RNA–Protein interactions for RNA: ENST00000523464.1

EBF1-210, Transcript of early B cell factor 1, human

TSL 3

Gene EBF1, Length 766 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EBF1-210	ENST00000523464	TRAK1	Q9UPV9	953 aa		13.78	□□□□□ -0.2
EBF1-210	ENST00000523464	RAB3GAP2	Q9H2M9	1393 aa		13.78	□□□□□ -0.2
EBF1-210	ENST00000523464	COL14A1	Q05707	1796 aa	Known RBP	13.78	□□□□□ -0.2
EBF1-210	ENST00000523464	NGDN	Q8NEJ9	315 aa	Known RBP	13.77	□□□□□ -0.21
EBF1-210	ENST00000523464	DCAF11	Q8TEB1	546 aa		13.77	□□□□□ -0.21
EBF1-210	ENST00000523464	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.77	□□□□□ -0.21
EBF1-210	ENST00000523464	ALS2	Q96Q42	1657 aa		13.76	□□□□□ -0.21
EBF1-210	ENST00000523464	SPATA31A5	Q5VU36	1347 aa		13.76	□□□□□ -0.21
EBF1-210	ENST00000523464	SPATA31A7	Q8IWB4	1347 aa		13.76	□□□□□ -0.21
EBF1-210	ENST00000523464	DEFB132	Q7Z7B7	95 aa		13.76	□□□□□ -0.21
EBF1-210	ENST00000523464	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.75	□□□□□ -0.21
EBF1-210	ENST00000523464	PRR36	Q9H6K5	1346 aa		13.74	□□□□□ -0.21
EBF1-210	ENST00000523464	NRAP	Q86VF7	1730 aa		13.74	□□□□□ -0.21
EBF1-210	ENST00000523464		A0A0G2JS52	829 aa		13.74	□□□□□ -0.21
EBF1-210	ENST00000523464	MYT1	Q01538	1121 aa		13.74	□□□□□ -0.21
EBF1-210	ENST00000523464	FAM98C	Q17RN3	349 aa	Known RBP	13.74	□□□□□ -0.21
EBF1-210	ENST00000523464	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.74	□□□□□ -0.21
EBF1-210	ENST00000523464	PRDM11	Q9NQV5	511 aa		13.74	□□□□□ -0.21
EBF1-210	ENST00000523464	KDM2A	Q9Y2K7	1162 aa		13.73	□□□□□ -0.21
EBF1-210	ENST00000523464	ATP7B	P35670	1465 aa		13.73	□□□□□ -0.21
EBF1-210	ENST00000523464	ITSN1	Q15811	1721 aa		13.73	□□□□□ -0.21
EBF1-210	ENST00000523464	DISP2	A7MBM2	1401 aa		13.73	□□□□□ -0.21
EBF1-210	ENST00000523464	LRP5	O75197	1615 aa		13.72	□□□□□ -0.21
EBF1-210	ENST00000523464	PAK3	O75914	559 aa	Predicted RBP	13.72	□□□□□ -0.21
EBF1-210	ENST00000523464	NUDT16	Q96DE0	195 aa	Known RBP	13.72	□□□□□ -0.21
EBF1-210	ENST00000523464	C11orf95	C9JLR9	678 aa	Predicted RBP	13.71	□□□□□ -0.21
EBF1-210	ENST00000523464	FAM196A	Q6ZSG2	479 aa		13.71	□□□□□ -0.21
EBF1-210	ENST00000523464	CCDC61	Q9Y6R9	512 aa		13.71	□□□□□ -0.21
EBF1-210	ENST00000523464	POLR3A	O14802	1390 aa	Predicted RBP	13.71	□□□□□ -0.22
EBF1-210	ENST00000523464	BRD4	O60885	1362 aa	Predicted RBP	13.71	□□□□□ -0.22
EBF1-210	ENST00000523464	RGPD1	P0DJD0	1748 aa		13.7	□□□□□ -0.22
EBF1-210	ENST00000523464	SPATA31A1	Q5TZJ5	1347 aa		13.7	□□□□□ -0.22
EBF1-210	ENST00000523464	PLEKHG3	A1L390	1219 aa		13.7	□□□□□ -0.22
EBF1-210	ENST00000523464	PLEKHG5	O94827	1062 aa		13.7	□□□□□ -0.22
EBF1-210	ENST00000523464	PARD3	Q8TEW0	1356 aa		13.7	□□□□□ -0.22
EBF1-210	ENST00000523464	BARGIN	Q6ZT62	677 aa		13.69	□□□□□ -0.22
EBF1-210	ENST00000523464	CRYBG1	Q9Y4K1	1723 aa		13.69	□□□□□ -0.22
EBF1-210	ENST00000523464	THSD7A	Q9UPZ6	1657 aa		13.69	□□□□□ -0.22
EBF1-210	ENST00000523464	NBPF8	Q3BBV2	869 aa		13.68	□□□□□ -0.22
EBF1-210	ENST00000523464	CDK19	Q9BWU1	502 aa		13.68	□□□□□ -0.22
EBF1-210	ENST00000523464	KIAA1210	Q9ULL0	1709 aa		13.67	□□□□□ -0.22
EBF1-210	ENST00000523464	ZBTB22	O15209	634 aa		13.67	□□□□□ -0.22
EBF1-210	ENST00000523464	THRAP3	Q9Y2W1	955 aa	Known RBP	13.67	□□□□□ -0.22
EBF1-210	ENST00000523464	KIAA0232	Q92628	1395 aa		13.67	□□□□□ -0.22
EBF1-210	ENST00000523464	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.67	□□□□□ -0.22
EBF1-210	ENST00000523464	EVA1C	P58658	441 aa		13.66	□□□□□ -0.22
EBF1-210	ENST00000523464	EN1	Q05925	392 aa	Predicted RBP	13.66	□□□□□ -0.22
EBF1-210	ENST00000523464	CPD	O75976	1380 aa		13.66	□□□□□ -0.22
EBF1-210	ENST00000523464	ACE	P12821	1306 aa		13.65	□□□□□ -0.22
EBF1-210	ENST00000523464	NLRP13	Q86W25	1043 aa		13.65	□□□□□ -0.22
EBF1-210	ENST00000523464	ABTB2	Q8N961	1025 aa		13.65	□□□□□ -0.22
EBF1-210	ENST00000523464	PDE3B	Q13370	1112 aa		13.64	□□□□□ -0.23
EBF1-210	ENST00000523464	CAMKK2	Q96RR4	588 aa		13.64	□□□□□ -0.23
EBF1-210	ENST00000523464	ZC3H6	P61129	1189 aa	Known RBP	13.63	□□□□□ -0.23
EBF1-210	ENST00000523464	TCP11L2	Q8N4U5	519 aa		13.63	□□□□□ -0.23
EBF1-210	ENST00000523464	USP19	O94966	1318 aa		13.63	□□□□□ -0.23
EBF1-210	ENST00000523464	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.62	□□□□□ -0.23
EBF1-210	ENST00000523464	PSD	A5PKW4	1024 aa	Predicted RBP	13.62	□□□□□ -0.23
EBF1-210	ENST00000523464	CHRNA2	Q15822	529 aa		13.62	□□□□□ -0.23
EBF1-210	ENST00000523464	STRN4	Q9NRL3	753 aa		13.62	□□□□□ -0.23
EBF1-210	ENST00000523464	SSH2	Q76I76	1423 aa		13.62	□□□□□ -0.23
EBF1-210	ENST00000523464	TOPAZ1	Q8N9V7	1692 aa		13.62	□□□□□ -0.23
EBF1-210	ENST00000523464	APBA3	O96018	575 aa		13.61	□□□□□ -0.23
EBF1-210	ENST00000523464	TNS1	Q9HBL0	1735 aa	Known RBP	13.61	□□□□□ -0.23
EBF1-210	ENST00000523464	TRIM37	O94972	964 aa		13.6	□□□□□ -0.23
EBF1-210	ENST00000523464	GC	P02774	474 aa		13.6	□□□□□ -0.23
EBF1-210	ENST00000523464	R3HDM1	Q15032	1099 aa	Known RBP	13.6	□□□□□ -0.23
EBF1-210	ENST00000523464	EZH2	Q15910	746 aa	Known RBP	13.6	□□□□□ -0.23
EBF1-210	ENST00000523464	FAM182B	Q5T319	152 aa		13.6	□□□□□ -0.23
EBF1-210	ENST00000523464	NBPF14	Q5TI25	921 aa		13.6	□□□□□ -0.23
EBF1-210	ENST00000523464	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.6	□□□□□ -0.23
EBF1-210	ENST00000523464	SRPK2	P78362	688 aa	Known RBP	13.58	□□□□□ -0.24
EBF1-210	ENST00000523464	CAMTA1	Q9Y6Y1	1673 aa		13.58	□□□□□ -0.24
EBF1-210	ENST00000523464	PPIP5K1	Q6PFW1	1433 aa		13.57	□□□□□ -0.24
EBF1-210	ENST00000523464	LMO7	Q8WWI1	1683 aa		13.57	□□□□□ -0.24
EBF1-210	ENST00000523464	NUTM2G	Q5VZR2	741 aa		13.57	□□□□□ -0.24
EBF1-210	ENST00000523464	LARP1	Q6PKG0	1096 aa	Known RBP	13.57	□□□□□ -0.24
EBF1-210	ENST00000523464	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.57	□□□□□ -0.24
EBF1-210	ENST00000523464	USP35	Q9P2H5	1018 aa		13.57	□□□□□ -0.24
EBF1-210	ENST00000523464	NRK	Q7Z2Y5	1582 aa		13.57	□□□□□ -0.24
EBF1-210	ENST00000523464	AATK	Q6ZMQ8	1374 aa		13.57	□□□□□ -0.24
EBF1-210	ENST00000523464	NBPF1	Q3BBV0	1214 aa		13.56	□□□□□ -0.24
EBF1-210	ENST00000523464	ZNF692	Q9BU19	519 aa	Predicted RBP	13.56	□□□□□ -0.24
EBF1-210	ENST00000523464	CRB1	P82279	1406 aa		13.56	□□□□□ -0.24
EBF1-210	ENST00000523464	PLSCR1	O15162	318 aa		13.55	□□□□□ -0.24
EBF1-210	ENST00000523464	PARP4	Q9UKK3	1724 aa	Known RBP	13.54	□□□□□ -0.24
EBF1-210	ENST00000523464	NLRP6	P59044	892 aa		13.54	□□□□□ -0.24
EBF1-210	ENST00000523464	EVC2	Q86UK5	1308 aa		13.54	□□□□□ -0.24
EBF1-210	ENST00000523464	COL5A2	P05997	1499 aa	Predicted RBP	13.54	□□□□□ -0.24
EBF1-210	ENST00000523464	KCNH5	Q8NCM2	988 aa		13.53	□□□□□ -0.24
EBF1-210	ENST00000523464	CABP1	Q9NZU7	370 aa		13.53	□□□□□ -0.24
EBF1-210	ENST00000523464	OVOS2	A0A0G2JMS6	1433 aa		13.53	□□□□□ -0.24
EBF1-210	ENST00000523464	OVOS2	A0A0J9YW53	1432 aa		13.53	□□□□□ -0.24
EBF1-210	ENST00000523464	USP6	P35125	1406 aa		13.53	□□□□□ -0.24
EBF1-210	ENST00000523464	OVOS2	Q6IE36	1432 aa		13.53	□□□□□ -0.24
EBF1-210	ENST00000523464	RREB1	Q92766	1687 aa		13.53	□□□□□ -0.24
EBF1-210	ENST00000523464	CABP2	Q9NPB3	220 aa		13.52	□□□□□ -0.25
EBF1-210	ENST00000523464	FOXD4L1	Q9NU39	408 aa		13.52	□□□□□ -0.25
EBF1-210	ENST00000523464	BCL9	O00512	1426 aa		13.52	□□□□□ -0.25
EBF1-210	ENST00000523464	SLIT3	O75094	1523 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms