RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 COG6Q9Y2V7 657 aa12.16□□□□□ -0.46
CPNE3-206ENST00000523469 ZC3H4Q9UPT8 1303 aaKnown RBP12.15□□□□□ -0.46
CPNE3-206ENST00000523469 NBPF14Q5TI25 921 aa12.15□□□□□ -0.46
CPNE3-206ENST00000523469 TRIM32Q13049 653 aa12.14□□□□□ -0.47
CPNE3-206ENST00000523469 LIAT1Q6ZQX7 453 aa12.14□□□□□ -0.47
CPNE3-206ENST00000523469 GPKOWQ92917 476 aaPredicted RBP eCLIP12.14□□□□□ -0.47
CPNE3-206ENST00000523469 POM121Q96HA1 1249 aa12.14□□□□□ -0.47
CPNE3-206ENST00000523469 SLC19A1P41440 591 aa12.13□□□□□ -0.47
CPNE3-206ENST00000523469 CD2BP2O95400 341 aaKnown RBP12.12□□□□□ -0.47
CPNE3-206ENST00000523469 BAP1Q92560 729 aa12.12□□□□□ -0.47
CPNE3-206ENST00000523469 EMID1Q96A84 441 aaPredicted RBP12.12□□□□□ -0.47
CPNE3-206ENST00000523469 CLUAP1Q96AJ1 413 aa12.11□□□□□ -0.47
CPNE3-206ENST00000523469 A6NJR5 290 aa12.1□□□□□ -0.47
CPNE3-206ENST00000523469 GPR37L1O60883 481 aa12.1□□□□□ -0.47
CPNE3-206ENST00000523469 ABL2P42684 1182 aa12.1□□□□□ -0.47
CPNE3-206ENST00000523469 ZNF511Q8NB15 262 aa12.1□□□□□ -0.47
CPNE3-206ENST00000523469 WNT7BP56706 349 aa12.09□□□□□ -0.47
CPNE3-206ENST00000523469 PDXDC2PQ6P474 469 aa12.09□□□□□ -0.47
CPNE3-206ENST00000523469 PRKD2Q9BZL6 878 aa12.09□□□□□ -0.47
CPNE3-206ENST00000523469 ZMYND15Q9H091 742 aa12.09□□□□□ -0.47
CPNE3-206ENST00000523469 V9GY48 417 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-206ENST00000523469 LINC01559Q495D7 138 aa12.08□□□□□ -0.48
CPNE3-206ENST00000523469 WWC1Q8IX03 1113 aa12.08□□□□□ -0.48
CPNE3-206ENST00000523469 GPSM3Q9Y4H4 160 aa12.08□□□□□ -0.48
CPNE3-206ENST00000523469 RGS20O76081 388 aa12.07□□□□□ -0.48
CPNE3-206ENST00000523469 SH3BP2P78314 561 aa12.07□□□□□ -0.48
CPNE3-206ENST00000523469 SPRYD7Q5W111 196 aa12.07□□□□□ -0.48
CPNE3-206ENST00000523469 PTK2Q05397 1052 aa12.06□□□□□ -0.48
CPNE3-206ENST00000523469 IRF5Q13568 498 aa12.06□□□□□ -0.48
CPNE3-206ENST00000523469 TIMELESSQ9UNS1 1208 aa12.06□□□□□ -0.48
CPNE3-206ENST00000523469 SH3BP5LQ7L8J4 393 aa12.05□□□□□ -0.48
CPNE3-206ENST00000523469 BPHLQ86WA6 291 aaPredicted RBP12.05□□□□□ -0.48
CPNE3-206ENST00000523469 PROSER2Q86WR7 435 aaPredicted RBP12.05□□□□□ -0.48
CPNE3-206ENST00000523469 ZBBXA8MT70 800 aa12.04□□□□□ -0.48
CPNE3-206ENST00000523469 SKOR1P84550 965 aa12.04□□□□□ -0.48
CPNE3-206ENST00000523469 WASHC4Q2M389 1173 aa12.04□□□□□ -0.48
CPNE3-206ENST00000523469 ZNF598Q86UK7 904 aaKnown RBP12.04□□□□□ -0.48
CPNE3-206ENST00000523469 AGERQ15109 404 aa12.03□□□□□ -0.48
CPNE3-206ENST00000523469 SH3RF1Q7Z6J0 888 aa12.03□□□□□ -0.48
CPNE3-206ENST00000523469 FNBP4Q8N3X1 1017 aaPredicted RBP12.03□□□□□ -0.48
CPNE3-206ENST00000523469 ARHGAP9Q9BRR9 750 aa12.03□□□□□ -0.48
CPNE3-206ENST00000523469 NR1H3Q13133 447 aa12.02□□□□□ -0.49
CPNE3-206ENST00000523469 FOXJ1Q92949 421 aa12.02□□□□□ -0.49
CPNE3-206ENST00000523469 FBXO45P0C2W1 286 aa12.01□□□□□ -0.49
CPNE3-206ENST00000523469 ZNF697Q5TEC3 545 aa12.01□□□□□ -0.49
CPNE3-206ENST00000523469 RC3H1Q5TC82 1133 aaKnown RBP12□□□□□ -0.49
CPNE3-206ENST00000523469 MAGEB6P1A0A0J9YX57 407 aa11.99□□□□□ -0.49
CPNE3-206ENST00000523469 VARSP26640 1264 aaKnown RBP11.99□□□□□ -0.49
CPNE3-206ENST00000523469 ZBTB33Q86T24 672 aa11.99□□□□□ -0.49
CPNE3-206ENST00000523469 OCSTAMPQ9BR26 566 aa11.99□□□□□ -0.49
CPNE3-206ENST00000523469 WNT7AO00755 349 aa11.98□□□□□ -0.49
CPNE3-206ENST00000523469 TRAK2O60296 914 aa11.98□□□□□ -0.49
CPNE3-206ENST00000523469 C4orf48Q5BLP8 95 aa11.98□□□□□ -0.49
CPNE3-206ENST00000523469 EHBP1Q8NDI1 1231 aa11.98□□□□□ -0.49
CPNE3-206ENST00000523469 ZNF330Q9Y3S2 320 aaPredicted RBP11.98□□□□□ -0.49
CPNE3-206ENST00000523469 VAC14Q08AM6 782 aa11.97□□□□□ -0.49
CPNE3-206ENST00000523469 ADAM32Q8TC27 787 aa11.97□□□□□ -0.49
CPNE3-206ENST00000523469 CARD14Q9BXL6 1004 aa11.97□□□□□ -0.49
CPNE3-206ENST00000523469 C1QTNF2Q9BXJ5 285 aa11.96□□□□□ -0.49
CPNE3-206ENST00000523469 ERFEQ4G0M1 354 aa11.95□□□□□ -0.5
CPNE3-206ENST00000523469 FAM174AQ8TBP5 190 aa11.95□□□□□ -0.5
CPNE3-206ENST00000523469 ZNF592Q92610 1267 aa11.95□□□□□ -0.5
CPNE3-206ENST00000523469 EIF4G2P78344 907 aaKnown RBP eCLIP11.94□□□□□ -0.5
CPNE3-206ENST00000523469 TRMT44Q8IYL2 757 aaKnown RBP11.94□□□□□ -0.5
CPNE3-206ENST00000523469 SOX11P35716 441 aa11.93□□□□□ -0.5
CPNE3-206ENST00000523469 MCCD1P59942 119 aaPredicted RBP11.93□□□□□ -0.5
CPNE3-206ENST00000523469 FOXC1Q12948 553 aa11.93□□□□□ -0.5
CPNE3-206ENST00000523469 MRGPRX2Q96LB1 330 aa11.93□□□□□ -0.5
CPNE3-206ENST00000523469 PKD2L1Q9P0L9 805 aa11.93□□□□□ -0.5
CPNE3-206ENST00000523469 SIAH2O43255 324 aa11.91□□□□□ -0.5
CPNE3-206ENST00000523469 DZIP3Q86Y13 1208 aaKnown RBP11.91□□□□□ -0.5
CPNE3-206ENST00000523469 SLC10A4Q96EP9 437 aa11.91□□□□□ -0.5
CPNE3-206ENST00000523469 POM121CA8CG34 1229 aa11.9□□□□□ -0.5
CPNE3-206ENST00000523469 GDF9O60383 454 aa11.9□□□□□ -0.5
CPNE3-206ENST00000523469 MPNDQ8N594 471 aa11.9□□□□□ -0.5
CPNE3-206ENST00000523469 CDV3Q9UKY7 258 aaKnown RBP11.9□□□□□ -0.5
CPNE3-206ENST00000523469 PCDHB9Q9Y5E1 797 aa11.9□□□□□ -0.5
CPNE3-206ENST00000523469 PRR20EP86478 221 aa11.89□□□□□ -0.51
CPNE3-206ENST00000523469 PRR20CP86479 221 aa11.89□□□□□ -0.51
CPNE3-206ENST00000523469 PRR20DP86480 221 aa11.89□□□□□ -0.51
CPNE3-206ENST00000523469 PRR20BP86481 221 aa11.89□□□□□ -0.51
CPNE3-206ENST00000523469 PRR20AP86496 221 aa11.89□□□□□ -0.51
CPNE3-206ENST00000523469 SEMA3FQ13275 785 aa11.88□□□□□ -0.51
CPNE3-206ENST00000523469 ZNF777Q9ULD5 760 aaPredicted RBP11.88□□□□□ -0.51
CPNE3-206ENST00000523469 MAP4K5Q9Y4K4 846 aa11.88□□□□□ -0.51
CPNE3-206ENST00000523469 TRIM67Q6ZTA4 783 aa11.87□□□□□ -0.51
CPNE3-206ENST00000523469 CDK15Q96Q40 435 aa11.87□□□□□ -0.51
CPNE3-206ENST00000523469 ALG2Q9H553 416 aa11.87□□□□□ -0.51
CPNE3-206ENST00000523469 NBPF20Q3BBV1 942 aa11.86□□□□□ -0.51
CPNE3-206ENST00000523469 SNIP1Q8TAD8 396 aaKnown RBP11.86□□□□□ -0.51
CPNE3-206ENST00000523469 TNFRSF10AO00220 468 aa11.85□□□□□ -0.51
CPNE3-206ENST00000523469 ARID5BQ14865 1188 aa11.85□□□□□ -0.51
CPNE3-206ENST00000523469 VASH1Q7L8A9 365 aaPredicted RBP11.85□□□□□ -0.51
CPNE3-206ENST00000523469 TLL2Q9Y6L7 1015 aa11.85□□□□□ -0.51
CPNE3-206ENST00000523469 HDGFL1Q5TGJ6 251 aa11.84□□□□□ -0.51
CPNE3-206ENST00000523469 CYP4X1Q8N118 509 aa11.84□□□□□ -0.51
CPNE3-206ENST00000523469 TTC24A2A3L6 582 aaPredicted RBP11.83□□□□□ -0.52
CPNE3-206ENST00000523469 ADAMTS19Q8TE59 1207 aa11.83□□□□□ -0.52
CPNE3-206ENST00000523469 GLMNQ92990 594 aa11.83□□□□□ -0.52
CPNE3-206ENST00000523469 TOR4AQ9NXH8 423 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms