RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.12
CSTF3-205ENST00000524775 MTHFSP49914 203 aa15.77■□□□□ 0.12
CSTF3-205ENST00000524775 NME9Q86XW9 330 aa15.77■□□□□ 0.12
CSTF3-205ENST00000524775 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.77■□□□□ 0.12
CSTF3-205ENST00000524775 ZRANB1Q9UGI0 708 aa15.77■□□□□ 0.12
CSTF3-205ENST00000524775 PIK3C2AO00443 1686 aa15.76■□□□□ 0.11
CSTF3-205ENST00000524775 TTC21BQ7Z4L5 1316 aa15.76■□□□□ 0.11
CSTF3-205ENST00000524775 PNPLA6Q8IY17 1366 aa15.75■□□□□ 0.11
CSTF3-205ENST00000524775 PROSER2Q86WR7 435 aaPredicted RBP15.74■□□□□ 0.11
CSTF3-205ENST00000524775 OVOS2A0A0J9YW53 1432 aa15.74■□□□□ 0.11
CSTF3-205ENST00000524775 OVOS2Q6IE36 1432 aa15.74■□□□□ 0.11
CSTF3-205ENST00000524775 SMG6Q86US8 1419 aaKnown RBP15.74■□□□□ 0.11
CSTF3-205ENST00000524775 NCOA3Q9Y6Q9 1424 aa15.74■□□□□ 0.11
CSTF3-205ENST00000524775 PMFBP1Q8TBY8 1022 aa15.73■□□□□ 0.11
CSTF3-205ENST00000524775 AATKQ6ZMQ8 1374 aa15.73■□□□□ 0.11
CSTF3-205ENST00000524775 USP31Q70CQ4 1352 aa15.72■□□□□ 0.11
CSTF3-205ENST00000524775 FBLN1P23142 703 aa15.71■□□□□ 0.11
CSTF3-205ENST00000524775 WDR43Q15061 677 aaKnown RBP eCLIP15.71■□□□□ 0.11
CSTF3-205ENST00000524775 POLKQ9UBT6 870 aa15.71■□□□□ 0.11
CSTF3-205ENST00000524775 GTF3C3Q9Y5Q9 886 aa15.71■□□□□ 0.11
CSTF3-205ENST00000524775 TTC21AQ8NDW8 1320 aa15.7■□□□□ 0.1
CSTF3-205ENST00000524775 SENP3-EIF4A1A0A087X0R7 540 aa15.7■□□□□ 0.1
CSTF3-205ENST00000524775 PEAK1Q9H792 1746 aa15.7■□□□□ 0.1
CSTF3-205ENST00000524775 TRPM3Q9HCF6 1732 aaPredicted RBP15.7■□□□□ 0.1
CSTF3-205ENST00000524775 PHF8Q9UPP1 1060 aa15.69■□□□□ 0.1
CSTF3-205ENST00000524775 TMEM94Q12767 1356 aa15.69■□□□□ 0.1
CSTF3-205ENST00000524775 KIF1AQ12756 1690 aa15.69■□□□□ 0.1
CSTF3-205ENST00000524775 LRRC7Q96NW7 1537 aa15.68■□□□□ 0.1
CSTF3-205ENST00000524775 NGDNQ8NEJ9 315 aaKnown RBP15.68■□□□□ 0.1
CSTF3-205ENST00000524775 CFAP53Q96M91 514 aa15.68■□□□□ 0.1
CSTF3-205ENST00000524775 C19orf44Q9H6X5 657 aa15.68■□□□□ 0.1
CSTF3-205ENST00000524775 DCCP43146 1447 aa15.68■□□□□ 0.1
CSTF3-205ENST00000524775 C1orf167Q5SNV9 1468 aa15.67■□□□□ 0.1
CSTF3-205ENST00000524775 CDK12Q9NYV4 1490 aaPredicted RBP15.67■□□□□ 0.1
CSTF3-205ENST00000524775 COG3Q96JB2 828 aa15.67■□□□□ 0.1
CSTF3-205ENST00000524775 MST1RQ04912 1400 aa15.67■□□□□ 0.1
CSTF3-205ENST00000524775 ZNF521Q96K83 1311 aa15.67■□□□□ 0.1
CSTF3-205ENST00000524775 IQSEC2Q5JU85 1478 aa15.66■□□□□ 0.1
CSTF3-205ENST00000524775 CCDC146Q8IYE0 955 aa15.64■□□□□ 0.09
CSTF3-205ENST00000524775 ORAI2Q96SN7 254 aa15.64■□□□□ 0.09
CSTF3-205ENST00000524775 EMILIN1Q9Y6C2 1016 aa15.64■□□□□ 0.09
CSTF3-205ENST00000524775 RGPD1P0DJD0 1748 aa15.63■□□□□ 0.09
CSTF3-205ENST00000524775 C14orf37Q86TY3 774 aa15.63■□□□□ 0.09
CSTF3-205ENST00000524775 ALS2Q96Q42 1657 aa15.63■□□□□ 0.09
CSTF3-205ENST00000524775 PDE3BQ13370 1112 aa15.62■□□□□ 0.09
CSTF3-205ENST00000524775 ESCO1Q5FWF5 840 aa15.62■□□□□ 0.09
CSTF3-205ENST00000524775 NUDCQ9Y266 331 aa15.62■□□□□ 0.09
CSTF3-205ENST00000524775 ZNF335Q9H4Z2 1342 aaPredicted RBP15.62■□□□□ 0.09
CSTF3-205ENST00000524775 LTN1O94822 1766 aa15.62■□□□□ 0.09
CSTF3-205ENST00000524775 APAF1O14727 1248 aa15.61■□□□□ 0.09
CSTF3-205ENST00000524775 DIAPH1O60610 1272 aaKnown RBP15.61■□□□□ 0.09
CSTF3-205ENST00000524775 IL13P35225 146 aa15.61■□□□□ 0.09
CSTF3-205ENST00000524775 RUNDC1Q96C34 613 aa15.61■□□□□ 0.09
CSTF3-205ENST00000524775 PLEKHF1Q96S99 279 aa15.61■□□□□ 0.09
CSTF3-205ENST00000524775 RRS1Q15050 365 aaKnown RBP15.6■□□□□ 0.09
CSTF3-205ENST00000524775 PHF23Q9BUL5 403 aaPredicted RBP15.6■□□□□ 0.09
CSTF3-205ENST00000524775 SALL2Q9Y467 1007 aaPredicted RBP15.6■□□□□ 0.09
CSTF3-205ENST00000524775 DLG5Q8TDM6 1919 aa15.6■□□□□ 0.09
CSTF3-205ENST00000524775 NFAT5O94916 1531 aa15.59■□□□□ 0.09
CSTF3-205ENST00000524775 PHRF1Q9P1Y6 1649 aaKnown RBP15.59■□□□□ 0.09
CSTF3-205ENST00000524775 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
CSTF3-205ENST00000524775 NGEFQ8N5V2 710 aa15.59■□□□□ 0.09
CSTF3-205ENST00000524775 CDCA7LQ96GN5 454 aa15.59■□□□□ 0.09
CSTF3-205ENST00000524775 U2AF1L5P0DN76 240 aaPredicted RBP15.58■□□□□ 0.08
CSTF3-205ENST00000524775 U2AF1Q01081 240 aaKnown RBP eCLIP15.58■□□□□ 0.088e-37■■■■□ 22.1
CSTF3-205ENST00000524775 TRMT2AQ8IZ69 625 aaKnown RBP15.58■□□□□ 0.08
CSTF3-205ENST00000524775 ATF3P18847 181 aa15.57■□□□□ 0.08
CSTF3-205ENST00000524775 SLIT3O75094 1523 aa15.57■□□□□ 0.08
CSTF3-205ENST00000524775 FOXO3O43524 673 aa15.56■□□□□ 0.08
CSTF3-205ENST00000524775 NLRP6P59044 892 aa15.56■□□□□ 0.08
CSTF3-205ENST00000524775 PSME1Q06323 249 aa15.56■□□□□ 0.08
CSTF3-205ENST00000524775 CADPS2Q86UW7 1296 aa15.56■□□□□ 0.08
CSTF3-205ENST00000524775 TCP11L2Q8N4U5 519 aa15.56■□□□□ 0.08
CSTF3-205ENST00000524775 SUPT16HQ9Y5B9 1047 aaKnown RBP15.56■□□□□ 0.08
CSTF3-205ENST00000524775 MAP3K19Q56UN5 1328 aa15.56■□□□□ 0.08
CSTF3-205ENST00000524775 RNF123Q5XPI4 1314 aa15.56■□□□□ 0.08
CSTF3-205ENST00000524775 MSH6P52701 1360 aa15.56■□□□□ 0.08
CSTF3-205ENST00000524775 CRYBG1Q9Y4K1 1723 aa15.56■□□□□ 0.08
CSTF3-205ENST00000524775 PPM1GO15355 546 aaPredicted RBP15.55■□□□□ 0.08
CSTF3-205ENST00000524775 ABTB2Q8N961 1025 aa15.55■□□□□ 0.08
CSTF3-205ENST00000524775 RSPH6AQ9H0K4 717 aa15.55■□□□□ 0.08
CSTF3-205ENST00000524775 SBNO1A3KN83 1393 aa15.54■□□□□ 0.08
CSTF3-205ENST00000524775 U2SURPO15042 1029 aaKnown RBP15.54■□□□□ 0.08
CSTF3-205ENST00000524775 FCHSD2O94868 740 aa15.54■□□□□ 0.08
CSTF3-205ENST00000524775 SLFN5Q08AF3 891 aa15.54■□□□□ 0.08
CSTF3-205ENST00000524775 KRT28Q7Z3Y7 464 aa15.54■□□□□ 0.08
CSTF3-205ENST00000524775 DMRT2Q9Y5R5 561 aa15.54■□□□□ 0.08
CSTF3-205ENST00000524775 PXDNQ92626 1479 aa15.53■□□□□ 0.08
CSTF3-205ENST00000524775 KIF24Q5T7B8 1368 aa15.53■□□□□ 0.08
CSTF3-205ENST00000524775 PAK3O75914 559 aaPredicted RBP15.53■□□□□ 0.08
CSTF3-205ENST00000524775 EIF4A2Q14240 407 aaKnown RBP15.53■□□□□ 0.08
CSTF3-205ENST00000524775 CCDC27Q2M243 656 aa15.53■□□□□ 0.08
CSTF3-205ENST00000524775 NUTM2GQ5VZR2 741 aa15.53■□□□□ 0.08
CSTF3-205ENST00000524775 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
CSTF3-205ENST00000524775 RGPD2P0DJD1 1756 aa15.52■□□□□ 0.08
CSTF3-205ENST00000524775 RGPD5Q99666 1765 aa15.52■□□□□ 0.08
CSTF3-205ENST00000524775 HSP90AB2PQ58FF8 381 aa15.52■□□□□ 0.08
CSTF3-205ENST00000524775 DUSP27Q5VZP5 1158 aa15.52■□□□□ 0.08
CSTF3-205ENST00000524775 WWC1Q8IX03 1113 aa15.52■□□□□ 0.08
CSTF3-205ENST00000524775 LTBP4Q8N2S1 1624 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms