RNA–Protein interactions for RNA: ENST00000521715.5

LINC00293-204, long intergenic non-protein coding RNA 293, humanhuman

TSL 1 (best) BASIC

Gene LINC00293, Length 1,498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00293-204ENST00000521715 PNMA2Q9UL42 364 aa9.6□□□□□ -0.87
LINC00293-204ENST00000521715 PTMAP06454 111 aaKnown RBP9.59□□□□□ -0.87
LINC00293-204ENST00000521715 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
LINC00293-204ENST00000521715 FBXO31Q5XUX0 539 aaPredicted RBP9.59□□□□□ -0.87
LINC00293-204ENST00000521715 PHLDB3Q6NSJ2 640 aa9.59□□□□□ -0.87
LINC00293-204ENST00000521715 DHX38Q92620 1227 aaKnown RBP9.59□□□□□ -0.87
LINC00293-204ENST00000521715 CLEC4GQ6UXB4 293 aa9.59□□□□□ -0.87
LINC00293-204ENST00000521715 ZCRB1Q8TBF4 217 aaKnown RBP9.59□□□□□ -0.87
LINC00293-204ENST00000521715 RPS6KL1Q9Y6S9 549 aa9.59□□□□□ -0.87
LINC00293-204ENST00000521715 ABCC9O60706 1549 aa9.58□□□□□ -0.88
LINC00293-204ENST00000521715 FOXK1P85037 733 aa9.58□□□□□ -0.88
LINC00293-204ENST00000521715 TAGLNQ01995 201 aaKnown RBP9.58□□□□□ -0.88
LINC00293-204ENST00000521715 FBXO33Q7Z6M2 555 aa9.58□□□□□ -0.88
LINC00293-204ENST00000521715 CCAR1Q8IX12 1150 aaKnown RBP9.58□□□□□ -0.88
LINC00293-204ENST00000521715 GPCPD1Q9NPB8 672 aa9.58□□□□□ -0.88
LINC00293-204ENST00000521715 HDLBPQ00341 1268 aaKnown RBP9.57□□□□□ -0.88
LINC00293-204ENST00000521715 TCEAL1Q15170 157 aa9.57□□□□□ -0.88
LINC00293-204ENST00000521715 C4orf46Q504U0 113 aa9.57□□□□□ -0.88
LINC00293-204ENST00000521715 TSHZ1Q6ZSZ6 1077 aa9.57□□□□□ -0.88
LINC00293-204ENST00000521715 PPARGC1BQ86YN6 1023 aaKnown RBP9.57□□□□□ -0.88
LINC00293-204ENST00000521715 PLPP6Q8IY26 295 aa9.57□□□□□ -0.88
LINC00293-204ENST00000521715 CCDC146Q8IYE0 955 aa9.57□□□□□ -0.88
LINC00293-204ENST00000521715 PIF1Q9H611 641 aa9.57□□□□□ -0.88
LINC00293-204ENST00000521715 PPP1R15BQ5SWA1 713 aa9.56□□□□□ -0.88
LINC00293-204ENST00000521715 PPP2R2DQ66LE6 453 aa9.56□□□□□ -0.88
LINC00293-204ENST00000521715 PRKAG2Q9UGJ0 569 aa9.56□□□□□ -0.88
LINC00293-204ENST00000521715 HOXB3P14651 431 aaPredicted RBP9.55□□□□□ -0.88
LINC00293-204ENST00000521715 TFIP11Q9UBB9 837 aaKnown RBP9.55□□□□□ -0.88
LINC00293-204ENST00000521715 ATP2B1P20020 1258 aa9.54□□□□□ -0.88
LINC00293-204ENST00000521715 GTF2F1P35269 517 aaKnown RBP eCLIP9.54□□□□□ -0.88
LINC00293-204ENST00000521715 C9orf131Q5VYM1 1079 aa9.54□□□□□ -0.88
LINC00293-204ENST00000521715 BIN2Q9UBW5 565 aaPredicted RBP9.54□□□□□ -0.88
LINC00293-204ENST00000521715 MDM2Q00987 491 aaPredicted RBP9.53□□□□□ -0.88
LINC00293-204ENST00000521715 PLEKHG6Q3KR16 790 aa9.53□□□□□ -0.88
LINC00293-204ENST00000521715 WDR78Q5VTH9 848 aa9.53□□□□□ -0.88
LINC00293-204ENST00000521715 TINF2Q9BSI4 451 aa9.53□□□□□ -0.88
LINC00293-204ENST00000521715 IQSEC3Q9UPP2 1182 aaPredicted RBP9.53□□□□□ -0.88
LINC00293-204ENST00000521715 GRXCR2A6NFK2 248 aa9.53□□□□□ -0.88
LINC00293-204ENST00000521715 SCAMP3O14828 347 aaKnown RBP9.53□□□□□ -0.88
LINC00293-204ENST00000521715 RAD51AP2Q09MP3 1159 aa9.53□□□□□ -0.88
LINC00293-204ENST00000521715 WASHC4Q2M389 1173 aa9.53□□□□□ -0.88
LINC00293-204ENST00000521715 RNF187Q5TA31 235 aaPredicted RBP9.53□□□□□ -0.88
LINC00293-204ENST00000521715 PNISRQ8TF01 805 aaKnown RBP9.53□□□□□ -0.88
LINC00293-204ENST00000521715 BACH2Q9BYV9 841 aa9.53□□□□□ -0.88
LINC00293-204ENST00000521715 COL4A3BPQ9Y5P4 624 aa9.53□□□□□ -0.88
LINC00293-204ENST00000521715 CLSPNQ9HAW4 1339 aa9.52□□□□□ -0.88
LINC00293-204ENST00000521715 CCER2I3L3R5 266 aa9.52□□□□□ -0.89
LINC00293-204ENST00000521715 TMEM164Q5U3C3 297 aa9.52□□□□□ -0.89
LINC00293-204ENST00000521715 ARMC5Q96C12 935 aa9.52□□□□□ -0.89
LINC00293-204ENST00000521715 UCN2Q96RP3 112 aa9.52□□□□□ -0.89
LINC00293-204ENST00000521715 IRF2BPLQ9H1B7 796 aa9.52□□□□□ -0.89
LINC00293-204ENST00000521715 EMILIN3Q9NT22 766 aa9.52□□□□□ -0.89
LINC00293-204ENST00000521715 GNL3LQ9NVN8 582 aaKnown RBP9.52□□□□□ -0.89
LINC00293-204ENST00000521715 COMMD10Q9Y6G5 202 aa9.52□□□□□ -0.89
LINC00293-204ENST00000521715 EXOC5O00471 708 aa9.51□□□□□ -0.89
LINC00293-204ENST00000521715 HOXA2O43364 376 aa9.51□□□□□ -0.89
LINC00293-204ENST00000521715 SERPINB4P48594 390 aa9.51□□□□□ -0.89
LINC00293-204ENST00000521715 RHBDL3P58872 404 aa9.51□□□□□ -0.89
LINC00293-204ENST00000521715 RBM10P98175 930 aaKnown RBP9.51□□□□□ -0.89
LINC00293-204ENST00000521715 MYBPC2Q14324 1141 aa9.51□□□□□ -0.89
LINC00293-204ENST00000521715 FAM163AQ96GL9 167 aaPredicted RBP9.51□□□□□ -0.89
LINC00293-204ENST00000521715 ZSWIM4Q9H7M6 989 aa9.51□□□□□ -0.89
LINC00293-204ENST00000521715 WDHD1O75717 1129 aaPredicted RBP9.5□□□□□ -0.89
LINC00293-204ENST00000521715 KIF4AO95239 1232 aa9.5□□□□□ -0.89
LINC00293-204ENST00000521715 LIG1P18858 919 aa9.5□□□□□ -0.89
LINC00293-204ENST00000521715 SSFA2P28290 1259 aa9.49□□□□□ -0.89
LINC00293-204ENST00000521715 TBX4P57082 545 aa9.49□□□□□ -0.89
LINC00293-204ENST00000521715 BIRC2Q13490 618 aa9.49□□□□□ -0.89
LINC00293-204ENST00000521715 C11orf96Q7Z7L8 435 aa9.49□□□□□ -0.89
LINC00293-204ENST00000521715 SLC43A3Q8NBI5 491 aa9.49□□□□□ -0.89
LINC00293-204ENST00000521715 PMFBP1Q8TBY8 1022 aa9.49□□□□□ -0.89
LINC00293-204ENST00000521715 SECISBP2LQ93073 1101 aaKnown RBP9.49□□□□□ -0.89
LINC00293-204ENST00000521715 G3BP2Q9UN86 482 aaKnown RBP9.49□□□□□ -0.89
LINC00293-204ENST00000521715 MAFBQ9Y5Q3 323 aaPredicted RBP9.49□□□□□ -0.89
LINC00293-204ENST00000521715 ELOAQ14241 798 aaKnown RBP9.48□□□□□ -0.89
LINC00293-204ENST00000521715 JAZF1Q86VZ6 243 aa9.48□□□□□ -0.89
LINC00293-204ENST00000521715 TRIM34Q9BYJ4 488 aa9.48□□□□□ -0.89
LINC00293-204ENST00000521715 ALG2Q9H553 416 aa9.48□□□□□ -0.89
LINC00293-204ENST00000521715 NLRP2Q9NX02 1062 aa9.48□□□□□ -0.89
LINC00293-204ENST00000521715 ZMIZ1Q9ULJ6 1067 aa9.48□□□□□ -0.89
LINC00293-204ENST00000521715 SNPHO15079 494 aa9.47□□□□□ -0.89
LINC00293-204ENST00000521715 DOK7Q18PE1 504 aa9.47□□□□□ -0.89
LINC00293-204ENST00000521715 STK32AQ8WU08 396 aa9.47□□□□□ -0.89
LINC00293-204ENST00000521715 UPF1Q92900 1129 aaKnown RBP eCLIP9.47□□□□□ -0.89
LINC00293-204ENST00000521715 PCDH12Q9NPG4 1184 aa9.47□□□□□ -0.89
LINC00293-204ENST00000521715 PRR12Q9ULL5 1215 aa9.47□□□□□ -0.89
LINC00293-204ENST00000521715 ST18O60284 1047 aa9.47□□□□□ -0.89
LINC00293-204ENST00000521715 HSD3B2P26439 372 aa9.47□□□□□ -0.89
LINC00293-204ENST00000521715 LCE2DQ5TA82 110 aaPredicted RBP9.47□□□□□ -0.89
LINC00293-204ENST00000521715 ZNF746Q6NUN9 644 aaPredicted RBP9.47□□□□□ -0.89
LINC00293-204ENST00000521715 KHSRPQ92945 711 aaKnown RBP eCLIP9.47□□□□□ -0.89
LINC00293-204ENST00000521715 RPS6KC1Q96S38 1066 aa9.47□□□□□ -0.89
LINC00293-204ENST00000521715 JADE2Q9NQC1 790 aa9.47□□□□□ -0.89
LINC00293-204ENST00000521715 S100BP04271 92 aaPredicted RBP9.46□□□□□ -0.9
LINC00293-204ENST00000521715 OSBPP22059 807 aa9.46□□□□□ -0.9
LINC00293-204ENST00000521715 RINLQ6ZS11 566 aa9.46□□□□□ -0.9
LINC00293-204ENST00000521715 ZNF710Q8N1W2 664 aa9.46□□□□□ -0.9
LINC00293-204ENST00000521715 SENP7Q9BQF6 1050 aa9.46□□□□□ -0.9
LINC00293-204ENST00000521715 FAM217BQ9NTX9 383 aaPredicted RBP9.46□□□□□ -0.9
LINC00293-204ENST00000521715 BSDC1Q9NW68 430 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms