73□□□□□ -1.49
HIPK3-204ENST00000525975 PTPRGP23470 1445 aa5.73□□□□□ -1.49
HIPK3-204ENST00000525975 POLR3AO14802 1390 aaPredicted RBP5.73□□□□□ -1.49
HIPK3-204ENST00000525975 LAMC1P11047 1609 aa5.73□□□□□ -1.49
HIPK3-204ENST00000525975 CCDC66A2RUB6 948 aa5.73□□□□□ -1.49
HIPK3-204ENST00000525975 FOXD4L6Q3SYB3 417 aaPredicted RBP5.73□□□□□ -1.49
HIPK3-204ENST00000525975 FOXD4L3Q6VB84 417 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms