RNA–Protein interactions for RNA: ENST00000524995.5

SLC43A1-202, Transcript of solute carrier family 43 member 1, humanhuman

TSL 3

Gene SLC43A1, Length 953 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-202ENST00000524995 SLIT2O94813 1529 aa28.38■■■□□ 2.13
SLC43A1-202ENST00000524995 ITSN1Q15811 1721 aa28.38■■■□□ 2.13
SLC43A1-202ENST00000524995 GJD4Q96KN9 370 aaPredicted RBP28.37■■■□□ 2.13
SLC43A1-202ENST00000524995 TOPAZ1Q8N9V7 1692 aa28.36■■■□□ 2.13
SLC43A1-202ENST00000524995 PLEKHG3A1L390 1219 aa28.36■■■□□ 2.13
SLC43A1-202ENST00000524995 TONSLQ96HA7 1378 aa28.35■■■□□ 2.13
SLC43A1-202ENST00000524995 CABP1Q9NZU7 370 aa28.34■■■□□ 2.13
SLC43A1-202ENST00000524995 PPIP5K1Q6PFW1 1433 aa28.34■■■□□ 2.13
SLC43A1-202ENST00000524995 CCDC9Q9Y3X0 531 aaKnown RBP28.32■■■□□ 2.12
SLC43A1-202ENST00000524995 POLR3AO14802 1390 aaPredicted RBP28.32■■■□□ 2.12
SLC43A1-202ENST00000524995 PLCH1Q4KWH8 1693 aa28.31■■■□□ 2.12
SLC43A1-202ENST00000524995 GLI3P10071 1580 aa28.3■■■□□ 2.12
SLC43A1-202ENST00000524995 RALGAPBQ86X10 1494 aa28.3■■■□□ 2.12
SLC43A1-202ENST00000524995 CARD11Q9BXL7 1154 aa28.29■■■□□ 2.12
SLC43A1-202ENST00000524995 BTG4Q9NY30 223 aa28.29■■■□□ 2.12
SLC43A1-202ENST00000524995 ZC3H6P61129 1189 aaKnown RBP28.28■■■□□ 2.12
SLC43A1-202ENST00000524995 CHRNA2Q15822 529 aa28.28■■■□□ 2.12
SLC43A1-202ENST00000524995 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.26■■■□□ 2.12
SLC43A1-202ENST00000524995 CRYBG1Q9Y4K1 1723 aa28.26■■■□□ 2.12
SLC43A1-202ENST00000524995 EVC2Q86UK5 1308 aa28.26■■■□□ 2.11
SLC43A1-202ENST00000524995 ABTB2Q8N961 1025 aa28.26■■■□□ 2.11
SLC43A1-202ENST00000524995 VPS72Q15906 364 aa28.25■■■□□ 2.11
SLC43A1-202ENST00000524995 PRDM11Q9NQV5 511 aa28.23■■■□□ 2.11
SLC43A1-202ENST00000524995 KIAA0232Q92628 1395 aa28.23■■■□□ 2.11
SLC43A1-202ENST00000524995 SEPT12Q8IYM1 358 aa28.2■■■□□ 2.1
SLC43A1-202ENST00000524995 NWD2Q9ULI1 1742 aa28.2■■■□□ 2.1
SLC43A1-202ENST00000524995 PHRF1Q9P1Y6 1649 aaKnown RBP28.18■■■□□ 2.1
SLC43A1-202ENST00000524995 NRAPQ86VF7 1730 aa28.18■■■□□ 2.1
SLC43A1-202ENST00000524995 COL14A1Q05707 1796 aaKnown RBP28.18■■■□□ 2.1
SLC43A1-202ENST00000524995 STRN4Q9NRL3 753 aa28.17■■■□□ 2.1
SLC43A1-202ENST00000524995 BRWD3Q6RI45 1802 aa28.17■■■□□ 2.1
SLC43A1-202ENST00000524995 ATAD2Q6PL18 1390 aa28.16■■■□□ 2.1
SLC43A1-202ENST00000524995 ZBTB7CA1YPR0 619 aa28.16■■■□□ 2.1
SLC43A1-202ENST00000524995 FAM98CQ17RN3 349 aaKnown RBP28.16■■■□□ 2.1
SLC43A1-202ENST00000524995 A0A0G2JS52 829 aa28.15■■■□□ 2.1
SLC43A1-202ENST00000524995 MYT1Q01538 1121 aa28.15■■■□□ 2.1
SLC43A1-202ENST00000524995 USP6P35125 1406 aa28.15■■■□□ 2.1
SLC43A1-202ENST00000524995 NLRP6P59044 892 aa28.13■■■□□ 2.09
SLC43A1-202ENST00000524995 NLRP13Q86W25 1043 aa28.12■■■□□ 2.09
SLC43A1-202ENST00000524995 GCP02774 474 aa28.11■■■□□ 2.09
SLC43A1-202ENST00000524995 USP19O94966 1318 aa28.11■■■□□ 2.09
SLC43A1-202ENST00000524995 ONECUT3O60422 494 aaPredicted RBP28.1■■■□□ 2.09
SLC43A1-202ENST00000524995 TMC1Q8TDI8 760 aa28.1■■■□□ 2.09
SLC43A1-202ENST00000524995 NRKQ7Z2Y5 1582 aa28.1■■■□□ 2.09
SLC43A1-202ENST00000524995 SSH2Q76I76 1423 aa28.09■■■□□ 2.09
SLC43A1-202ENST00000524995 ST20-MTHFSA0A0A6YYL1 179 aa28.09■■■□□ 2.09
SLC43A1-202ENST00000524995 SOX12O15370 315 aa28.09■■■□□ 2.09
SLC43A1-202ENST00000524995 FAM182BQ5T319 152 aa28.09■■■□□ 2.09
SLC43A1-202ENST00000524995 USP35Q9P2H5 1018 aa28.09■■■□□ 2.09
SLC43A1-202ENST00000524995 ZRANB1Q9UGI0 708 aa28.09■■■□□ 2.09
SLC43A1-202ENST00000524995 SPATA31A5Q5VU36 1347 aa28.09■■■□□ 2.09
SLC43A1-202ENST00000524995 SPATA31A7Q8IWB4 1347 aa28.09■■■□□ 2.09
SLC43A1-202ENST00000524995 SLC12A5Q9H2X9 1139 aa28.08■■■□□ 2.09
SLC43A1-202ENST00000524995 TTC21BQ7Z4L5 1316 aa28.08■■■□□ 2.09
SLC43A1-202ENST00000524995 EVA1CP58658 441 aa28.06■■■□□ 2.08
SLC43A1-202ENST00000524995 LARP1Q6PKG0 1096 aaKnown RBP28.05■■■□□ 2.08
SLC43A1-202ENST00000524995 KRT27Q7Z3Y8 459 aa28.05■■■□□ 2.08
SLC43A1-202ENST00000524995 CAMTA1Q9Y6Y1 1673 aa28.05■■■□□ 2.08
SLC43A1-202ENST00000524995 AKAP12Q02952 1782 aa28.04■■■□□ 2.08
SLC43A1-202ENST00000524995 PIK3C2AO00443 1686 aa28.04■■■□□ 2.08
SLC43A1-202ENST00000524995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.04■■■□□ 2.08
SLC43A1-202ENST00000524995 KTN1Q86UP2 1357 aaKnown RBP28.03■■■□□ 2.08
SLC43A1-202ENST00000524995 CCER1Q8TC90 406 aaPredicted RBP28.03■■■□□ 2.08
SLC43A1-202ENST00000524995 TESK2Q96S53 571 aa28.03■■■□□ 2.08
SLC43A1-202ENST00000524995 ZNF692Q9BU19 519 aaPredicted RBP28.03■■■□□ 2.08
SLC43A1-202ENST00000524995 CPSF1Q10570 1443 aaKnown RBP28.02■■■□□ 2.08
SLC43A1-202ENST00000524995 SBNO2Q9Y2G9 1366 aa28.02■■■□□ 2.08
SLC43A1-202ENST00000524995 SPATA31A1Q5TZJ5 1347 aa28.01■■■□□ 2.07
SLC43A1-202ENST00000524995 BRD4O60885 1362 aaPredicted RBP27.99■■■□□ 2.07
SLC43A1-202ENST00000524995 DEFB132Q7Z7B7 95 aa27.99■■■□□ 2.07
SLC43A1-202ENST00000524995 CD163L1Q9NR16 1453 aa27.99■■■□□ 2.07
SLC43A1-202ENST00000524995 CPDO75976 1380 aa27.99■■■□□ 2.07
SLC43A1-202ENST00000524995 NME9Q86XW9 330 aa27.98■■■□□ 2.07
SLC43A1-202ENST00000524995 LMO7Q8WWI1 1683 aa27.97■■■□□ 2.07
SLC43A1-202ENST00000524995 AXIN2Q9Y2T1 843 aa27.97■■■□□ 2.07
SLC43A1-202ENST00000524995 SLIT3O75094 1523 aa27.97■■■□□ 2.07
SLC43A1-202ENST00000524995 MON2Q7Z3U7 1717 aa27.93■■■□□ 2.06
SLC43A1-202ENST00000524995 TTC21AQ8NDW8 1320 aa27.92■■■□□ 2.06
SLC43A1-202ENST00000524995 CLSPNQ9HAW4 1339 aa27.92■■■□□ 2.06
SLC43A1-202ENST00000524995 USP47Q96K76 1375 aa27.92■■■□□ 2.06
SLC43A1-202ENST00000524995 HDGFL2Q7Z4V5 671 aaPredicted RBP27.91■■■□□ 2.06
SLC43A1-202ENST00000524995 THSD7AQ9UPZ6 1657 aa27.91■■■□□ 2.06
SLC43A1-202ENST00000524995 COL5A2P05997 1499 aaPredicted RBP27.9■■■□□ 2.06
SLC43A1-202ENST00000524995 CCDC125Q86Z20 511 aa27.9■■■□□ 2.06
SLC43A1-202ENST00000524995 BLMP54132 1417 aaPredicted RBP27.9■■■□□ 2.06
SLC43A1-202ENST00000524995 EP400Q96L91 3159 aa27.89■■■□□ 2.06
SLC43A1-202ENST00000524995 A0A1W2PP64 1363 aa27.89■■■□□ 2.06
SLC43A1-202ENST00000524995 COL18A1P39060 1754 aa27.89■■■□□ 2.06
SLC43A1-202ENST00000524995 ARHGEF25Q86VW2 580 aa27.89■■■□□ 2.06
SLC43A1-202ENST00000524995 TCP11L2Q8N4U5 519 aa27.88■■■□□ 2.05
SLC43A1-202ENST00000524995 RGPD5Q99666 1765 aa27.88■■■□□ 2.05
SLC43A1-202ENST00000524995 AATKQ6ZMQ8 1374 aa27.87■■■□□ 2.05
SLC43A1-202ENST00000524995 KCNH5Q8NCM2 988 aa27.85■■■□□ 2.05
SLC43A1-202ENST00000524995 TERF2IPQ9NYB0 399 aa27.85■■■□□ 2.05
SLC43A1-202ENST00000524995 SF3B2Q13435 895 aaKnown RBP27.84■■■□□ 2.05
SLC43A1-202ENST00000524995 BARGINQ6ZT62 677 aa27.84■■■□□ 2.05
SLC43A1-202ENST00000524995 TOM1L2Q6ZVM7 507 aa27.84■■■□□ 2.05
SLC43A1-202ENST00000524995 NFAT5O94916 1531 aa27.83■■■□□ 2.05
SLC43A1-202ENST00000524995 FBLN1P23142 703 aa27.83■■■□□ 2.05
SLC43A1-202ENST00000524995 PUS7Q96PZ0 661 aaKnown RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms