RNA–Protein interactions for RNA: ENST00000524783.1

AMBRA1-203, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 427 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-203ENST00000524783 PDE4CQ08493 712 aa7.1□□□□□ -1.27
AMBRA1-203ENST00000524783 SEMA3FQ13275 785 aa7.1□□□□□ -1.27
AMBRA1-203ENST00000524783 CFAP70Q5T0N1 1121 aa7.1□□□□□ -1.27
AMBRA1-203ENST00000524783 SCUBE3Q8IX30 993 aa7.1□□□□□ -1.27
AMBRA1-203ENST00000524783 TSR3Q9UJK0 312 aaKnown RBP7.1□□□□□ -1.27
AMBRA1-203ENST00000524783 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.09□□□□□ -1.27
AMBRA1-203ENST00000524783 PALM3A6NDB9 673 aaPredicted RBP7.09□□□□□ -1.27
AMBRA1-203ENST00000524783 NR1I2O75469 434 aa7.09□□□□□ -1.27
AMBRA1-203ENST00000524783 FMNL1O95466 1100 aaPredicted RBP7.09□□□□□ -1.27
AMBRA1-203ENST00000524783 BCAMP50895 628 aa7.09□□□□□ -1.27
AMBRA1-203ENST00000524783 AEBP1Q8IUX7 1158 aa7.09□□□□□ -1.27
AMBRA1-203ENST00000524783 PLA2G2EQ9NZK7 142 aa7.09□□□□□ -1.27
AMBRA1-203ENST00000524783 PCDHB3Q9Y5E6 796 aa7.09□□□□□ -1.27
AMBRA1-203ENST00000524783 EIF4G2P78344 907 aaKnown RBP eCLIP7.08□□□□□ -1.28
AMBRA1-203ENST00000524783 WNT2BQ93097 391 aa7.08□□□□□ -1.28
AMBRA1-203ENST00000524783 TFIP11Q9UBB9 837 aaKnown RBP7.08□□□□□ -1.28
AMBRA1-203ENST00000524783 LMOD1P29536 600 aaPredicted RBP7.07□□□□□ -1.28
AMBRA1-203ENST00000524783 PTPN5P54829 565 aa7.07□□□□□ -1.28
AMBRA1-203ENST00000524783 SRPK2P78362 688 aaKnown RBP7.07□□□□□ -1.28
AMBRA1-203ENST00000524783 NR1H3Q13133 447 aa7.07□□□□□ -1.28
AMBRA1-203ENST00000524783 THAP11Q96EK4 314 aa7.07□□□□□ -1.28
AMBRA1-203ENST00000524783 UCN2Q96RP3 112 aa7.07□□□□□ -1.28
AMBRA1-203ENST00000524783 CC2D2AQ9P2K1 1620 aa7.06□□□□□ -1.28
AMBRA1-203ENST00000524783 JUNDP17535 347 aa7.06□□□□□ -1.28
AMBRA1-203ENST00000524783 THSD4Q6ZMP0 1018 aa7.06□□□□□ -1.28
AMBRA1-203ENST00000524783 FKBPLQ9UIM3 349 aa7.06□□□□□ -1.28
AMBRA1-203ENST00000524783 CCDC9Q9Y3X0 531 aaKnown RBP7.06□□□□□ -1.28
AMBRA1-203ENST00000524783 ZBBXA8MT70 800 aa7.05□□□□□ -1.28
AMBRA1-203ENST00000524783 F12P00748 615 aaPredicted RBP7.05□□□□□ -1.28
AMBRA1-203ENST00000524783 FBXO45P0C2W1 286 aa7.05□□□□□ -1.28
AMBRA1-203ENST00000524783 CSB-PGBD3P0DP91 1061 aa7.05□□□□□ -1.28
AMBRA1-203ENST00000524783 PTPRNQ16849 979 aa7.05□□□□□ -1.28
AMBRA1-203ENST00000524783 CTHP32929 405 aa7.04□□□□□ -1.28
AMBRA1-203ENST00000524783 TBC1D9Q6ZT07 1266 aa7.04□□□□□ -1.28
AMBRA1-203ENST00000524783 WBP1LQ9NX94 342 aa7.04□□□□□ -1.28
AMBRA1-203ENST00000524783 MAP10Q9P2G4 905 aa7.04□□□□□ -1.28
AMBRA1-203ENST00000524783 USTQ9Y2C2 406 aa7.04□□□□□ -1.28
AMBRA1-203ENST00000524783 MAFBQ9Y5Q3 323 aaPredicted RBP7.04□□□□□ -1.28
AMBRA1-203ENST00000524783 ZC3H4Q9UPT8 1303 aaKnown RBP7.03□□□□□ -1.28
AMBRA1-203ENST00000524783 CDCA8Q53HL2 280 aa7.03□□□□□ -1.28
AMBRA1-203ENST00000524783 CECR2Q9BXF3 1484 aa7.03□□□□□ -1.28
AMBRA1-203ENST00000524783 BAZ1AQ9NRL2 1556 aaPredicted RBP7.03□□□□□ -1.28
AMBRA1-203ENST00000524783 SMARCA4P51532 1647 aa7.02□□□□□ -1.29
AMBRA1-203ENST00000524783 ATP9BO43861 1147 aa7.02□□□□□ -1.29
AMBRA1-203ENST00000524783 MSS51Q4VC12 460 aa7.02□□□□□ -1.29
AMBRA1-203ENST00000524783 SPSB2Q99619 263 aa7.02□□□□□ -1.29
AMBRA1-203ENST00000524783 PEG3Q9GZU2 1588 aa7.02□□□□□ -1.29
AMBRA1-203ENST00000524783 NCAPD3P42695 1498 aa7.01□□□□□ -1.29
AMBRA1-203ENST00000524783 DXOO77932 396 aaKnown RBP7.01□□□□□ -1.29
AMBRA1-203ENST00000524783 CCNYL3P0C7X3 344 aa7.01□□□□□ -1.29
AMBRA1-203ENST00000524783 FAM160A2Q8N612 972 aaPredicted RBP7.01□□□□□ -1.29
AMBRA1-203ENST00000524783 ARMC2Q8NEN0 867 aa7.01□□□□□ -1.29
AMBRA1-203ENST00000524783 EVA1BQ9NVM1 165 aa7.01□□□□□ -1.29
AMBRA1-203ENST00000524783 ATG7O95352 703 aa7□□□□□ -1.29
AMBRA1-203ENST00000524783 COPS2P61201 443 aa7□□□□□ -1.29
AMBRA1-203ENST00000524783 KCNH2Q12809 1159 aa7□□□□□ -1.29
AMBRA1-203ENST00000524783 NYAP1Q6ZVC0 841 aa7□□□□□ -1.29
AMBRA1-203ENST00000524783 NUDT12Q9BQG2 462 aa7□□□□□ -1.29
AMBRA1-203ENST00000524783 PIK3CDO00329 1044 aa6.99□□□□□ -1.29
AMBRA1-203ENST00000524783 MMP16P51512 607 aa6.99□□□□□ -1.29
AMBRA1-203ENST00000524783 PTK2Q05397 1052 aa6.99□□□□□ -1.29
AMBRA1-203ENST00000524783 PDXDC2PQ6P474 469 aa6.99□□□□□ -1.29
AMBRA1-203ENST00000524783 NFATC2IPQ8NCF5 419 aa6.99□□□□□ -1.29
AMBRA1-203ENST00000524783 GZF1Q9H116 711 aaPredicted RBP6.99□□□□□ -1.29
AMBRA1-203ENST00000524783 VRTNQ9H8Y1 702 aa6.99□□□□□ -1.29
AMBRA1-203ENST00000524783 GPSM3Q9Y4H4 160 aa6.99□□□□□ -1.29
AMBRA1-203ENST00000524783 SMARCA2P51531 1590 aa6.99□□□□□ -1.29
AMBRA1-203ENST00000524783 ATAD2BQ9ULI0 1458 aa6.98□□□□□ -1.29
AMBRA1-203ENST00000524783 HMGXB3Q12766 1538 aa6.98□□□□□ -1.29
AMBRA1-203ENST00000524783 PATL2C9JE40 543 aaKnown RBP6.98□□□□□ -1.29
AMBRA1-203ENST00000524783 BRD1O95696 1058 aa6.98□□□□□ -1.29
AMBRA1-203ENST00000524783 IFFO2Q5TF58 517 aa6.98□□□□□ -1.29
AMBRA1-203ENST00000524783 GPKOWQ92917 476 aaPredicted RBP eCLIP6.98□□□□□ -1.29
AMBRA1-203ENST00000524783 PRDM9Q9NQV7 894 aa6.98□□□□□ -1.29
AMBRA1-203ENST00000524783 CARNS1A5YM72 827 aa6.97□□□□□ -1.29
AMBRA1-203ENST00000524783 SKIP12755 728 aa6.97□□□□□ -1.29
AMBRA1-203ENST00000524783 KCNA1Q09470 495 aa6.97□□□□□ -1.29
AMBRA1-203ENST00000524783 KANK4Q5T7N3 995 aaPredicted RBP6.97□□□□□ -1.29
AMBRA1-203ENST00000524783 NBPF14Q5TI25 921 aa6.97□□□□□ -1.29
AMBRA1-203ENST00000524783 NPM2Q86SE8 214 aaKnown RBP6.97□□□□□ -1.29
AMBRA1-203ENST00000524783 ZNF592Q92610 1267 aa6.97□□□□□ -1.29
AMBRA1-203ENST00000524783 MROH2BQ7Z745 1585 aa6.96□□□□□ -1.29
AMBRA1-203ENST00000524783 ZPR1O75312 459 aa6.96□□□□□ -1.3
AMBRA1-203ENST00000524783 ADH1BP00325 375 aa6.96□□□□□ -1.3
AMBRA1-203ENST00000524783 RANGAP1P46060 587 aaPredicted RBP6.96□□□□□ -1.3
AMBRA1-203ENST00000524783 MCCD1P59942 119 aaPredicted RBP6.96□□□□□ -1.3
AMBRA1-203ENST00000524783 PCDHB9Q9Y5E1 797 aa6.96□□□□□ -1.3
AMBRA1-203ENST00000524783 USP17L3A6NCW0 530 aa6.95□□□□□ -1.3
AMBRA1-203ENST00000524783 USP17L4A6NCW7 530 aa6.95□□□□□ -1.3
AMBRA1-203ENST00000524783 TMEM88BA6NKF7 163 aa6.95□□□□□ -1.3
AMBRA1-203ENST00000524783 USP17L5A8MUK1 530 aa6.95□□□□□ -1.3
AMBRA1-203ENST00000524783 TLL1O43897 1013 aa6.95□□□□□ -1.3
AMBRA1-203ENST00000524783 SLFNL1Q499Z3 407 aa6.95□□□□□ -1.3
AMBRA1-203ENST00000524783 TMCO4Q5TGY1 634 aa6.95□□□□□ -1.3
AMBRA1-203ENST00000524783 USP17L2Q6R6M4 530 aa6.95□□□□□ -1.3
AMBRA1-203ENST00000524783 USP17L1Q7RTZ2 530 aa6.95□□□□□ -1.3
AMBRA1-203ENST00000524783 PLEKHM2Q8IWE5 1019 aa6.95□□□□□ -1.3
AMBRA1-203ENST00000524783 CCDC24Q8N4L8 307 aa6.95□□□□□ -1.3
AMBRA1-203ENST00000524783 FAM174AQ8TBP5 190 aa6.95□□□□□ -1.3
AMBRA1-203ENST00000524783 OCSTAMPQ9BR26 566 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms