RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 CDK19Q9BWU1 502 aa30.25■■■□□ 2.43
PABPC1-218ENST00000521865 FAM98CQ17RN3 349 aaKnown RBP30.24■■■□□ 2.43
PABPC1-218ENST00000521865 PRDM11Q9NQV5 511 aa30.22■■■□□ 2.43
PABPC1-218ENST00000521865 ATP7BP35670 1465 aa30.22■■■□□ 2.43
PABPC1-218ENST00000521865 ARHGEF28Q8N1W1 1705 aaKnown RBP30.22■■■□□ 2.43
PABPC1-218ENST00000521865 ALS2Q96Q42 1657 aa30.21■■■□□ 2.43
PABPC1-218ENST00000521865 DEFB132Q7Z7B7 95 aa30.21■■■□□ 2.43
PABPC1-218ENST00000521865 NBPF1Q3BBV0 1214 aa30.17■■■□□ 2.42
PABPC1-218ENST00000521865 COL14A1Q05707 1796 aaKnown RBP30.17■■■□□ 2.42
PABPC1-218ENST00000521865 BRWD3Q6RI45 1802 aa30.17■■■□□ 2.42
PABPC1-218ENST00000521865 NUTM2GQ5VZR2 741 aa30.16■■■□□ 2.42
PABPC1-218ENST00000521865 CCDC61Q9Y6R9 512 aa30.16■■■□□ 2.42
PABPC1-218ENST00000521865 ACEP12821 1306 aa30.15■■■□□ 2.42
PABPC1-218ENST00000521865 ITSN1Q15811 1721 aa30.14■■■□□ 2.42
PABPC1-218ENST00000521865 SRCAPQ6ZRS2 3230 aa30.14■■■□□ 2.42
PABPC1-218ENST00000521865 NBPF8Q3BBV2 869 aa30.13■■■□□ 2.41
PABPC1-218ENST00000521865 SPATA31A5Q5VU36 1347 aa30.13■■■□□ 2.41
PABPC1-218ENST00000521865 SPATA31A7Q8IWB4 1347 aa30.13■■■□□ 2.41
PABPC1-218ENST00000521865 KIAA0232Q92628 1395 aa30.13■■■□□ 2.41
PABPC1-218ENST00000521865 NRAPQ86VF7 1730 aa30.13■■■□□ 2.41
PABPC1-218ENST00000521865 SRPK2P78362 688 aaKnown RBP30.12■■■□□ 2.41
PABPC1-218ENST00000521865 CHRNA2Q15822 529 aa30.12■■■□□ 2.41
PABPC1-218ENST00000521865 ZC3H6P61129 1189 aaKnown RBP30.11■■■□□ 2.41
PABPC1-218ENST00000521865 STRN4Q9NRL3 753 aa30.11■■■□□ 2.41
PABPC1-218ENST00000521865 POLR3AO14802 1390 aaPredicted RBP30.1■■■□□ 2.41
PABPC1-218ENST00000521865 PLEKHG3A1L390 1219 aa30.09■■■□□ 2.41
PABPC1-218ENST00000521865 CENPJQ9HC77 1338 aaPredicted RBP30.09■■■□□ 2.41
PABPC1-218ENST00000521865 KIAA1210Q9ULL0 1709 aa30.08■■■□□ 2.41
PABPC1-218ENST00000521865 BAG6P46379 1132 aa30.08■■■□□ 2.41
PABPC1-218ENST00000521865 ABTB2Q8N961 1025 aa30.08■■■□□ 2.41
PABPC1-218ENST00000521865 FAM182BQ5T319 152 aa30.06■■■□□ 2.4
PABPC1-218ENST00000521865 CRYBG1Q9Y4K1 1723 aa30.05■■■□□ 2.4
PABPC1-218ENST00000521865 EVA1CP58658 441 aa30.04■■■□□ 2.4
PABPC1-218ENST00000521865 CABP2Q9NPB3 220 aa30.04■■■□□ 2.4
PABPC1-218ENST00000521865 SPATA31A1Q5TZJ5 1347 aa30.02■■■□□ 2.4
PABPC1-218ENST00000521865 USP35Q9P2H5 1018 aa30.02■■■□□ 2.4
PABPC1-218ENST00000521865 PPIP5K1Q6PFW1 1433 aa30.02■■■□□ 2.4
PABPC1-218ENST00000521865 TOPAZ1Q8N9V7 1692 aa30.01■■■□□ 2.4
PABPC1-218ENST00000521865 L3MBTL2Q969R5 705 aa30■■■□□ 2.39
PABPC1-218ENST00000521865 PHRF1Q9P1Y6 1649 aaKnown RBP30■■■□□ 2.39
PABPC1-218ENST00000521865 NLRP13Q86W25 1043 aa29.99■■■□□ 2.39
PABPC1-218ENST00000521865 EN1Q05925 392 aaPredicted RBP29.97■■■□□ 2.39
PABPC1-218ENST00000521865 NEUROD1Q13562 356 aa29.95■■■□□ 2.39
PABPC1-218ENST00000521865 SIN3AQ96ST3 1273 aa29.95■■■□□ 2.39
PABPC1-218ENST00000521865 CABP1Q9NZU7 370 aa29.95■■■□□ 2.39
PABPC1-218ENST00000521865 SSH2Q76I76 1423 aa29.94■■■□□ 2.38
PABPC1-218ENST00000521865 THSD7AQ9UPZ6 1657 aa29.94■■■□□ 2.38
PABPC1-218ENST00000521865 USP19O94966 1318 aa29.94■■■□□ 2.38
PABPC1-218ENST00000521865 ZBTB7CA1YPR0 619 aa29.93■■■□□ 2.38
PABPC1-218ENST00000521865 PSDA5PKW4 1024 aaPredicted RBP29.93■■■□□ 2.38
PABPC1-218ENST00000521865 GCP02774 474 aa29.93■■■□□ 2.38
PABPC1-218ENST00000521865 CPDO75976 1380 aa29.91■■■□□ 2.38
PABPC1-218ENST00000521865 NRKQ7Z2Y5 1582 aa29.91■■■□□ 2.38
PABPC1-218ENST00000521865 LARP1Q6PKG0 1096 aaKnown RBP29.91■■■□□ 2.38
PABPC1-218ENST00000521865 FAM196AQ6ZSG2 479 aa29.91■■■□□ 2.38
PABPC1-218ENST00000521865 PDE3BQ13370 1112 aa29.9■■■□□ 2.38
PABPC1-218ENST00000521865 EVC2Q86UK5 1308 aa29.9■■■□□ 2.38
PABPC1-218ENST00000521865 BRD4O60885 1362 aaPredicted RBP29.9■■■□□ 2.38
PABPC1-218ENST00000521865 NLRP6P59044 892 aa29.89■■■□□ 2.38
PABPC1-218ENST00000521865 BARGINQ6ZT62 677 aa29.89■■■□□ 2.38
PABPC1-218ENST00000521865 QRICH2Q9H0J4 1663 aa29.88■■■□□ 2.37
PABPC1-218ENST00000521865 TRIM37O94972 964 aa29.88■■■□□ 2.37
PABPC1-218ENST00000521865 TCP11L2Q8N4U5 519 aa29.88■■■□□ 2.37
PABPC1-218ENST00000521865 ROCK2O75116 1388 aaKnown RBP29.88■■■□□ 2.37
PABPC1-218ENST00000521865 CAMTA1Q9Y6Y1 1673 aa29.87■■■□□ 2.37
PABPC1-218ENST00000521865 RGPD1P0DJD0 1748 aa29.86■■■□□ 2.37
PABPC1-218ENST00000521865 USP6P35125 1406 aa29.86■■■□□ 2.37
PABPC1-218ENST00000521865 EZH2Q15910 746 aaKnown RBP29.84■■■□□ 2.37
PABPC1-218ENST00000521865 APBA3O96018 575 aa29.82■■■□□ 2.36
PABPC1-218ENST00000521865 THRAP3Q9Y2W1 955 aaKnown RBP29.82■■■□□ 2.36
PABPC1-218ENST00000521865 DISP2A7MBM2 1401 aa29.81■■■□□ 2.36
PABPC1-218ENST00000521865 R3HDM1Q15032 1099 aaKnown RBP29.81■■■□□ 2.36
PABPC1-218ENST00000521865 LMO7Q8WWI1 1683 aa29.79■■■□□ 2.36
PABPC1-218ENST00000521865 COL5A2P05997 1499 aaPredicted RBP29.78■■■□□ 2.36
PABPC1-218ENST00000521865 TRPM1Q7Z4N2 1603 aa29.78■■■□□ 2.36
PABPC1-218ENST00000521865 CAMKK2Q96RR4 588 aa29.76■■■□□ 2.35
PABPC1-218ENST00000521865 ZNF692Q9BU19 519 aaPredicted RBP29.76■■■□□ 2.35
PABPC1-218ENST00000521865 CRB1P82279 1406 aa29.75■■■□□ 2.35
PABPC1-218ENST00000521865 TNS1Q9HBL0 1735 aaKnown RBP29.75■■■□□ 2.35
PABPC1-218ENST00000521865 AATKQ6ZMQ8 1374 aa29.75■■■□□ 2.35
PABPC1-218ENST00000521865 SOX12O15370 315 aa29.74■■■□□ 2.35
PABPC1-218ENST00000521865 TOM1L2Q6ZVM7 507 aa29.74■■■□□ 2.35
PABPC1-218ENST00000521865 TTC21BQ7Z4L5 1316 aa29.72■■■□□ 2.35
PABPC1-218ENST00000521865 SLIT3O75094 1523 aa29.72■■■□□ 2.35
PABPC1-218ENST00000521865 LRP5O75197 1615 aa29.71■■■□□ 2.35
PABPC1-218ENST00000521865 PARD3Q8TEW0 1356 aa29.71■■■□□ 2.35
PABPC1-218ENST00000521865 KCNH5Q8NCM2 988 aa29.7■■■□□ 2.35
PABPC1-218ENST00000521865 TTC21AQ8NDW8 1320 aa29.68■■■□□ 2.34
PABPC1-218ENST00000521865 KTN1Q86UP2 1357 aaKnown RBP29.67■■■□□ 2.34
PABPC1-218ENST00000521865 PIK3C2AO00443 1686 aa29.67■■■□□ 2.34
PABPC1-218ENST00000521865 C11orf95C9JLR9 678 aaPredicted RBP29.67■■■□□ 2.34
PABPC1-218ENST00000521865 CSB-PGBD3P0DP91 1061 aa29.67■■■□□ 2.34
PABPC1-218ENST00000521865 CARD11Q9BXL7 1154 aa29.67■■■□□ 2.34
PABPC1-218ENST00000521865 AXIN2Q9Y2T1 843 aa29.67■■■□□ 2.34
PABPC1-218ENST00000521865 DDB1Q16531 1140 aa29.66■■■□□ 2.34
PABPC1-218ENST00000521865 CPSF1Q10570 1443 aaKnown RBP29.65■■■□□ 2.34
PABPC1-218ENST00000521865 NBPF14Q5TI25 921 aa29.65■■■□□ 2.34
PABPC1-218ENST00000521865 ARHGEF25Q86VW2 580 aa29.65■■■□□ 2.34
PABPC1-218ENST00000521865 WDR17Q8IZU2 1322 aa29.65■■■□□ 2.34
PABPC1-218ENST00000521865 OVOS2A0A0G2JMS6 1433 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms