RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 FAM50AQ14320 339 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-212ENST00000521944 KRT28Q7Z3Y7 464 aa13.82□□□□□ -0.2
TRAPPC9-212ENST00000521944 SENP3-EIF4A1A0A087X0R7 540 aa13.81□□□□□ -0.2
TRAPPC9-212ENST00000521944 A0A0G2JS52 829 aa13.81□□□□□ -0.2
TRAPPC9-212ENST00000521944 MYT1Q01538 1121 aa13.81□□□□□ -0.2
TRAPPC9-212ENST00000521944 NAIPQ13075 1403 aa13.81□□□□□ -0.2
TRAPPC9-212ENST00000521944 CAMTA1Q9Y6Y1 1673 aa13.8□□□□□ -0.2
TRAPPC9-212ENST00000521944 LOC105371045A0A1W2PR82 267 aa13.8□□□□□ -0.2
TRAPPC9-212ENST00000521944 TRIM37O94972 964 aa13.8□□□□□ -0.2
TRAPPC9-212ENST00000521944 WAPLQ7Z5K2 1190 aa13.8□□□□□ -0.2
TRAPPC9-212ENST00000521944 MIER1Q8N108 512 aa13.8□□□□□ -0.2
TRAPPC9-212ENST00000521944 CLTCL1P53675 1640 aa13.79□□□□□ -0.2
TRAPPC9-212ENST00000521944 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
TRAPPC9-212ENST00000521944 CREBZFQ9NS37 354 aa13.79□□□□□ -0.2
TRAPPC9-212ENST00000521944 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
TRAPPC9-212ENST00000521944 CCDC144AA2RUR9 1427 aa13.78□□□□□ -0.2
TRAPPC9-212ENST00000521944 NRAPQ86VF7 1730 aa13.78□□□□□ -0.2
TRAPPC9-212ENST00000521944 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC9-212ENST00000521944 C1QTNF8P60827 252 aa13.77□□□□□ -0.21
TRAPPC9-212ENST00000521944 SPATA31A5Q5VU36 1347 aa13.77□□□□□ -0.21
TRAPPC9-212ENST00000521944 TNS3Q68CZ2 1445 aa13.77□□□□□ -0.21
TRAPPC9-212ENST00000521944 SPATA31A7Q8IWB4 1347 aa13.77□□□□□ -0.21
TRAPPC9-212ENST00000521944 BTG4Q9NY30 223 aa13.77□□□□□ -0.21
TRAPPC9-212ENST00000521944 PLEKHH1Q9ULM0 1364 aa13.77□□□□□ -0.21
TRAPPC9-212ENST00000521944 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.21
TRAPPC9-212ENST00000521944 KCNQ2O43526 872 aa13.76□□□□□ -0.21
TRAPPC9-212ENST00000521944 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-212ENST00000521944 SPON1Q9HCB6 807 aa13.76□□□□□ -0.21
TRAPPC9-212ENST00000521944 ABCA3Q99758 1704 aa13.76□□□□□ -0.21
TRAPPC9-212ENST00000521944 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
TRAPPC9-212ENST00000521944 ROCK1Q13464 1354 aa13.75□□□□□ -0.21
TRAPPC9-212ENST00000521944 APBA3O96018 575 aa13.75□□□□□ -0.21
TRAPPC9-212ENST00000521944 VASPP50552 380 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-212ENST00000521944 PARD3Q8TEW0 1356 aa13.74□□□□□ -0.21
TRAPPC9-212ENST00000521944 ZBTB47Q9UFB7 747 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-212ENST00000521944 SBNO1A3KN83 1393 aa13.73□□□□□ -0.21
TRAPPC9-212ENST00000521944 RREB1Q92766 1687 aa13.73□□□□□ -0.21
TRAPPC9-212ENST00000521944 FAM196AQ6ZSG2 479 aa13.73□□□□□ -0.21
TRAPPC9-212ENST00000521944 PPP1R1BQ9UD71 204 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC9-212ENST00000521944 NUP188Q5SRE5 1749 aa13.73□□□□□ -0.21
TRAPPC9-212ENST00000521944 STK26Q9P289 416 aa13.72□□□□□ -0.21
TRAPPC9-212ENST00000521944 PHF8Q9UPP1 1060 aa13.72□□□□□ -0.21
TRAPPC9-212ENST00000521944 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC9-212ENST00000521944 TECPR2O15040 1411 aa13.72□□□□□ -0.21
TRAPPC9-212ENST00000521944 FMN2Q9NZ56 1722 aa13.71□□□□□ -0.21
TRAPPC9-212ENST00000521944 PSME1Q06323 249 aa13.71□□□□□ -0.21
TRAPPC9-212ENST00000521944 LMOD2Q6P5Q4 547 aa13.71□□□□□ -0.21
TRAPPC9-212ENST00000521944 PDGFDQ9GZP0 370 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC9-212ENST00000521944 KIF1AQ12756 1690 aa13.71□□□□□ -0.21
TRAPPC9-212ENST00000521944 RGPD8O14715 1765 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC9-212ENST00000521944 NBPF8Q3BBV2 869 aa13.69□□□□□ -0.22
TRAPPC9-212ENST00000521944 NBPF14Q5TI25 921 aa13.69□□□□□ -0.22
TRAPPC9-212ENST00000521944 ADGRB2O60241 1585 aa13.69□□□□□ -0.22
TRAPPC9-212ENST00000521944 ARHGEF10O15013 1369 aa13.69□□□□□ -0.22
TRAPPC9-212ENST00000521944 ABCC11Q96J66 1382 aa13.69□□□□□ -0.22
TRAPPC9-212ENST00000521944 NRXN1Q9ULB1 1477 aa13.68□□□□□ -0.22
TRAPPC9-212ENST00000521944 SPATA31A1Q5TZJ5 1347 aa13.68□□□□□ -0.22
TRAPPC9-212ENST00000521944 RPGRIP1LQ68CZ1 1315 aa13.68□□□□□ -0.22
TRAPPC9-212ENST00000521944 ADGRF5Q8IZF2 1346 aa13.68□□□□□ -0.22
TRAPPC9-212ENST00000521944 TMEM132EQ6IEE7 984 aa13.68□□□□□ -0.22
TRAPPC9-212ENST00000521944 KIF1BO60333 1816 aa13.68□□□□□ -0.22
TRAPPC9-212ENST00000521944 PTGER2P43116 358 aa13.67□□□□□ -0.22
TRAPPC9-212ENST00000521944 GOLGB1Q14789 3259 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-212ENST00000521944 COL14A1Q05707 1796 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-212ENST00000521944 ANO8Q9HCE9 1232 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-212ENST00000521944 PPLO60437 1756 aa13.65□□□□□ -0.22
TRAPPC9-212ENST00000521944 RRBP1Q9P2E9 1410 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-212ENST00000521944 NRKQ7Z2Y5 1582 aa13.63□□□□□ -0.23
TRAPPC9-212ENST00000521944 PMFBP1Q8TBY8 1022 aa13.63□□□□□ -0.23
TRAPPC9-212ENST00000521944 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-212ENST00000521944 SYT17Q9BSW7 474 aa13.62□□□□□ -0.23
TRAPPC9-212ENST00000521944 CASZ1Q86V15 1759 aa13.62□□□□□ -0.23
TRAPPC9-212ENST00000521944 CHD4Q14839 1912 aa13.61□□□□□ -0.23
TRAPPC9-212ENST00000521944 ZBTB7AO95365 584 aa13.61□□□□□ -0.23
TRAPPC9-212ENST00000521944 MNX1P50219 401 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-212ENST00000521944 SIRT1Q96EB6 747 aa13.61□□□□□ -0.23
TRAPPC9-212ENST00000521944 MYOM1P52179 1685 aa13.6□□□□□ -0.23
TRAPPC9-212ENST00000521944 ALS2Q96Q42 1657 aa13.6□□□□□ -0.23
TRAPPC9-212ENST00000521944 CHRNA2Q15822 529 aa13.6□□□□□ -0.23
TRAPPC9-212ENST00000521944 BARGINQ6ZT62 677 aa13.6□□□□□ -0.23
TRAPPC9-212ENST00000521944 FHDC1Q9C0D6 1143 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-212ENST00000521944 CRYBG1Q9Y4K1 1723 aa13.59□□□□□ -0.23
TRAPPC9-212ENST00000521944 YTHDC2Q9H6S0 1430 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-212ENST00000521944 HAX1O00165 279 aa13.59□□□□□ -0.23
TRAPPC9-212ENST00000521944 ITGAEP38570 1179 aa13.59□□□□□ -0.23
TRAPPC9-212ENST00000521944 PTF1AQ7RTS3 328 aa13.59□□□□□ -0.23
TRAPPC9-212ENST00000521944 SGIP1Q9BQI5 828 aa13.59□□□□□ -0.23
TRAPPC9-212ENST00000521944 PRDM11Q9NQV5 511 aa13.59□□□□□ -0.23
TRAPPC9-212ENST00000521944 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
TRAPPC9-212ENST00000521944 KNDC1Q76NI1 1749 aa13.59□□□□□ -0.23
TRAPPC9-212ENST00000521944 IFT172Q9UG01 1749 aa13.59□□□□□ -0.23
TRAPPC9-212ENST00000521944 PDE3BQ13370 1112 aa13.58□□□□□ -0.24
TRAPPC9-212ENST00000521944 KLHL34Q8N239 644 aa13.58□□□□□ -0.24
TRAPPC9-212ENST00000521944 STRN4Q9NRL3 753 aa13.58□□□□□ -0.24
TRAPPC9-212ENST00000521944 KIAA0232Q92628 1395 aa13.58□□□□□ -0.24
TRAPPC9-212ENST00000521944 PLSCR1O15162 318 aa13.56□□□□□ -0.24
TRAPPC9-212ENST00000521944 SAFB2Q14151 953 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRAPPC9-212ENST00000521944 PRR36Q9H6K5 1346 aa13.55□□□□□ -0.24
TRAPPC9-212ENST00000521944 ACIN1Q9UKV3 1341 aaKnown RBP13.55□□□□□ -0.24
TRAPPC9-212ENST00000521944 GIGYF1O75420 1035 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms