RNA–Protein interactions for RNA: ENST00000525395.2

LRRK1-203, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-203ENST00000525395 VPS72Q15906 364 aa13.67□□□□□ -0.22
LRRK1-203ENST00000525395 SRPK2P78362 688 aaKnown RBP13.66□□□□□ -0.22
LRRK1-203ENST00000525395 BTG4Q9NY30 223 aa13.66□□□□□ -0.22
LRRK1-203ENST00000525395 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.66□□□□□ -0.22
LRRK1-203ENST00000525395 POLR3AO14802 1390 aaPredicted RBP13.66□□□□□ -0.22
LRRK1-203ENST00000525395 SEPT12Q8IYM1 358 aa13.65□□□□□ -0.22
LRRK1-203ENST00000525395 CCDC9Q9Y3X0 531 aaKnown RBP13.65□□□□□ -0.22
LRRK1-203ENST00000525395 EP400Q96L91 3159 aa13.64□□□□□ -0.23
LRRK1-203ENST00000525395 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
LRRK1-203ENST00000525395 ATAD2Q6PL18 1390 aa13.64□□□□□ -0.23
LRRK1-203ENST00000525395 ONECUT3O60422 494 aaPredicted RBP13.64□□□□□ -0.23
LRRK1-203ENST00000525395 CHRNA2Q15822 529 aa13.64□□□□□ -0.23
LRRK1-203ENST00000525395 CRYBG1Q9Y4K1 1723 aa13.64□□□□□ -0.23
LRRK1-203ENST00000525395 TOPAZ1Q8N9V7 1692 aa13.63□□□□□ -0.23
LRRK1-203ENST00000525395 ZC3H6P61129 1189 aaKnown RBP13.63□□□□□ -0.23
LRRK1-203ENST00000525395 CABP1Q9NZU7 370 aa13.63□□□□□ -0.23
LRRK1-203ENST00000525395 TRPM1Q7Z4N2 1603 aa13.63□□□□□ -0.23
LRRK1-203ENST00000525395 PPIP5K1Q6PFW1 1433 aa13.62□□□□□ -0.23
LRRK1-203ENST00000525395 ITSN1Q15811 1721 aa13.61□□□□□ -0.23
LRRK1-203ENST00000525395 ROCK2O75116 1388 aaKnown RBP13.61□□□□□ -0.23
LRRK1-203ENST00000525395 KIAA0232Q92628 1395 aa13.61□□□□□ -0.23
LRRK1-203ENST00000525395 QRICH2Q9H0J4 1663 aa13.61□□□□□ -0.23
LRRK1-203ENST00000525395 FAM98CQ17RN3 349 aaKnown RBP13.61□□□□□ -0.23
LRRK1-203ENST00000525395 ABTB2Q8N961 1025 aa13.61□□□□□ -0.23
LRRK1-203ENST00000525395 PRDM11Q9NQV5 511 aa13.61□□□□□ -0.23
LRRK1-203ENST00000525395 BRWD3Q6RI45 1802 aa13.61□□□□□ -0.23
LRRK1-203ENST00000525395 NWD2Q9ULI1 1742 aa13.61□□□□□ -0.23
LRRK1-203ENST00000525395 NRAPQ86VF7 1730 aa13.6□□□□□ -0.23
LRRK1-203ENST00000525395 FAM182BQ5T319 152 aa13.59□□□□□ -0.23
LRRK1-203ENST00000525395 SPATA31A5Q5VU36 1347 aa13.59□□□□□ -0.23
LRRK1-203ENST00000525395 SPATA31A7Q8IWB4 1347 aa13.59□□□□□ -0.23
LRRK1-203ENST00000525395 COL14A1Q05707 1796 aaKnown RBP13.58□□□□□ -0.23
LRRK1-203ENST00000525395 KRT27Q7Z3Y8 459 aa13.57□□□□□ -0.24
LRRK1-203ENST00000525395 DEFB132Q7Z7B7 95 aa13.57□□□□□ -0.24
LRRK1-203ENST00000525395 STRN4Q9NRL3 753 aa13.57□□□□□ -0.24
LRRK1-203ENST00000525395 USP19O94966 1318 aa13.57□□□□□ -0.24
LRRK1-203ENST00000525395 EVC2Q86UK5 1308 aa13.57□□□□□ -0.24
LRRK1-203ENST00000525395 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
LRRK1-203ENST00000525395 SSH2Q76I76 1423 aa13.56□□□□□ -0.24
LRRK1-203ENST00000525395 A0A0G2JS52 829 aa13.56□□□□□ -0.24
LRRK1-203ENST00000525395 GCP02774 474 aa13.56□□□□□ -0.24
LRRK1-203ENST00000525395 MYT1Q01538 1121 aa13.56□□□□□ -0.24
LRRK1-203ENST00000525395 USP6P35125 1406 aa13.56□□□□□ -0.24
LRRK1-203ENST00000525395 NLRP13Q86W25 1043 aa13.55□□□□□ -0.24
LRRK1-203ENST00000525395 CCDC125Q86Z20 511 aa13.55□□□□□ -0.24
LRRK1-203ENST00000525395 CARD11Q9BXL7 1154 aa13.55□□□□□ -0.24
LRRK1-203ENST00000525395 CAMTA1Q9Y6Y1 1673 aa13.55□□□□□ -0.24
LRRK1-203ENST00000525395 SPATA31A1Q5TZJ5 1347 aa13.55□□□□□ -0.24
LRRK1-203ENST00000525395 LARP1Q6PKG0 1096 aaKnown RBP13.54□□□□□ -0.24
LRRK1-203ENST00000525395 USP35Q9P2H5 1018 aa13.54□□□□□ -0.24
LRRK1-203ENST00000525395 NRKQ7Z2Y5 1582 aa13.54□□□□□ -0.24
LRRK1-203ENST00000525395 NLRP6P59044 892 aa13.53□□□□□ -0.24
LRRK1-203ENST00000525395 TONSLQ96HA7 1378 aa13.53□□□□□ -0.24
LRRK1-203ENST00000525395 BLMP54132 1417 aaPredicted RBP13.53□□□□□ -0.24
LRRK1-203ENST00000525395 EVA1CP58658 441 aa13.52□□□□□ -0.25
LRRK1-203ENST00000525395 ZRANB1Q9UGI0 708 aa13.52□□□□□ -0.25
LRRK1-203ENST00000525395 TTC21BQ7Z4L5 1316 aa13.52□□□□□ -0.25
LRRK1-203ENST00000525395 CPDO75976 1380 aa13.52□□□□□ -0.25
LRRK1-203ENST00000525395 ZBTB7CA1YPR0 619 aa13.51□□□□□ -0.25
LRRK1-203ENST00000525395 CPSF1Q10570 1443 aaKnown RBP13.5□□□□□ -0.25
LRRK1-203ENST00000525395 ZNF692Q9BU19 519 aaPredicted RBP13.5□□□□□ -0.25
LRRK1-203ENST00000525395 PCGF6Q9BYE7 350 aa13.5□□□□□ -0.25
LRRK1-203ENST00000525395 SLC12A5Q9H2X9 1139 aa13.5□□□□□ -0.25
LRRK1-203ENST00000525395 AXIN2Q9Y2T1 843 aa13.5□□□□□ -0.25
LRRK1-203ENST00000525395 SRCAPQ6ZRS2 3230 aa13.5□□□□□ -0.25
LRRK1-203ENST00000525395 LMO7Q8WWI1 1683 aa13.5□□□□□ -0.25
LRRK1-203ENST00000525395 THSD7AQ9UPZ6 1657 aa13.5□□□□□ -0.25
LRRK1-203ENST00000525395 BRD4O60885 1362 aaPredicted RBP13.49□□□□□ -0.25
LRRK1-203ENST00000525395 PIK3C2AO00443 1686 aa13.49□□□□□ -0.25
LRRK1-203ENST00000525395 SOX12O15370 315 aa13.48□□□□□ -0.25
LRRK1-203ENST00000525395 TESK2Q96S53 571 aa13.48□□□□□ -0.25
LRRK1-203ENST00000525395 SLIT3O75094 1523 aa13.48□□□□□ -0.25
LRRK1-203ENST00000525395 CD163L1Q9NR16 1453 aa13.48□□□□□ -0.25
LRRK1-203ENST00000525395 SBNO2Q9Y2G9 1366 aa13.47□□□□□ -0.25
LRRK1-203ENST00000525395 ST20-MTHFSA0A0A6YYL1 179 aa13.47□□□□□ -0.25
LRRK1-203ENST00000525395 BARGINQ6ZT62 677 aa13.47□□□□□ -0.25
LRRK1-203ENST00000525395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.47□□□□□ -0.25
LRRK1-203ENST00000525395 KTN1Q86UP2 1357 aaKnown RBP13.46□□□□□ -0.25
LRRK1-203ENST00000525395 EN1Q05925 392 aaPredicted RBP13.46□□□□□ -0.25
LRRK1-203ENST00000525395 SF3B2Q13435 895 aaKnown RBP13.46□□□□□ -0.25
LRRK1-203ENST00000525395 ARHGEF25Q86VW2 580 aa13.46□□□□□ -0.25
LRRK1-203ENST00000525395 TCP11L2Q8N4U5 519 aa13.46□□□□□ -0.25
LRRK1-203ENST00000525395 TMC1Q8TDI8 760 aa13.46□□□□□ -0.25
LRRK1-203ENST00000525395 COL5A2P05997 1499 aaPredicted RBP13.46□□□□□ -0.25
LRRK1-203ENST00000525395 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
LRRK1-203ENST00000525395 AKAP12Q02952 1782 aa13.45□□□□□ -0.26
LRRK1-203ENST00000525395 TRIM37O94972 964 aa13.45□□□□□ -0.26
LRRK1-203ENST00000525395 NME9Q86XW9 330 aa13.45□□□□□ -0.26
LRRK1-203ENST00000525395 TTC21AQ8NDW8 1320 aa13.44□□□□□ -0.26
LRRK1-203ENST00000525395 COL18A1P39060 1754 aa13.44□□□□□ -0.26
LRRK1-203ENST00000525395 BAG6P46379 1132 aa13.42□□□□□ -0.26
LRRK1-203ENST00000525395 PDE3BQ13370 1112 aa13.42□□□□□ -0.26
LRRK1-203ENST00000525395 EZH2Q15910 746 aaKnown RBP13.42□□□□□ -0.26
LRRK1-203ENST00000525395 FAM196AQ6ZSG2 479 aa13.42□□□□□ -0.26
LRRK1-203ENST00000525395 CRB1P82279 1406 aa13.41□□□□□ -0.26
LRRK1-203ENST00000525395 TOM1L2Q6ZVM7 507 aa13.41□□□□□ -0.26
LRRK1-203ENST00000525395 KCNH5Q8NCM2 988 aa13.41□□□□□ -0.26
LRRK1-203ENST00000525395 THRAP3Q9Y2W1 955 aaKnown RBP13.41□□□□□ -0.26
LRRK1-203ENST00000525395 NFAT5O94916 1531 aa13.4□□□□□ -0.26
LRRK1-203ENST00000525395 MON2Q7Z3U7 1717 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms