RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 TMX1Q9H3N1 280 aa10.05□□□□□ -0.8
HMGB4-204ENST00000522796 RCAN3Q9UKA8 241 aa10.05□□□□□ -0.8
HMGB4-204ENST00000522796 ERICH4A6NGS2 130 aa10.05□□□□□ -0.8
HMGB4-204ENST00000522796 IPO7O95373 1038 aaKnown RBP10.05□□□□□ -0.8
HMGB4-204ENST00000522796 TRERF1Q96PN7 1200 aa10.05□□□□□ -0.8
HMGB4-204ENST00000522796 NOL10Q9BSC4 688 aaKnown RBP10.05□□□□□ -0.8
HMGB4-204ENST00000522796 TBC1D2Q9BYX2 928 aa10.05□□□□□ -0.8
HMGB4-204ENST00000522796 CTNNA3Q9UI47 895 aa10.05□□□□□ -0.8
HMGB4-204ENST00000522796 RAB3GAP2Q9H2M9 1393 aa10.05□□□□□ -0.8
HMGB4-204ENST00000522796 TESPA1A2RU30 521 aaPredicted RBP10.04□□□□□ -0.8
HMGB4-204ENST00000522796 LIG1P18858 919 aa10.04□□□□□ -0.8
HMGB4-204ENST00000522796 PABPN1Q86U42 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
HMGB4-204ENST00000522796 JRKLQ9Y4A0 524 aa10.04□□□□□ -0.8
HMGB4-204ENST00000522796 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
HMGB4-204ENST00000522796 CCDC144AA2RUR9 1427 aa10.04□□□□□ -0.8
HMGB4-204ENST00000522796 TNNT1P13805 278 aa10.04□□□□□ -0.8
HMGB4-204ENST00000522796 SYCP1Q15431 976 aa10.04□□□□□ -0.8
HMGB4-204ENST00000522796 TNPO1Q92973 898 aaKnown RBP10.04□□□□□ -0.8
HMGB4-204ENST00000522796 KIAA1107Q9UPP5 1409 aa10.03□□□□□ -0.8
HMGB4-204ENST00000522796 REC8O95072 547 aa10.03□□□□□ -0.8
HMGB4-204ENST00000522796 RHBDL3P58872 404 aa10.03□□□□□ -0.8
HMGB4-204ENST00000522796 MUM1L1Q5H9M0 696 aa10.03□□□□□ -0.8
HMGB4-204ENST00000522796 KRT222Q8N1A0 295 aa10.03□□□□□ -0.8
HMGB4-204ENST00000522796 CTIFO43310 598 aaKnown RBP10.03□□□□□ -0.8
HMGB4-204ENST00000522796 CYP2C19P33261 490 aa10.03□□□□□ -0.8
HMGB4-204ENST00000522796 SF3A1Q15459 793 aaKnown RBP10.03□□□□□ -0.8
HMGB4-204ENST00000522796 EVI5LQ96CN4 794 aa10.03□□□□□ -0.8
HMGB4-204ENST00000522796 TOMM22Q9NS69 142 aa10.03□□□□□ -0.8
HMGB4-204ENST00000522796 GOLGA6L1Q8N7Z2 621 aa10.02□□□□□ -0.8
HMGB4-204ENST00000522796 SUDS3Q9H7L9 328 aaPredicted RBP10.02□□□□□ -0.8
HMGB4-204ENST00000522796 ATP2B1P20020 1258 aa10.02□□□□□ -0.81
HMGB4-204ENST00000522796 RBM5P52756 815 aaKnown RBP eCLIP10.02□□□□□ -0.81
HMGB4-204ENST00000522796 NUCKS1Q9H1E3 243 aaKnown RBP10.02□□□□□ -0.81
HMGB4-204ENST00000522796 TPM3P06753 285 aa10.01□□□□□ -0.81
HMGB4-204ENST00000522796 CHAF1AQ13111 956 aaPredicted RBP10.01□□□□□ -0.81
HMGB4-204ENST00000522796 GBP4Q96PP9 640 aa10.01□□□□□ -0.81
HMGB4-204ENST00000522796 DEF6Q9H4E7 631 aa10.01□□□□□ -0.81
HMGB4-204ENST00000522796 NPC1L1Q9UHC9 1359 aa10.01□□□□□ -0.81
HMGB4-204ENST00000522796 TPD52L2O43399 206 aaKnown RBP10.01□□□□□ -0.81
HMGB4-204ENST00000522796 ZNF445P59923 1031 aa10.01□□□□□ -0.81
HMGB4-204ENST00000522796 DIAPH3Q9NSV4 1193 aa10.01□□□□□ -0.81
HMGB4-204ENST00000522796 ATP6V1AP38606 617 aa10□□□□□ -0.81
HMGB4-204ENST00000522796 SRPK2P78362 688 aaKnown RBP10□□□□□ -0.81
HMGB4-204ENST00000522796 HDGFL1Q5TGJ6 251 aa10□□□□□ -0.81
HMGB4-204ENST00000522796 KRBA2Q6ZNG9 492 aa10□□□□□ -0.81
HMGB4-204ENST00000522796 RPAINQ86UA6 219 aa10□□□□□ -0.81
HMGB4-204ENST00000522796 PAXBP1Q9Y5B6 917 aa10□□□□□ -0.81
HMGB4-204ENST00000522796 GOLGA6L22H0YM25 854 aa10□□□□□ -0.81
HMGB4-204ENST00000522796 CCDC181Q5TID7 509 aa10□□□□□ -0.81
HMGB4-204ENST00000522796 ACRBPQ8NEB7 543 aa10□□□□□ -0.81
HMGB4-204ENST00000522796 PIBF1Q8WXW3 757 aa10□□□□□ -0.81
HMGB4-204ENST00000522796 GYS2P54840 703 aa9.99□□□□□ -0.81
HMGB4-204ENST00000522796 TSGA10IPQ3SY00 556 aa9.99□□□□□ -0.81
HMGB4-204ENST00000522796 TBC1D22AQ8WUA7 517 aa9.99□□□□□ -0.81
HMGB4-204ENST00000522796 DRC1Q96MC2 740 aa9.99□□□□□ -0.81
HMGB4-204ENST00000522796 ERBB3P21860 1342 aa9.99□□□□□ -0.81
HMGB4-204ENST00000522796 CCDC196A0A1B0GTZ2 297 aa9.99□□□□□ -0.81
HMGB4-204ENST00000522796 A0A1B0GUL7 405 aa9.99□□□□□ -0.81
HMGB4-204ENST00000522796 MYO1CO00159 1063 aa9.99□□□□□ -0.81
HMGB4-204ENST00000522796 FKBP5Q13451 457 aaPredicted RBP9.99□□□□□ -0.81
HMGB4-204ENST00000522796 MAP9Q49MG5 647 aa9.99□□□□□ -0.81
HMGB4-204ENST00000522796 CXorf38Q8TB03 319 aa9.99□□□□□ -0.81
HMGB4-204ENST00000522796 KCNV2Q8TDN2 545 aa9.99□□□□□ -0.81
HMGB4-204ENST00000522796 POLKQ9UBT6 870 aa9.99□□□□□ -0.81
HMGB4-204ENST00000522796 NUTM2GQ5VZR2 741 aa9.98□□□□□ -0.81
HMGB4-204ENST00000522796 FAM53CQ9NYF3 392 aa9.98□□□□□ -0.81
HMGB4-204ENST00000522796 FAM177BA6PVY3 158 aa9.98□□□□□ -0.81
HMGB4-204ENST00000522796 H0YHG0 523 aa9.98□□□□□ -0.81
HMGB4-204ENST00000522796 EPB41L2O43491 1005 aaKnown RBP9.98□□□□□ -0.81
HMGB4-204ENST00000522796 HSPA5P11021 654 aaKnown RBP9.98□□□□□ -0.81
HMGB4-204ENST00000522796 CD151P48509 253 aa9.98□□□□□ -0.81
HMGB4-204ENST00000522796 SARNPP82979 210 aaKnown RBP9.98□□□□□ -0.81
HMGB4-204ENST00000522796 PPP2R5AQ15172 486 aa9.98□□□□□ -0.81
HMGB4-204ENST00000522796 DDX49Q9Y6V7 483 aaKnown RBP9.98□□□□□ -0.81
HMGB4-204ENST00000522796 MAP3K1Q13233 1512 aa9.98□□□□□ -0.81
HMGB4-204ENST00000522796 ERCC3P19447 782 aa9.97□□□□□ -0.81
HMGB4-204ENST00000522796 NOLC1Q14978 699 aaKnown RBP eCLIP9.97□□□□□ -0.81
HMGB4-204ENST00000522796 SUGP1Q8IWZ8 645 aaKnown RBP9.97□□□□□ -0.81
HMGB4-204ENST00000522796 KIF18AQ8NI77 898 aa9.97□□□□□ -0.81
HMGB4-204ENST00000522796 ZCRB1Q8TBF4 217 aaKnown RBP9.97□□□□□ -0.81
HMGB4-204ENST00000522796 CRBNQ96SW2 442 aa9.97□□□□□ -0.81
HMGB4-204ENST00000522796 FRMD4BQ9Y2L6 1034 aa9.97□□□□□ -0.81
HMGB4-204ENST00000522796 ANKRD33BA6NCL7 494 aa9.97□□□□□ -0.81
HMGB4-204ENST00000522796 SMARCA5O60264 1052 aaPredicted RBP9.97□□□□□ -0.81
HMGB4-204ENST00000522796 KLHL40Q2TBA0 621 aa9.97□□□□□ -0.81
HMGB4-204ENST00000522796 ZKSCAN2Q63HK3 967 aa9.97□□□□□ -0.81
HMGB4-204ENST00000522796 FAM212AQ96EL1 285 aa9.97□□□□□ -0.81
HMGB4-204ENST00000522796 TBC1D32Q96NH3 1257 aa9.97□□□□□ -0.81
HMGB4-204ENST00000522796 ATG3Q9NT62 314 aa9.97□□□□□ -0.81
HMGB4-204ENST00000522796 SPTLC3Q9NUV7 552 aa9.97□□□□□ -0.81
HMGB4-204ENST00000522796 ABCA5Q8WWZ7 1642 aa9.96□□□□□ -0.81
HMGB4-204ENST00000522796 MARCH6O60337 910 aa9.96□□□□□ -0.81
HMGB4-204ENST00000522796 C10orf67Q8IYJ2 551 aa9.96□□□□□ -0.81
HMGB4-204ENST00000522796 FAM184AQ8NB25 1140 aa9.96□□□□□ -0.81
HMGB4-204ENST00000522796 ZNF446Q9NWS9 450 aa9.96□□□□□ -0.81
HMGB4-204ENST00000522796 RBM27Q9P2N5 1060 aaKnown RBP9.96□□□□□ -0.81
HMGB4-204ENST00000522796 CIZ1Q9ULV3 898 aaPredicted RBP9.96□□□□□ -0.81
HMGB4-204ENST00000522796 NCOA3Q9Y6Q9 1424 aa9.96□□□□□ -0.81
HMGB4-204ENST00000522796 PAX3P23760 479 aa9.96□□□□□ -0.82
HMGB4-204ENST00000522796 ABCD1P33897 745 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms