RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 PLCH1Q4KWH8 1693 aa12.51□□□□□ -0.41
SPARC-204ENST00000521569 ALS2Q96Q42 1657 aa12.51□□□□□ -0.41
SPARC-204ENST00000521569 BARGINQ6ZT62 677 aa12.5□□□□□ -0.41
SPARC-204ENST00000521569 NUDT16Q96DE0 195 aaKnown RBP12.5□□□□□ -0.41
SPARC-204ENST00000521569 SPATA31A1Q5TZJ5 1347 aa12.5□□□□□ -0.41
SPARC-204ENST00000521569 MINK1Q8N4C8 1332 aaPredicted RBP12.5□□□□□ -0.41
SPARC-204ENST00000521569 PARD3Q8TEW0 1356 aa12.5□□□□□ -0.41
SPARC-204ENST00000521569 ATP7BP35670 1465 aa12.5□□□□□ -0.41
SPARC-204ENST00000521569 ABCA3Q99758 1704 aa12.5□□□□□ -0.41
SPARC-204ENST00000521569 COL14A1Q05707 1796 aaKnown RBP12.5□□□□□ -0.41
SPARC-204ENST00000521569 NRAPQ86VF7 1730 aa12.49□□□□□ -0.41
SPARC-204ENST00000521569 FAM196AQ6ZSG2 479 aa12.49□□□□□ -0.41
SPARC-204ENST00000521569 PRDM11Q9NQV5 511 aa12.49□□□□□ -0.41
SPARC-204ENST00000521569 CCDC61Q9Y6R9 512 aa12.49□□□□□ -0.41
SPARC-204ENST00000521569 BRWD3Q6RI45 1802 aa12.48□□□□□ -0.41
SPARC-204ENST00000521569 BRD4O60885 1362 aaPredicted RBP12.48□□□□□ -0.41
SPARC-204ENST00000521569 CPDO75976 1380 aa12.48□□□□□ -0.41
SPARC-204ENST00000521569 CAMKK2Q96RR4 588 aa12.48□□□□□ -0.41
SPARC-204ENST00000521569 RGPD8O14715 1765 aaPredicted RBP12.48□□□□□ -0.41
SPARC-204ENST00000521569 C11orf95C9JLR9 678 aaPredicted RBP12.47□□□□□ -0.41
SPARC-204ENST00000521569 NBPF8Q3BBV2 869 aa12.47□□□□□ -0.41
SPARC-204ENST00000521569 KDM2AQ9Y2K7 1162 aa12.47□□□□□ -0.41
SPARC-204ENST00000521569 THSD7AQ9UPZ6 1657 aa12.47□□□□□ -0.41
SPARC-204ENST00000521569 KIAA0232Q92628 1395 aa12.46□□□□□ -0.41
SPARC-204ENST00000521569 EN1Q05925 392 aaPredicted RBP12.46□□□□□ -0.41
SPARC-204ENST00000521569 CDK19Q9BWU1 502 aa12.46□□□□□ -0.41
SPARC-204ENST00000521569 THRAP3Q9Y2W1 955 aaKnown RBP12.46□□□□□ -0.41
SPARC-204ENST00000521569 USP19O94966 1318 aa12.45□□□□□ -0.42
SPARC-204ENST00000521569 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
SPARC-204ENST00000521569 A0A0G2JS52 829 aa12.44□□□□□ -0.42
SPARC-204ENST00000521569 MYT1Q01538 1121 aa12.44□□□□□ -0.42
SPARC-204ENST00000521569 ACEP12821 1306 aa12.43□□□□□ -0.42
SPARC-204ENST00000521569 CRYBG1Q9Y4K1 1723 aa12.43□□□□□ -0.42
SPARC-204ENST00000521569 TCP11L2Q8N4U5 519 aa12.42□□□□□ -0.42
SPARC-204ENST00000521569 SSH2Q76I76 1423 aa12.42□□□□□ -0.42
SPARC-204ENST00000521569 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
SPARC-204ENST00000521569 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
SPARC-204ENST00000521569 EZH2Q15910 746 aaKnown RBP12.41□□□□□ -0.42
SPARC-204ENST00000521569 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.42
SPARC-204ENST00000521569 GCP02774 474 aa12.4□□□□□ -0.42
SPARC-204ENST00000521569 ZC3H6P61129 1189 aaKnown RBP12.4□□□□□ -0.42
SPARC-204ENST00000521569 R3HDM1Q15032 1099 aaKnown RBP12.4□□□□□ -0.42
SPARC-204ENST00000521569 CHRNA2Q15822 529 aa12.4□□□□□ -0.42
SPARC-204ENST00000521569 FAM182BQ5T319 152 aa12.4□□□□□ -0.42
SPARC-204ENST00000521569 NLRP13Q86W25 1043 aa12.4□□□□□ -0.42
SPARC-204ENST00000521569 ABTB2Q8N961 1025 aa12.4□□□□□ -0.42
SPARC-204ENST00000521569 TRIM37O94972 964 aa12.39□□□□□ -0.43
SPARC-204ENST00000521569 EVA1CP58658 441 aa12.39□□□□□ -0.43
SPARC-204ENST00000521569 PDE3BQ13370 1112 aa12.39□□□□□ -0.43
SPARC-204ENST00000521569 CAMTA1Q9Y6Y1 1673 aa12.38□□□□□ -0.43
SPARC-204ENST00000521569 BCL9O00512 1426 aa12.38□□□□□ -0.43
SPARC-204ENST00000521569 ITSN1Q15811 1721 aa12.38□□□□□ -0.43
SPARC-204ENST00000521569 ARHGEF28Q8N1W1 1705 aaKnown RBP12.38□□□□□ -0.43
SPARC-204ENST00000521569 APBA3O96018 575 aa12.38□□□□□ -0.43
SPARC-204ENST00000521569 LARP1Q6PKG0 1096 aaKnown RBP12.38□□□□□ -0.43
SPARC-204ENST00000521569 STRN4Q9NRL3 753 aa12.38□□□□□ -0.43
SPARC-204ENST00000521569 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
SPARC-204ENST00000521569 KIAA1210Q9ULL0 1709 aa12.37□□□□□ -0.43
SPARC-204ENST00000521569 PLSCR1O15162 318 aa12.37□□□□□ -0.43
SPARC-204ENST00000521569 NBPF1Q3BBV0 1214 aa12.37□□□□□ -0.43
SPARC-204ENST00000521569 CENPJQ9HC77 1338 aaPredicted RBP12.37□□□□□ -0.43
SPARC-204ENST00000521569 TOPAZ1Q8N9V7 1692 aa12.36□□□□□ -0.43
SPARC-204ENST00000521569 LMO7Q8WWI1 1683 aa12.36□□□□□ -0.43
SPARC-204ENST00000521569 NBPF14Q5TI25 921 aa12.36□□□□□ -0.43
SPARC-204ENST00000521569 TNS1Q9HBL0 1735 aaKnown RBP12.36□□□□□ -0.43
SPARC-204ENST00000521569 COL5A2P05997 1499 aaPredicted RBP12.35□□□□□ -0.43
SPARC-204ENST00000521569 NUTM2GQ5VZR2 741 aa12.35□□□□□ -0.43
SPARC-204ENST00000521569 PHRF1Q9P1Y6 1649 aaKnown RBP12.35□□□□□ -0.43
SPARC-204ENST00000521569 CRB1P82279 1406 aa12.35□□□□□ -0.43
SPARC-204ENST00000521569 PPIP5K1Q6PFW1 1433 aa12.35□□□□□ -0.43
SPARC-204ENST00000521569 NRKQ7Z2Y5 1582 aa12.35□□□□□ -0.43
SPARC-204ENST00000521569 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
SPARC-204ENST00000521569 USP6P35125 1406 aa12.34□□□□□ -0.43
SPARC-204ENST00000521569 SRPK2P78362 688 aaKnown RBP12.33□□□□□ -0.44
SPARC-204ENST00000521569 ZNF692Q9BU19 519 aaPredicted RBP12.33□□□□□ -0.44
SPARC-204ENST00000521569 CABP1Q9NZU7 370 aa12.33□□□□□ -0.44
SPARC-204ENST00000521569 USP35Q9P2H5 1018 aa12.33□□□□□ -0.44
SPARC-204ENST00000521569 SLIT3O75094 1523 aa12.32□□□□□ -0.44
SPARC-204ENST00000521569 OVOS2A0A0G2JMS6 1433 aa12.31□□□□□ -0.44
SPARC-204ENST00000521569 OVOS2A0A0J9YW53 1432 aa12.31□□□□□ -0.44
SPARC-204ENST00000521569 OVOS2Q6IE36 1432 aa12.31□□□□□ -0.44
SPARC-204ENST00000521569 NLRP6P59044 892 aa12.31□□□□□ -0.44
SPARC-204ENST00000521569 ARHGEF25Q86VW2 580 aa12.31□□□□□ -0.44
SPARC-204ENST00000521569 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
SPARC-204ENST00000521569 CABP2Q9NPB3 220 aa12.31□□□□□ -0.44
SPARC-204ENST00000521569 KCNQ2O43526 872 aa12.3□□□□□ -0.44
SPARC-204ENST00000521569 KCNH5Q8NCM2 988 aa12.3□□□□□ -0.44
SPARC-204ENST00000521569 SPON1Q9HCB6 807 aa12.3□□□□□ -0.44
SPARC-204ENST00000521569 EVC2Q86UK5 1308 aa12.3□□□□□ -0.44
SPARC-204ENST00000521569 WDR17Q8IZU2 1322 aa12.3□□□□□ -0.44
SPARC-204ENST00000521569 NINLQ9Y2I6 1382 aa12.3□□□□□ -0.44
SPARC-204ENST00000521569 DDB1Q16531 1140 aa12.29□□□□□ -0.44
SPARC-204ENST00000521569 CARD10Q9BWT7 1032 aa12.29□□□□□ -0.44
SPARC-204ENST00000521569 TTC21AQ8NDW8 1320 aa12.29□□□□□ -0.44
SPARC-204ENST00000521569 RREB1Q92766 1687 aa12.29□□□□□ -0.44
SPARC-204ENST00000521569 PARP4Q9UKK3 1724 aaKnown RBP12.28□□□□□ -0.44
SPARC-204ENST00000521569 AXIN2Q9Y2T1 843 aa12.28□□□□□ -0.44
SPARC-204ENST00000521569 CPSF1Q10570 1443 aaKnown RBP12.28□□□□□ -0.44
SPARC-204ENST00000521569 PROM2Q8N271 834 aa12.27□□□□□ -0.45
SPARC-204ENST00000521569 L3MBTL2Q969R5 705 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms