RNA–Protein interactions for RNA: ENST00000524568.1

NDUFS3-202, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 733 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-202ENST00000524568 GJD4Q96KN9 370 aaPredicted RBP28.19■■■□□ 2.1
NDUFS3-202ENST00000524568 PHRF1Q9P1Y6 1649 aaKnown RBP28.17■■■□□ 2.1
NDUFS3-202ENST00000524568 CENPJQ9HC77 1338 aaPredicted RBP28.16■■■□□ 2.1
NDUFS3-202ENST00000524568 FAM83GA6ND36 823 aa28.15■■■□□ 2.1
NDUFS3-202ENST00000524568 PAK3O75914 559 aaPredicted RBP28.14■■■□□ 2.1
NDUFS3-202ENST00000524568 COL14A1Q05707 1796 aaKnown RBP28.14■■■□□ 2.09
NDUFS3-202ENST00000524568 POLR3AO14802 1390 aaPredicted RBP28.13■■■□□ 2.09
NDUFS3-202ENST00000524568 ACEP12821 1306 aa28.12■■■□□ 2.09
NDUFS3-202ENST00000524568 ATAD2Q6PL18 1390 aa28.11■■■□□ 2.09
NDUFS3-202ENST00000524568 NBPF8Q3BBV2 869 aa28.1■■■□□ 2.09
NDUFS3-202ENST00000524568 CABP2Q9NPB3 220 aa28.1■■■□□ 2.09
NDUFS3-202ENST00000524568 CCDC61Q9Y6R9 512 aa28.1■■■□□ 2.09
NDUFS3-202ENST00000524568 VPS72Q15906 364 aa28.08■■■□□ 2.09
NDUFS3-202ENST00000524568 NUTM2GQ5VZR2 741 aa28.08■■■□□ 2.09
NDUFS3-202ENST00000524568 PPIP5K1Q6PFW1 1433 aa28.08■■■□□ 2.09
NDUFS3-202ENST00000524568 PLEKHG3A1L390 1219 aa28.07■■■□□ 2.08
NDUFS3-202ENST00000524568 SRPK2P78362 688 aaKnown RBP28.07■■■□□ 2.08
NDUFS3-202ENST00000524568 ROCK2O75116 1388 aaKnown RBP28.06■■■□□ 2.08
NDUFS3-202ENST00000524568 NRKQ7Z2Y5 1582 aa28.04■■■□□ 2.08
NDUFS3-202ENST00000524568 BTG4Q9NY30 223 aa28.04■■■□□ 2.08
NDUFS3-202ENST00000524568 CCDC9Q9Y3X0 531 aaKnown RBP28.02■■■□□ 2.08
NDUFS3-202ENST00000524568 KIAA0232Q92628 1395 aa28.01■■■□□ 2.07
NDUFS3-202ENST00000524568 SEPT12Q8IYM1 358 aa28■■■□□ 2.07
NDUFS3-202ENST00000524568 CHRNA2Q15822 529 aa27.98■■■□□ 2.07
NDUFS3-202ENST00000524568 PRDM11Q9NQV5 511 aa27.98■■■□□ 2.07
NDUFS3-202ENST00000524568 CABP1Q9NZU7 370 aa27.97■■■□□ 2.07
NDUFS3-202ENST00000524568 AKAP12Q02952 1782 aa27.96■■■□□ 2.07
NDUFS3-202ENST00000524568 ZC3H6P61129 1189 aaKnown RBP27.96■■■□□ 2.07
NDUFS3-202ENST00000524568 PIK3C2AO00443 1686 aa27.95■■■□□ 2.07
NDUFS3-202ENST00000524568 ONECUT3O60422 494 aaPredicted RBP27.95■■■□□ 2.06
NDUFS3-202ENST00000524568 TRIM26Q12899 539 aaPredicted RBP27.95■■■□□ 2.06
NDUFS3-202ENST00000524568 USP6P35125 1406 aa27.94■■■□□ 2.06
NDUFS3-202ENST00000524568 ABTB2Q8N961 1025 aa27.94■■■□□ 2.06
NDUFS3-202ENST00000524568 LMO7Q8WWI1 1683 aa27.94■■■□□ 2.06
NDUFS3-202ENST00000524568 THSD7AQ9UPZ6 1657 aa27.94■■■□□ 2.06
NDUFS3-202ENST00000524568 USP19O94966 1318 aa27.93■■■□□ 2.06
NDUFS3-202ENST00000524568 FAM98CQ17RN3 349 aaKnown RBP27.93■■■□□ 2.06
NDUFS3-202ENST00000524568 EVC2Q86UK5 1308 aa27.92■■■□□ 2.06
NDUFS3-202ENST00000524568 TONSLQ96HA7 1378 aa27.91■■■□□ 2.06
NDUFS3-202ENST00000524568 SSH2Q76I76 1423 aa27.91■■■□□ 2.06
NDUFS3-202ENST00000524568 SPATA31A5Q5VU36 1347 aa27.91■■■□□ 2.06
NDUFS3-202ENST00000524568 SPATA31A7Q8IWB4 1347 aa27.91■■■□□ 2.06
NDUFS3-202ENST00000524568 CAMTA1Q9Y6Y1 1673 aa27.91■■■□□ 2.06
NDUFS3-202ENST00000524568 A0A0G2JS52 829 aa27.87■■■□□ 2.05
NDUFS3-202ENST00000524568 MYT1Q01538 1121 aa27.87■■■□□ 2.05
NDUFS3-202ENST00000524568 KRT27Q7Z3Y8 459 aa27.86■■■□□ 2.05
NDUFS3-202ENST00000524568 CARD11Q9BXL7 1154 aa27.86■■■□□ 2.05
NDUFS3-202ENST00000524568 STRN4Q9NRL3 753 aa27.86■■■□□ 2.05
NDUFS3-202ENST00000524568 SLIT3O75094 1523 aa27.86■■■□□ 2.05
NDUFS3-202ENST00000524568 MON2Q7Z3U7 1717 aa27.85■■■□□ 2.05
NDUFS3-202ENST00000524568 CPDO75976 1380 aa27.85■■■□□ 2.05
NDUFS3-202ENST00000524568 BLMP54132 1417 aaPredicted RBP27.84■■■□□ 2.05
NDUFS3-202ENST00000524568 SPATA31A1Q5TZJ5 1347 aa27.83■■■□□ 2.05
NDUFS3-202ENST00000524568 GCP02774 474 aa27.82■■■□□ 2.04
NDUFS3-202ENST00000524568 FAM182BQ5T319 152 aa27.82■■■□□ 2.04
NDUFS3-202ENST00000524568 NLRP13Q86W25 1043 aa27.82■■■□□ 2.04
NDUFS3-202ENST00000524568 BRD4O60885 1362 aaPredicted RBP27.82■■■□□ 2.04
NDUFS3-202ENST00000524568 SBNO2Q9Y2G9 1366 aa27.82■■■□□ 2.04
NDUFS3-202ENST00000524568 COL18A1P39060 1754 aa27.81■■■□□ 2.04
NDUFS3-202ENST00000524568 CPSF1Q10570 1443 aaKnown RBP27.81■■■□□ 2.04
NDUFS3-202ENST00000524568 DEFB132Q7Z7B7 95 aa27.8■■■□□ 2.04
NDUFS3-202ENST00000524568 CCDC125Q86Z20 511 aa27.8■■■□□ 2.04
NDUFS3-202ENST00000524568 RGPD5Q99666 1765 aa27.8■■■□□ 2.04
NDUFS3-202ENST00000524568 NLRP6P59044 892 aa27.79■■■□□ 2.04
NDUFS3-202ENST00000524568 CD163L1Q9NR16 1453 aa27.78■■■□□ 2.04
NDUFS3-202ENST00000524568 LARP1Q6PKG0 1096 aaKnown RBP27.78■■■□□ 2.04
NDUFS3-202ENST00000524568 COL5A2P05997 1499 aaPredicted RBP27.77■■■□□ 2.04
NDUFS3-202ENST00000524568 TTC21BQ7Z4L5 1316 aa27.77■■■□□ 2.04
NDUFS3-202ENST00000524568 USP35Q9P2H5 1018 aa27.77■■■□□ 2.04
NDUFS3-202ENST00000524568 SRCAPQ6ZRS2 3230 aa27.77■■■□□ 2.04
NDUFS3-202ENST00000524568 TNS1Q9HBL0 1735 aaKnown RBP27.76■■■□□ 2.03
NDUFS3-202ENST00000524568 ZBTB7CA1YPR0 619 aa27.75■■■□□ 2.03
NDUFS3-202ENST00000524568 RGPD1P0DJD0 1748 aa27.75■■■□□ 2.03
NDUFS3-202ENST00000524568 EVA1CP58658 441 aa27.73■■■□□ 2.03
NDUFS3-202ENST00000524568 KTN1Q86UP2 1357 aaKnown RBP27.73■■■□□ 2.03
NDUFS3-202ENST00000524568 NFAT5O94916 1531 aa27.72■■■□□ 2.03
NDUFS3-202ENST00000524568 ZRANB1Q9UGI0 708 aa27.71■■■□□ 2.03
NDUFS3-202ENST00000524568 WNK3Q9BYP7 1800 aa27.7■■■□□ 2.02
NDUFS3-202ENST00000524568 ZNF692Q9BU19 519 aaPredicted RBP27.7■■■□□ 2.02
NDUFS3-202ENST00000524568 USP54Q70EL1 1684 aa27.7■■■□□ 2.02
NDUFS3-202ENST00000524568 SOX12O15370 315 aa27.69■■■□□ 2.02
NDUFS3-202ENST00000524568 AATKQ6ZMQ8 1374 aa27.69■■■□□ 2.02
NDUFS3-202ENST00000524568 PARP4Q9UKK3 1724 aaKnown RBP27.69■■■□□ 2.02
NDUFS3-202ENST00000524568 TESK2Q96S53 571 aa27.67■■■□□ 2.02
NDUFS3-202ENST00000524568 SLC12A5Q9H2X9 1139 aa27.67■■■□□ 2.02
NDUFS3-202ENST00000524568 AXIN2Q9Y2T1 843 aa27.67■■■□□ 2.02
NDUFS3-202ENST00000524568 TTC21AQ8NDW8 1320 aa27.67■■■□□ 2.02
NDUFS3-202ENST00000524568 BARGINQ6ZT62 677 aa27.66■■■□□ 2.02
NDUFS3-202ENST00000524568 ST20-MTHFSA0A0A6YYL1 179 aa27.65■■■□□ 2.02
NDUFS3-202ENST00000524568 SF3B2Q13435 895 aaKnown RBP27.65■■■□□ 2.02
NDUFS3-202ENST00000524568 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.65■■■□□ 2.02
NDUFS3-202ENST00000524568 TCP11L2Q8N4U5 519 aa27.65■■■□□ 2.02
NDUFS3-202ENST00000524568 TMC1Q8TDI8 760 aa27.65■■■□□ 2.02
NDUFS3-202ENST00000524568 CRB1P82279 1406 aa27.65■■■□□ 2.02
NDUFS3-202ENST00000524568 LRRC37A3O60309 1634 aa27.64■■■□□ 2.02
NDUFS3-202ENST00000524568 LTN1O94822 1766 aa27.64■■■□□ 2.02
NDUFS3-202ENST00000524568 ARHGEF25Q86VW2 580 aa27.63■■■□□ 2.01
NDUFS3-202ENST00000524568 NME9Q86XW9 330 aa27.63■■■□□ 2.01
NDUFS3-202ENST00000524568 A0A1W2PP64 1363 aa27.62■■■□□ 2.01
NDUFS3-202ENST00000524568 PEAK1Q9H792 1746 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms