RNA–Protein interactions for RNA: ENST00000523720.1

R3HCC1-209, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-209ENST00000523720 RALGAPBQ86X10 1494 aa16.93■□□□□ 0.3
R3HCC1-209ENST00000523720 PPIP5K1Q6PFW1 1433 aa16.92■□□□□ 0.3
R3HCC1-209ENST00000523720 NRKQ7Z2Y5 1582 aa16.91■□□□□ 0.3
R3HCC1-209ENST00000523720 PLEKHG5O94827 1062 aa16.91■□□□□ 0.3
R3HCC1-209ENST00000523720 SRPK2P78362 688 aaKnown RBP16.91■□□□□ 0.3
R3HCC1-209ENST00000523720 CABLES1Q8TDN4 633 aa16.91■□□□□ 0.3
R3HCC1-209ENST00000523720 CCDC61Q9Y6R9 512 aa16.91■□□□□ 0.3
R3HCC1-209ENST00000523720 AKAP12Q02952 1782 aa16.91■□□□□ 0.3
R3HCC1-209ENST00000523720 ATAD2Q6PL18 1390 aa16.9■□□□□ 0.3
R3HCC1-209ENST00000523720 PAK3O75914 559 aaPredicted RBP16.9■□□□□ 0.3
R3HCC1-209ENST00000523720 UNC5CLQ8IV45 518 aa16.9■□□□□ 0.3
R3HCC1-209ENST00000523720 BRWD3Q6RI45 1802 aa16.9■□□□□ 0.3
R3HCC1-209ENST00000523720 ACEP12821 1306 aa16.88■□□□□ 0.29
R3HCC1-209ENST00000523720 UPF1Q92900 1129 aaKnown RBP eCLIP16.87■□□□□ 0.29
R3HCC1-209ENST00000523720 GJD4Q96KN9 370 aaPredicted RBP16.87■□□□□ 0.29
R3HCC1-209ENST00000523720 PLEKHG3A1L390 1219 aa16.86■□□□□ 0.29
R3HCC1-209ENST00000523720 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
R3HCC1-209ENST00000523720 BRD4O60885 1362 aaPredicted RBP16.86■□□□□ 0.29
R3HCC1-209ENST00000523720 MON2Q7Z3U7 1717 aa16.85■□□□□ 0.29
R3HCC1-209ENST00000523720 CABP2Q9NPB3 220 aa16.85■□□□□ 0.29
R3HCC1-209ENST00000523720 SBNO2Q9Y2G9 1366 aa16.85■□□□□ 0.29
R3HCC1-209ENST00000523720 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
R3HCC1-209ENST00000523720 USP6P35125 1406 aa16.84■□□□□ 0.29
R3HCC1-209ENST00000523720 VPS72Q15906 364 aa16.83■□□□□ 0.28
R3HCC1-209ENST00000523720 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.28
R3HCC1-209ENST00000523720 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
R3HCC1-209ENST00000523720 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
R3HCC1-209ENST00000523720 FAM83GA6ND36 823 aa16.81■□□□□ 0.28
R3HCC1-209ENST00000523720 CARD11Q9BXL7 1154 aa16.81■□□□□ 0.28
R3HCC1-209ENST00000523720 PRDM11Q9NQV5 511 aa16.81■□□□□ 0.28
R3HCC1-209ENST00000523720 THSD7AQ9UPZ6 1657 aa16.81■□□□□ 0.28
R3HCC1-209ENST00000523720 KIAA0232Q92628 1395 aa16.8■□□□□ 0.28
R3HCC1-209ENST00000523720 BTG4Q9NY30 223 aa16.8■□□□□ 0.28
R3HCC1-209ENST00000523720 SLIT3O75094 1523 aa16.8■□□□□ 0.28
R3HCC1-209ENST00000523720 USP19O94966 1318 aa16.79■□□□□ 0.28
R3HCC1-209ENST00000523720 ABTB2Q8N961 1025 aa16.79■□□□□ 0.28
R3HCC1-209ENST00000523720 USP54Q70EL1 1684 aa16.78■□□□□ 0.28
R3HCC1-209ENST00000523720 NUTM2GQ5VZR2 741 aa16.78■□□□□ 0.28
R3HCC1-209ENST00000523720 CABP1Q9NZU7 370 aa16.77■□□□□ 0.28
R3HCC1-209ENST00000523720 CPDO75976 1380 aa16.77■□□□□ 0.27
R3HCC1-209ENST00000523720 NLRP13Q86W25 1043 aa16.75■□□□□ 0.27
R3HCC1-209ENST00000523720 SSH2Q76I76 1423 aa16.75■□□□□ 0.27
R3HCC1-209ENST00000523720 RGPD1P0DJD0 1748 aa16.75■□□□□ 0.27
R3HCC1-209ENST00000523720 WNK3Q9BYP7 1800 aa16.75■□□□□ 0.27
R3HCC1-209ENST00000523720 A0A0G2JS52 829 aa16.74■□□□□ 0.27
R3HCC1-209ENST00000523720 MYT1Q01538 1121 aa16.74■□□□□ 0.27
R3HCC1-209ENST00000523720 SEPT12Q8IYM1 358 aa16.74■□□□□ 0.27
R3HCC1-209ENST00000523720 SPATA31A5Q5VU36 1347 aa16.73■□□□□ 0.27
R3HCC1-209ENST00000523720 SPATA31A7Q8IWB4 1347 aa16.73■□□□□ 0.27
R3HCC1-209ENST00000523720 ZC3H6P61129 1189 aaKnown RBP16.73■□□□□ 0.27
R3HCC1-209ENST00000523720 PCGF6Q9BYE7 350 aa16.73■□□□□ 0.27
R3HCC1-209ENST00000523720 EP400Q96L91 3159 aa16.73■□□□□ 0.27
R3HCC1-209ENST00000523720 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
R3HCC1-209ENST00000523720 BLMP54132 1417 aaPredicted RBP16.72■□□□□ 0.27
R3HCC1-209ENST00000523720 CPSF1Q10570 1443 aaKnown RBP16.72■□□□□ 0.27
R3HCC1-209ENST00000523720 CHRNA2Q15822 529 aa16.72■□□□□ 0.27
R3HCC1-209ENST00000523720 KTN1Q86UP2 1357 aaKnown RBP16.72■□□□□ 0.27
R3HCC1-209ENST00000523720 ABCC6O95255 1503 aa16.71■□□□□ 0.27
R3HCC1-209ENST00000523720 ONECUT3O60422 494 aaPredicted RBP16.71■□□□□ 0.27
R3HCC1-209ENST00000523720 FAM98CQ17RN3 349 aaKnown RBP16.71■□□□□ 0.27
R3HCC1-209ENST00000523720 CCDC125Q86Z20 511 aa16.71■□□□□ 0.27
R3HCC1-209ENST00000523720 ZNF692Q9BU19 519 aaPredicted RBP16.71■□□□□ 0.27
R3HCC1-209ENST00000523720 COL5A2P05997 1499 aaPredicted RBP16.71■□□□□ 0.27
R3HCC1-209ENST00000523720 TTC21AQ8NDW8 1320 aa16.7■□□□□ 0.26
R3HCC1-209ENST00000523720 PARP4Q9UKK3 1724 aaKnown RBP16.7■□□□□ 0.26
R3HCC1-209ENST00000523720 LTN1O94822 1766 aa16.7■□□□□ 0.26
R3HCC1-209ENST00000523720 COL18A1P39060 1754 aa16.7■□□□□ 0.26
R3HCC1-209ENST00000523720 CLSPNQ9HAW4 1339 aa16.7■□□□□ 0.26
R3HCC1-209ENST00000523720 RGPD5Q99666 1765 aa16.69■□□□□ 0.26
R3HCC1-209ENST00000523720 NINLQ9Y2I6 1382 aa16.69■□□□□ 0.26
R3HCC1-209ENST00000523720 GCP02774 474 aa16.69■□□□□ 0.26
R3HCC1-209ENST00000523720 NLRP6P59044 892 aa16.69■□□□□ 0.26
R3HCC1-209ENST00000523720 KRT27Q7Z3Y8 459 aa16.69■□□□□ 0.26
R3HCC1-209ENST00000523720 STRN4Q9NRL3 753 aa16.69■□□□□ 0.26
R3HCC1-209ENST00000523720 TNS1Q9HBL0 1735 aaKnown RBP16.69■□□□□ 0.26
R3HCC1-209ENST00000523720 NFAT5O94916 1531 aa16.69■□□□□ 0.26
R3HCC1-209ENST00000523720 SPATA31A1Q5TZJ5 1347 aa16.69■□□□□ 0.26
R3HCC1-209ENST00000523720 CD163L1Q9NR16 1453 aa16.68■□□□□ 0.26
R3HCC1-209ENST00000523720 TTC21BQ7Z4L5 1316 aa16.68■□□□□ 0.26
R3HCC1-209ENST00000523720 LRRC37A3O60309 1634 aa16.67■□□□□ 0.26
R3HCC1-209ENST00000523720 USP47Q96K76 1375 aa16.66■□□□□ 0.26
R3HCC1-209ENST00000523720 EVA1CP58658 441 aa16.66■□□□□ 0.26
R3HCC1-209ENST00000523720 EDC4Q6P2E9 1401 aaKnown RBP16.66■□□□□ 0.26
R3HCC1-209ENST00000523720 AATKQ6ZMQ8 1374 aa16.65■□□□□ 0.26
R3HCC1-209ENST00000523720 CRB1P82279 1406 aa16.65■□□□□ 0.26
R3HCC1-209ENST00000523720 SLC24A1O60721 1099 aa16.65■□□□□ 0.26
R3HCC1-209ENST00000523720 SF3B2Q13435 895 aaKnown RBP16.65■□□□□ 0.26
R3HCC1-209ENST00000523720 HDGFL2Q7Z4V5 671 aaPredicted RBP16.65■□□□□ 0.26
R3HCC1-209ENST00000523720 KCNH5Q8NCM2 988 aa16.65■□□□□ 0.26
R3HCC1-209ENST00000523720 PUS7Q96PZ0 661 aaKnown RBP16.65■□□□□ 0.26
R3HCC1-209ENST00000523720 ZBTB7CA1YPR0 619 aa16.64■□□□□ 0.25
R3HCC1-209ENST00000523720 TMC1Q8TDI8 760 aa16.64■□□□□ 0.25
R3HCC1-209ENST00000523720 A0A1W2PP64 1363 aa16.64■□□□□ 0.25
R3HCC1-209ENST00000523720 TERF2IPQ9NYB0 399 aa16.63■□□□□ 0.25
R3HCC1-209ENST00000523720 KIF20BQ96Q89 1820 aa16.63■□□□□ 0.25
R3HCC1-209ENST00000523720 ST20-MTHFSA0A0A6YYL1 179 aa16.62■□□□□ 0.25
R3HCC1-209ENST00000523720 LARP1Q6PKG0 1096 aaKnown RBP16.62■□□□□ 0.25
R3HCC1-209ENST00000523720 BARGINQ6ZT62 677 aa16.62■□□□□ 0.25
R3HCC1-209ENST00000523720 TESK2Q96S53 571 aa16.62■□□□□ 0.25
R3HCC1-209ENST00000523720 USP35Q9P2H5 1018 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms