RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 CABLES1Q8TDN4 633 aa27.28■■□□□ 1.96
FBXO28-205ENST00000523990 CARD11Q9BXL7 1154 aa27.28■■□□□ 1.96
FBXO28-205ENST00000523990 QTRT2Q9H974 415 aaKnown RBP27.27■■□□□ 1.96
FBXO28-205ENST00000523990 SBNO2Q9Y2G9 1366 aa27.27■■□□□ 1.96
FBXO28-205ENST00000523990 ATRNO75882 1429 aa27.27■■□□□ 1.96
FBXO28-205ENST00000523990 EVC2Q86UK5 1308 aa27.26■■□□□ 1.95
FBXO28-205ENST00000523990 AKAP12Q02952 1782 aa27.26■■□□□ 1.95
FBXO28-205ENST00000523990 CLSPNQ9HAW4 1339 aa27.24■■□□□ 1.95
FBXO28-205ENST00000523990 PAK3O75914 559 aaPredicted RBP27.24■■□□□ 1.95
FBXO28-205ENST00000523990 HAP1P54257 671 aaPredicted RBP27.24■■□□□ 1.95
FBXO28-205ENST00000523990 RBM6P78332 1123 aaKnown RBP27.24■■□□□ 1.95
FBXO28-205ENST00000523990 RGS12O14924 1447 aa27.23■■□□□ 1.95
FBXO28-205ENST00000523990 NRAPQ86VF7 1730 aa27.23■■□□□ 1.95
FBXO28-205ENST00000523990 PLEKHG5O94827 1062 aa27.23■■□□□ 1.95
FBXO28-205ENST00000523990 COL14A1Q05707 1796 aaKnown RBP27.22■■□□□ 1.95
FBXO28-205ENST00000523990 TRPC5Q9UL62 973 aaPredicted RBP27.22■■□□□ 1.95
FBXO28-205ENST00000523990 EP400Q96L91 3159 aa27.2■■□□□ 1.94
FBXO28-205ENST00000523990 GLI3P10071 1580 aa27.18■■□□□ 1.94
FBXO28-205ENST00000523990 NRKQ7Z2Y5 1582 aa27.18■■□□□ 1.94
FBXO28-205ENST00000523990 USP6P35125 1406 aa27.17■■□□□ 1.94
FBXO28-205ENST00000523990 CABP1Q9NZU7 370 aa27.16■■□□□ 1.94
FBXO28-205ENST00000523990 MON2Q7Z3U7 1717 aa27.16■■□□□ 1.94
FBXO28-205ENST00000523990 UNC5CLQ8IV45 518 aa27.16■■□□□ 1.94
FBXO28-205ENST00000523990 BRD4O60885 1362 aaPredicted RBP27.15■■□□□ 1.94
FBXO28-205ENST00000523990 ATAD2Q6PL18 1390 aa27.15■■□□□ 1.94
FBXO28-205ENST00000523990 PIK3C2AO00443 1686 aa27.15■■□□□ 1.94
FBXO28-205ENST00000523990 SSH2Q76I76 1423 aa27.11■■□□□ 1.93
FBXO28-205ENST00000523990 FAM83GA6ND36 823 aa27.11■■□□□ 1.93
FBXO28-205ENST00000523990 TIMELESSQ9UNS1 1208 aa27.11■■□□□ 1.93
FBXO28-205ENST00000523990 NUTM2GQ5VZR2 741 aa27.09■■□□□ 1.93
FBXO28-205ENST00000523990 ABTB2Q8N961 1025 aa27.09■■□□□ 1.93
FBXO28-205ENST00000523990 GJD4Q96KN9 370 aaPredicted RBP27.09■■□□□ 1.93
FBXO28-205ENST00000523990 CPSF1Q10570 1443 aaKnown RBP27.08■■□□□ 1.93
FBXO28-205ENST00000523990 USP19O94966 1318 aa27.08■■□□□ 1.93
FBXO28-205ENST00000523990 BRWD3Q6RI45 1802 aa27.07■■□□□ 1.92
FBXO28-205ENST00000523990 KIAA0232Q92628 1395 aa27.06■■□□□ 1.92
FBXO28-205ENST00000523990 SLIT3O75094 1523 aa27.06■■□□□ 1.92
FBXO28-205ENST00000523990 LMO7Q8WWI1 1683 aa27.05■■□□□ 1.92
FBXO28-205ENST00000523990 ST20-MTHFSA0A0A6YYL1 179 aa27.05■■□□□ 1.92
FBXO28-205ENST00000523990 VPS72Q15906 364 aa27.05■■□□□ 1.92
FBXO28-205ENST00000523990 TESK2Q96S53 571 aa27.05■■□□□ 1.92
FBXO28-205ENST00000523990 USP47Q96K76 1375 aa27.05■■□□□ 1.92
FBXO28-205ENST00000523990 CD163L1Q9NR16 1453 aa27.05■■□□□ 1.92
FBXO28-205ENST00000523990 BTG4Q9NY30 223 aa27.04■■□□□ 1.92
FBXO28-205ENST00000523990 USP54Q70EL1 1684 aa27.03■■□□□ 1.92
FBXO28-205ENST00000523990 PRDM11Q9NQV5 511 aa27.03■■□□□ 1.92
FBXO28-205ENST00000523990 CCER1Q8TC90 406 aaPredicted RBP27.02■■□□□ 1.92
FBXO28-205ENST00000523990 ZNF692Q9BU19 519 aaPredicted RBP27.02■■□□□ 1.92
FBXO28-205ENST00000523990 NLRP13Q86W25 1043 aa27.01■■□□□ 1.91
FBXO28-205ENST00000523990 CPDO75976 1380 aa27.01■■□□□ 1.91
FBXO28-205ENST00000523990 KTN1Q86UP2 1357 aaKnown RBP27.01■■□□□ 1.91
FBXO28-205ENST00000523990 UPF1Q92900 1129 aaKnown RBP eCLIP26.99■■□□□ 1.91
FBXO28-205ENST00000523990 TTC21BQ7Z4L5 1316 aa26.99■■□□□ 1.91
FBXO28-205ENST00000523990 ZC3H6P61129 1189 aaKnown RBP26.99■■□□□ 1.91
FBXO28-205ENST00000523990 PUS7Q96PZ0 661 aaKnown RBP26.99■■□□□ 1.91
FBXO28-205ENST00000523990 CHRNA2Q15822 529 aa26.97■■□□□ 1.91
FBXO28-205ENST00000523990 TTC21AQ8NDW8 1320 aa26.97■■□□□ 1.91
FBXO28-205ENST00000523990 GCP02774 474 aa26.96■■□□□ 1.91
FBXO28-205ENST00000523990 NLRP6P59044 892 aa26.96■■□□□ 1.91
FBXO28-205ENST00000523990 CCDC9Q9Y3X0 531 aaKnown RBP26.96■■□□□ 1.91
FBXO28-205ENST00000523990 CAMTA1Q9Y6Y1 1673 aa26.96■■□□□ 1.91
FBXO28-205ENST00000523990 COL18A1P39060 1754 aa26.94■■□□□ 1.9
FBXO28-205ENST00000523990 SLC24A1O60721 1099 aa26.94■■□□□ 1.9
FBXO28-205ENST00000523990 TMC1Q8TDI8 760 aa26.94■■□□□ 1.9
FBXO28-205ENST00000523990 THSD7AQ9UPZ6 1657 aa26.94■■□□□ 1.9
FBXO28-205ENST00000523990 SLC12A5Q9H2X9 1139 aa26.93■■□□□ 1.9
FBXO28-205ENST00000523990 A0A1W2PP64 1363 aa26.93■■□□□ 1.9
FBXO28-205ENST00000523990 NINLQ9Y2I6 1382 aa26.93■■□□□ 1.9
FBXO28-205ENST00000523990 NFAT5O94916 1531 aa26.92■■□□□ 1.9
FBXO28-205ENST00000523990 EDC4Q6P2E9 1401 aaKnown RBP26.91■■□□□ 1.9
FBXO28-205ENST00000523990 SPATA31A5Q5VU36 1347 aa26.91■■□□□ 1.9
FBXO28-205ENST00000523990 SPATA31A7Q8IWB4 1347 aa26.91■■□□□ 1.9
FBXO28-205ENST00000523990 ONECUT3O60422 494 aaPredicted RBP26.9■■□□□ 1.9
FBXO28-205ENST00000523990 RGPD5Q99666 1765 aa26.9■■□□□ 1.9
FBXO28-205ENST00000523990 MYOM1P52179 1685 aa26.9■■□□□ 1.9
FBXO28-205ENST00000523990 HDGFL2Q7Z4V5 671 aaPredicted RBP26.89■■□□□ 1.89
FBXO28-205ENST00000523990 COL5A2P05997 1499 aaPredicted RBP26.88■■□□□ 1.89
FBXO28-205ENST00000523990 TMF1P82094 1093 aa26.88■■□□□ 1.89
FBXO28-205ENST00000523990 SEPT12Q8IYM1 358 aa26.88■■□□□ 1.89
FBXO28-205ENST00000523990 LTN1O94822 1766 aa26.88■■□□□ 1.89
FBXO28-205ENST00000523990 TERF2IPQ9NYB0 399 aa26.87■■□□□ 1.89
FBXO28-205ENST00000523990 USP31Q70CQ4 1352 aa26.86■■□□□ 1.89
FBXO28-205ENST00000523990 FAM98CQ17RN3 349 aaKnown RBP26.86■■□□□ 1.89
FBXO28-205ENST00000523990 STRN4Q9NRL3 753 aa26.86■■□□□ 1.89
FBXO28-205ENST00000523990 SPATA31A1Q5TZJ5 1347 aa26.85■■□□□ 1.89
FBXO28-205ENST00000523990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.85■■□□□ 1.89
FBXO28-205ENST00000523990 AATKQ6ZMQ8 1374 aa26.85■■□□□ 1.89
FBXO28-205ENST00000523990 ABCC6O95255 1503 aa26.83■■□□□ 1.89
FBXO28-205ENST00000523990 WNK3Q9BYP7 1800 aa26.83■■□□□ 1.89
FBXO28-205ENST00000523990 KCNH5Q8NCM2 988 aa26.82■■□□□ 1.88
FBXO28-205ENST00000523990 ANKRD36BQ8N2N9 1353 aa26.82■■□□□ 1.88
FBXO28-205ENST00000523990 NME9Q86XW9 330 aa26.82■■□□□ 1.88
FBXO28-205ENST00000523990 OVOS2A0A0J9YW53 1432 aa26.81■■□□□ 1.88
FBXO28-205ENST00000523990 OVOS2Q6IE36 1432 aa26.81■■□□□ 1.88
FBXO28-205ENST00000523990 ZRANB1Q9UGI0 708 aa26.81■■□□□ 1.88
FBXO28-205ENST00000523990 ZBTB7CA1YPR0 619 aa26.8■■□□□ 1.88
FBXO28-205ENST00000523990 EVA1CP58658 441 aa26.8■■□□□ 1.88
FBXO28-205ENST00000523990 ARHGEF25Q86VW2 580 aa26.8■■□□□ 1.88
FBXO28-205ENST00000523990 KIF20BQ96Q89 1820 aa26.79■■□□□ 1.88
FBXO28-205ENST00000523990 PARP4Q9UKK3 1724 aaKnown RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms