RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ADGRB2O60241 1585 aa17.35■□□□□ 0.37
SDCBP-211ENST00000523441 ALS2Q96Q42 1657 aa17.35■□□□□ 0.37
SDCBP-211ENST00000523441 APBA3O96018 575 aa17.34■□□□□ 0.37
SDCBP-211ENST00000523441 CHRNA2Q15822 529 aa17.34■□□□□ 0.37
SDCBP-211ENST00000523441 GPRASP1Q5JY77 1395 aa17.34■□□□□ 0.37
SDCBP-211ENST00000523441 SPATA31A5Q5VU36 1347 aa17.34■□□□□ 0.37
SDCBP-211ENST00000523441 SPATA31A7Q8IWB4 1347 aa17.34■□□□□ 0.37
SDCBP-211ENST00000523441 MPHOSPH9Q99550 1183 aa17.34■□□□□ 0.37
SDCBP-211ENST00000523441 THSD7AQ9UPZ6 1657 aa17.33■□□□□ 0.37
SDCBP-211ENST00000523441 C14orf93Q9H972 538 aaKnown RBP17.33■□□□□ 0.36
SDCBP-211ENST00000523441 NGDNQ8NEJ9 315 aaKnown RBP17.32■□□□□ 0.36
SDCBP-211ENST00000523441 TRAK1Q9UPV9 953 aa17.32■□□□□ 0.36
SDCBP-211ENST00000523441 CRYBG1Q9Y4K1 1723 aa17.31■□□□□ 0.36
SDCBP-211ENST00000523441 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
SDCBP-211ENST00000523441 SIRT1Q96EB6 747 aa17.31■□□□□ 0.36
SDCBP-211ENST00000523441 PPP1R1BQ9UD71 204 aaPredicted RBP17.3■□□□□ 0.36
SDCBP-211ENST00000523441 ACIN1Q9UKV3 1341 aaKnown RBP17.29■□□□□ 0.36
SDCBP-211ENST00000523441 ZC3H6P61129 1189 aaKnown RBP17.29■□□□□ 0.36
SDCBP-211ENST00000523441 CAMKK2Q96RR4 588 aa17.29■□□□□ 0.36
SDCBP-211ENST00000523441 ANKARQ7Z5J8 1434 aa17.29■□□□□ 0.36
SDCBP-211ENST00000523441 PRR36Q9H6K5 1346 aa17.28■□□□□ 0.36
SDCBP-211ENST00000523441 NUP188Q5SRE5 1749 aa17.28■□□□□ 0.36
SDCBP-211ENST00000523441 FAM196AQ6ZSG2 479 aa17.28■□□□□ 0.36
SDCBP-211ENST00000523441 KIAA0232Q92628 1395 aa17.28■□□□□ 0.36
SDCBP-211ENST00000523441 RREB1Q92766 1687 aa17.26■□□□□ 0.35
SDCBP-211ENST00000523441 SPATA31A1Q5TZJ5 1347 aa17.26■□□□□ 0.35
SDCBP-211ENST00000523441 PHRF1Q9P1Y6 1649 aaKnown RBP17.26■□□□□ 0.35
SDCBP-211ENST00000523441 EVA1CP58658 441 aa17.26■□□□□ 0.35
SDCBP-211ENST00000523441 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
SDCBP-211ENST00000523441 KDM2AQ9Y2K7 1162 aa17.26■□□□□ 0.35
SDCBP-211ENST00000523441 DISP2A7MBM2 1401 aa17.26■□□□□ 0.35
SDCBP-211ENST00000523441 CAMTA1Q9Y6Y1 1673 aa17.24■□□□□ 0.35
SDCBP-211ENST00000523441 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
SDCBP-211ENST00000523441 NBPF14Q5TI25 921 aa17.24■□□□□ 0.35
SDCBP-211ENST00000523441 TULP4Q9NRJ4 1543 aa17.24■□□□□ 0.35
SDCBP-211ENST00000523441 DLC1Q96QB1 1528 aa17.23■□□□□ 0.35
SDCBP-211ENST00000523441 DCAF8L1A6NGE4 600 aa17.23■□□□□ 0.35
SDCBP-211ENST00000523441 ITSN1Q15811 1721 aa17.22■□□□□ 0.35
SDCBP-211ENST00000523441 ZBTB7CA1YPR0 619 aa17.22■□□□□ 0.35
SDCBP-211ENST00000523441 WASLO00401 505 aaPredicted RBP17.22■□□□□ 0.35
SDCBP-211ENST00000523441 EIF3AQ14152 1382 aaKnown RBP17.2■□□□□ 0.34
SDCBP-211ENST00000523441 LARP1Q6PKG0 1096 aaKnown RBP17.19■□□□□ 0.34
SDCBP-211ENST00000523441 SPON1Q9HCB6 807 aa17.19■□□□□ 0.34
SDCBP-211ENST00000523441 ADGRB1O14514 1584 aa17.19■□□□□ 0.34
SDCBP-211ENST00000523441 PARD3Q8TEW0 1356 aa17.17■□□□□ 0.34
SDCBP-211ENST00000523441 KCNQ2O43526 872 aa17.17■□□□□ 0.34
SDCBP-211ENST00000523441 SSH2Q76I76 1423 aa17.17■□□□□ 0.34
SDCBP-211ENST00000523441 NUDT16Q96DE0 195 aaKnown RBP17.17■□□□□ 0.34
SDCBP-211ENST00000523441 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
SDCBP-211ENST00000523441 ARHGEF28Q8N1W1 1705 aaKnown RBP17.15■□□□□ 0.34
SDCBP-211ENST00000523441 ATP7BP35670 1465 aa17.14■□□□□ 0.33
SDCBP-211ENST00000523441 TCP11L2Q8N4U5 519 aa17.14■□□□□ 0.33
SDCBP-211ENST00000523441 NRKQ7Z2Y5 1582 aa17.14■□□□□ 0.33
SDCBP-211ENST00000523441 ABTB2Q8N961 1025 aa17.13■□□□□ 0.33
SDCBP-211ENST00000523441 BARGINQ6ZT62 677 aa17.12■□□□□ 0.33
SDCBP-211ENST00000523441 CDK19Q9BWU1 502 aa17.12■□□□□ 0.33
SDCBP-211ENST00000523441 ACEP12821 1306 aa17.12■□□□□ 0.33
SDCBP-211ENST00000523441 ZBTB7AO95365 584 aa17.11■□□□□ 0.33
SDCBP-211ENST00000523441 PDGFDQ9GZP0 370 aaPredicted RBP17.11■□□□□ 0.33
SDCBP-211ENST00000523441 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
SDCBP-211ENST00000523441 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
SDCBP-211ENST00000523441 NINLQ9Y2I6 1382 aa17.1■□□□□ 0.33
SDCBP-211ENST00000523441 BCL11BQ9C0K0 894 aaPredicted RBP17.09■□□□□ 0.33
SDCBP-211ENST00000523441 ANO8Q9HCE9 1232 aaPredicted RBP17.09■□□□□ 0.33
SDCBP-211ENST00000523441 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
SDCBP-211ENST00000523441 MYOM1P52179 1685 aa17.09■□□□□ 0.33
SDCBP-211ENST00000523441 LMO7Q8WWI1 1683 aa17.09■□□□□ 0.33
SDCBP-211ENST00000523441 TOPAZ1Q8N9V7 1692 aa17.08■□□□□ 0.32
SDCBP-211ENST00000523441 PTF1AQ7RTS3 328 aa17.08■□□□□ 0.32
SDCBP-211ENST00000523441 CASZ1Q86V15 1759 aa17.07■□□□□ 0.32
SDCBP-211ENST00000523441 LRRC37A3O60309 1634 aa17.06■□□□□ 0.32
SDCBP-211ENST00000523441 OVOS2A0A0G2JMS6 1433 aa17.05■□□□□ 0.32
SDCBP-211ENST00000523441 OVOS2A0A0J9YW53 1432 aa17.05■□□□□ 0.32
SDCBP-211ENST00000523441 OVOS2Q6IE36 1432 aa17.05■□□□□ 0.32
SDCBP-211ENST00000523441 COL5A2P05997 1499 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-211ENST00000523441 PEAK1Q9H792 1746 aa17.04■□□□□ 0.32
SDCBP-211ENST00000523441 SENP3-EIF4A1A0A087X0R7 540 aa17.04■□□□□ 0.32
SDCBP-211ENST00000523441 GCP02774 474 aa17.04■□□□□ 0.32
SDCBP-211ENST00000523441 DDB1Q16531 1140 aa17.04■□□□□ 0.32
SDCBP-211ENST00000523441 TOM1L2Q6ZVM7 507 aa17.04■□□□□ 0.32
SDCBP-211ENST00000523441 AKAP12Q02952 1782 aa17.04■□□□□ 0.32
SDCBP-211ENST00000523441 SRPK2P78362 688 aaKnown RBP17.03■□□□□ 0.32
SDCBP-211ENST00000523441 NLRP13Q86W25 1043 aa17.03■□□□□ 0.32
SDCBP-211ENST00000523441 ZNF784Q8NCA9 323 aaPredicted RBP17.03■□□□□ 0.32
SDCBP-211ENST00000523441 THRAP3Q9Y2W1 955 aaKnown RBP17.03■□□□□ 0.32
SDCBP-211ENST00000523441 CRB1P82279 1406 aa17.03■□□□□ 0.32
SDCBP-211ENST00000523441 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.32
SDCBP-211ENST00000523441 CCDC61Q9Y6R9 512 aa17.02■□□□□ 0.32
SDCBP-211ENST00000523441 RGPD3A6NKT7 1758 aaPredicted RBP17.02■□□□□ 0.31
SDCBP-211ENST00000523441 RGPD4Q7Z3J3 1758 aa17.02■□□□□ 0.31
SDCBP-211ENST00000523441 CPDO75976 1380 aa17.02■□□□□ 0.31
SDCBP-211ENST00000523441 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.31
SDCBP-211ENST00000523441 WNK3Q9BYP7 1800 aa17.01■□□□□ 0.31
SDCBP-211ENST00000523441 SOX12O15370 315 aa17.01■□□□□ 0.31
SDCBP-211ENST00000523441 RGPD5Q99666 1765 aa17.01■□□□□ 0.31
SDCBP-211ENST00000523441 USP19O94966 1318 aa17■□□□□ 0.31
SDCBP-211ENST00000523441 PPIP5K1Q6PFW1 1433 aa17■□□□□ 0.31
SDCBP-211ENST00000523441 CABP2Q9NPB3 220 aa17■□□□□ 0.31
SDCBP-211ENST00000523441 PLSCR1O15162 318 aa16.99■□□□□ 0.31
SDCBP-211ENST00000523441 NLRP6P59044 892 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms