RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 COL14A1Q05707 1796 aaKnown RBP15.61■□□□□ 0.09
PVT1-216ENST00000523068 POLR3AO14802 1390 aaPredicted RBP15.61■□□□□ 0.09
PVT1-216ENST00000523068 ROCK2O75116 1388 aaKnown RBP15.61■□□□□ 0.09
PVT1-216ENST00000523068 SRPK2P78362 688 aaKnown RBP15.6■□□□□ 0.09
PVT1-216ENST00000523068 ATAD2Q6PL18 1390 aa15.6■□□□□ 0.09
PVT1-216ENST00000523068 PLEKHG3A1L390 1219 aa15.59■□□□□ 0.09
PVT1-216ENST00000523068 ACEP12821 1306 aa15.59■□□□□ 0.09
PVT1-216ENST00000523068 RALGAPBQ86X10 1494 aa15.59■□□□□ 0.09
PVT1-216ENST00000523068 GLI3P10071 1580 aa15.58■□□□□ 0.09
PVT1-216ENST00000523068 PHRF1Q9P1Y6 1649 aaKnown RBP15.58■□□□□ 0.09
PVT1-216ENST00000523068 NRAPQ86VF7 1730 aa15.58■□□□□ 0.08
PVT1-216ENST00000523068 VPS72Q15906 364 aa15.57■□□□□ 0.08
PVT1-216ENST00000523068 NBPF8Q3BBV2 869 aa15.57■□□□□ 0.08
PVT1-216ENST00000523068 PPIP5K1Q6PFW1 1433 aa15.57■□□□□ 0.08
PVT1-216ENST00000523068 FAM83GA6ND36 823 aa15.56■□□□□ 0.08
PVT1-216ENST00000523068 TONSLQ96HA7 1378 aa15.56■□□□□ 0.08
PVT1-216ENST00000523068 BRWD3Q6RI45 1802 aa15.55■□□□□ 0.08
PVT1-216ENST00000523068 EVC2Q86UK5 1308 aa15.55■□□□□ 0.08
PVT1-216ENST00000523068 CABP2Q9NPB3 220 aa15.55■□□□□ 0.08
PVT1-216ENST00000523068 CCDC9Q9Y3X0 531 aaKnown RBP15.55■□□□□ 0.08
PVT1-216ENST00000523068 BRD4O60885 1362 aaPredicted RBP15.54■□□□□ 0.08
PVT1-216ENST00000523068 BTG4Q9NY30 223 aa15.53■□□□□ 0.08
PVT1-216ENST00000523068 ABTB2Q8N961 1025 aa15.52■□□□□ 0.08
PVT1-216ENST00000523068 PRDM11Q9NQV5 511 aa15.52■□□□□ 0.08
PVT1-216ENST00000523068 AKAP12Q02952 1782 aa15.5■□□□□ 0.07
PVT1-216ENST00000523068 ONECUT3O60422 494 aaPredicted RBP15.5■□□□□ 0.07
PVT1-216ENST00000523068 NUTM2GQ5VZR2 741 aa15.5■□□□□ 0.07
PVT1-216ENST00000523068 CCDC125Q86Z20 511 aa15.5■□□□□ 0.07
PVT1-216ENST00000523068 CABP1Q9NZU7 370 aa15.5■□□□□ 0.07
PVT1-216ENST00000523068 KIAA0232Q92628 1395 aa15.49■□□□□ 0.07
PVT1-216ENST00000523068 NRKQ7Z2Y5 1582 aa15.49■□□□□ 0.07
PVT1-216ENST00000523068 EP400Q96L91 3159 aa15.49■□□□□ 0.07
PVT1-216ENST00000523068 NLRP13Q86W25 1043 aa15.49■□□□□ 0.07
PVT1-216ENST00000523068 SEPT12Q8IYM1 358 aa15.49■□□□□ 0.07
PVT1-216ENST00000523068 CARD11Q9BXL7 1154 aa15.49■□□□□ 0.07
PVT1-216ENST00000523068 USP6P35125 1406 aa15.49■□□□□ 0.07
PVT1-216ENST00000523068 SBNO2Q9Y2G9 1366 aa15.49■□□□□ 0.07
PVT1-216ENST00000523068 ZC3H6P61129 1189 aaKnown RBP15.47■□□□□ 0.07
PVT1-216ENST00000523068 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
PVT1-216ENST00000523068 USP19O94966 1318 aa15.46■□□□□ 0.07
PVT1-216ENST00000523068 A0A0G2JS52 829 aa15.46■□□□□ 0.07
PVT1-216ENST00000523068 MYT1Q01538 1121 aa15.46■□□□□ 0.07
PVT1-216ENST00000523068 CPDO75976 1380 aa15.46■□□□□ 0.07
PVT1-216ENST00000523068 SPATA31A5Q5VU36 1347 aa15.45■□□□□ 0.06
PVT1-216ENST00000523068 SPATA31A7Q8IWB4 1347 aa15.45■□□□□ 0.06
PVT1-216ENST00000523068 PIK3C2AO00443 1686 aa15.45■□□□□ 0.06
PVT1-216ENST00000523068 CHRNA2Q15822 529 aa15.45■□□□□ 0.06
PVT1-216ENST00000523068 GCP02774 474 aa15.44■□□□□ 0.06
PVT1-216ENST00000523068 FAM98CQ17RN3 349 aaKnown RBP15.44■□□□□ 0.06
PVT1-216ENST00000523068 KRT27Q7Z3Y8 459 aa15.44■□□□□ 0.06
PVT1-216ENST00000523068 LMO7Q8WWI1 1683 aa15.44■□□□□ 0.06
PVT1-216ENST00000523068 BLMP54132 1417 aaPredicted RBP15.43■□□□□ 0.06
PVT1-216ENST00000523068 SSH2Q76I76 1423 aa15.43■□□□□ 0.06
PVT1-216ENST00000523068 MON2Q7Z3U7 1717 aa15.43■□□□□ 0.06
PVT1-216ENST00000523068 EVA1CP58658 441 aa15.43■□□□□ 0.06
PVT1-216ENST00000523068 NLRP6P59044 892 aa15.43■□□□□ 0.06
PVT1-216ENST00000523068 STRN4Q9NRL3 753 aa15.43■□□□□ 0.06
PVT1-216ENST00000523068 THSD7AQ9UPZ6 1657 aa15.43■□□□□ 0.06
PVT1-216ENST00000523068 SLIT3O75094 1523 aa15.43■□□□□ 0.06
PVT1-216ENST00000523068 SPATA31A1Q5TZJ5 1347 aa15.42■□□□□ 0.06
PVT1-216ENST00000523068 CAMTA1Q9Y6Y1 1673 aa15.41■□□□□ 0.06
PVT1-216ENST00000523068 SF3B2Q13435 895 aaKnown RBP15.41■□□□□ 0.06
PVT1-216ENST00000523068 CPSF1Q10570 1443 aaKnown RBP15.41■□□□□ 0.06
PVT1-216ENST00000523068 TTC21AQ8NDW8 1320 aa15.41■□□□□ 0.06
PVT1-216ENST00000523068 KTN1Q86UP2 1357 aaKnown RBP15.4■□□□□ 0.06
PVT1-216ENST00000523068 SLC24A1O60721 1099 aa15.4■□□□□ 0.06
PVT1-216ENST00000523068 TTC21BQ7Z4L5 1316 aa15.4■□□□□ 0.06
PVT1-216ENST00000523068 PCGF6Q9BYE7 350 aa15.39■□□□□ 0.05
PVT1-216ENST00000523068 RGPD1P0DJD0 1748 aa15.39■□□□□ 0.05
PVT1-216ENST00000523068 KCNH5Q8NCM2 988 aa15.38■□□□□ 0.05
PVT1-216ENST00000523068 PUS7Q96PZ0 661 aaKnown RBP15.38■□□□□ 0.05
PVT1-216ENST00000523068 USP35Q9P2H5 1018 aa15.37■□□□□ 0.05
PVT1-216ENST00000523068 COL5A2P05997 1499 aaPredicted RBP15.37■□□□□ 0.05
PVT1-216ENST00000523068 USP54Q70EL1 1684 aa15.37■□□□□ 0.05
PVT1-216ENST00000523068 CLSPNQ9HAW4 1339 aa15.37■□□□□ 0.05
PVT1-216ENST00000523068 AATKQ6ZMQ8 1374 aa15.36■□□□□ 0.05
PVT1-216ENST00000523068 COL18A1P39060 1754 aa15.36■□□□□ 0.05
PVT1-216ENST00000523068 ZBTB7CA1YPR0 619 aa15.36■□□□□ 0.05
PVT1-216ENST00000523068 LARP1Q6PKG0 1096 aaKnown RBP15.36■□□□□ 0.05
PVT1-216ENST00000523068 BARGINQ6ZT62 677 aa15.36■□□□□ 0.05
PVT1-216ENST00000523068 HDGFL2Q7Z4V5 671 aaPredicted RBP15.36■□□□□ 0.05
PVT1-216ENST00000523068 TMC1Q8TDI8 760 aa15.36■□□□□ 0.05
PVT1-216ENST00000523068 ZRANB1Q9UGI0 708 aa15.36■□□□□ 0.05
PVT1-216ENST00000523068 THRAP3Q9Y2W1 955 aaKnown RBP15.36■□□□□ 0.05
PVT1-216ENST00000523068 RGPD5Q99666 1765 aa15.36■□□□□ 0.05
PVT1-216ENST00000523068 TCP11L2Q8N4U5 519 aa15.35■□□□□ 0.05
PVT1-216ENST00000523068 TERF2IPQ9NYB0 399 aa15.35■□□□□ 0.05
PVT1-216ENST00000523068 CRB1P82279 1406 aa15.34■□□□□ 0.05
PVT1-216ENST00000523068 PARP4Q9UKK3 1724 aaKnown RBP15.34■□□□□ 0.05
PVT1-216ENST00000523068 CD163L1Q9NR16 1453 aa15.34■□□□□ 0.05
PVT1-216ENST00000523068 ST20-MTHFSA0A0A6YYL1 179 aa15.34■□□□□ 0.05
PVT1-216ENST00000523068 TIMELESSQ9UNS1 1208 aa15.34■□□□□ 0.05
PVT1-216ENST00000523068 NINLQ9Y2I6 1382 aa15.34■□□□□ 0.05
PVT1-216ENST00000523068 TESK2Q96S53 571 aa15.33■□□□□ 0.04
PVT1-216ENST00000523068 EDC4Q6P2E9 1401 aaKnown RBP15.33■□□□□ 0.04
PVT1-216ENST00000523068 ABCC6O95255 1503 aa15.33■□□□□ 0.04
PVT1-216ENST00000523068 LTN1O94822 1766 aa15.32■□□□□ 0.04
PVT1-216ENST00000523068 BAG6P46379 1132 aa15.32■□□□□ 0.04
PVT1-216ENST00000523068 PDE3BQ13370 1112 aa15.32■□□□□ 0.04
PVT1-216ENST00000523068 ARHGEF25Q86VW2 580 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms