RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 PPP2R2DQ66LE6 453 aa7.19□□□□□ -1.26
VPS13B-209ENST00000521559 IL27Q8NEV9 243 aa7.19□□□□□ -1.26
VPS13B-209ENST00000521559 MRGPRX2Q96LB1 330 aa7.19□□□□□ -1.26
VPS13B-209ENST00000521559 F12P00748 615 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-209ENST00000521559 SKOR1P84550 965 aa7.18□□□□□ -1.26
VPS13B-209ENST00000521559 PROCA1Q8NCQ7 364 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-209ENST00000521559 EHBP1Q8NDI1 1231 aa7.18□□□□□ -1.26
VPS13B-209ENST00000521559 BAP1Q92560 729 aa7.18□□□□□ -1.26
VPS13B-209ENST00000521559 SH3BP2P78314 561 aa7.17□□□□□ -1.26
VPS13B-209ENST00000521559 ZNF511Q8NB15 262 aa7.17□□□□□ -1.26
VPS13B-209ENST00000521559 PER1O15534 1290 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-209ENST00000521559 VARSP26640 1264 aaKnown RBP7.16□□□□□ -1.26
VPS13B-209ENST00000521559 CTC1Q2NKJ3 1217 aa7.15□□□□□ -1.26
VPS13B-209ENST00000521559 LINC01559Q495D7 138 aa7.15□□□□□ -1.26
VPS13B-209ENST00000521559 NBPF14Q5TI25 921 aa7.15□□□□□ -1.26
VPS13B-209ENST00000521559 MAP10Q9P2G4 905 aa7.15□□□□□ -1.26
VPS13B-209ENST00000521559 AP1G2O75843 785 aa7.14□□□□□ -1.27
VPS13B-209ENST00000521559 MYT1Q01538 1121 aa7.14□□□□□ -1.27
VPS13B-209ENST00000521559 CTDSPL2Q05D32 466 aa7.14□□□□□ -1.27
VPS13B-209ENST00000521559 AGERQ15109 404 aa7.14□□□□□ -1.27
VPS13B-209ENST00000521559 TMEM259Q4ZIN3 620 aa7.14□□□□□ -1.27
VPS13B-209ENST00000521559 PNMA1Q8ND90 353 aa7.14□□□□□ -1.27
VPS13B-209ENST00000521559 GPKOWQ92917 476 aaPredicted RBP eCLIP7.14□□□□□ -1.27
VPS13B-209ENST00000521559 AVPP01185 164 aa7.13□□□□□ -1.27
VPS13B-209ENST00000521559 BPHLQ86WA6 291 aaPredicted RBP7.13□□□□□ -1.27
VPS13B-209ENST00000521559 FAM174AQ8TBP5 190 aa7.13□□□□□ -1.27
VPS13B-209ENST00000521559 SIAH2O43255 324 aa7.12□□□□□ -1.27
VPS13B-209ENST00000521559 ALDH1A1P00352 501 aa7.12□□□□□ -1.27
VPS13B-209ENST00000521559 SMPD1P17405 629 aa7.12□□□□□ -1.27
VPS13B-209ENST00000521559 RFC5P40937 340 aa7.12□□□□□ -1.27
VPS13B-209ENST00000521559 CRIPAKQ8N1N5 446 aa7.12□□□□□ -1.27
VPS13B-209ENST00000521559 MPNDQ8N594 471 aa7.12□□□□□ -1.27
VPS13B-209ENST00000521559 WASF2Q9Y6W5 498 aa7.12□□□□□ -1.27
VPS13B-209ENST00000521559 J3QL48 77 aa7.11□□□□□ -1.27
VPS13B-209ENST00000521559 AXIN1O15169 862 aa7.11□□□□□ -1.27
VPS13B-209ENST00000521559 SMCPP49901 116 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-209ENST00000521559 NISCHQ9Y2I1 1504 aa7.11□□□□□ -1.27
VPS13B-209ENST00000521559 ZC3H4Q9UPT8 1303 aaKnown RBP7.1□□□□□ -1.27
VPS13B-209ENST00000521559 LCE2BO14633 110 aa7.1□□□□□ -1.27
VPS13B-209ENST00000521559 AAASQ9NRG9 546 aa7.1□□□□□ -1.27
VPS13B-209ENST00000521559 LRRN4Q8WUT4 740 aa7.09□□□□□ -1.27
VPS13B-209ENST00000521559 FKBPLQ9UIM3 349 aa7.09□□□□□ -1.27
VPS13B-209ENST00000521559 USP17L8P0C7I0 530 aa7.08□□□□□ -1.28
VPS13B-209ENST00000521559 PRKCSHP14314 528 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-209ENST00000521559 FBXO31Q5XUX0 539 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-209ENST00000521559 ZNF787Q6DD87 383 aa7.08□□□□□ -1.28
VPS13B-209ENST00000521559 PDXDC2PQ6P474 469 aa7.08□□□□□ -1.28
VPS13B-209ENST00000521559 FOXJ1Q92949 421 aa7.08□□□□□ -1.28
VPS13B-209ENST00000521559 ST8SIA5O15466 376 aa7.06□□□□□ -1.28
VPS13B-209ENST00000521559 PTK2Q05397 1052 aa7.06□□□□□ -1.28
VPS13B-209ENST00000521559 NR6A1Q15406 480 aa7.06□□□□□ -1.28
VPS13B-209ENST00000521559 SH3BP5LQ7L8J4 393 aa7.06□□□□□ -1.28
VPS13B-209ENST00000521559 BANK1Q8NDB2 785 aa7.06□□□□□ -1.28
VPS13B-209ENST00000521559 HPS1Q92902 700 aa7.06□□□□□ -1.28
VPS13B-209ENST00000521559 CDK15Q96Q40 435 aa7.06□□□□□ -1.28
VPS13B-209ENST00000521559 GPSM3Q9Y4H4 160 aa7.06□□□□□ -1.28
VPS13B-209ENST00000521559 MAGEB6P1A0A0J9YX57 407 aa7.05□□□□□ -1.28
VPS13B-209ENST00000521559 APBB1O00213 710 aa7.05□□□□□ -1.28
VPS13B-209ENST00000521559 ADH1CP00326 375 aa7.05□□□□□ -1.28
VPS13B-209ENST00000521559 ARID5BQ14865 1188 aa7.05□□□□□ -1.28
VPS13B-209ENST00000521559 SH3RF1Q7Z6J0 888 aa7.05□□□□□ -1.28
VPS13B-209ENST00000521559 ARHGAP9Q9BRR9 750 aa7.05□□□□□ -1.28
VPS13B-209ENST00000521559 CDV3Q9UKY7 258 aaKnown RBP7.05□□□□□ -1.28
VPS13B-209ENST00000521559 TLL2Q9Y6L7 1015 aa7.05□□□□□ -1.28
VPS13B-209ENST00000521559 NR5A1Q13285 461 aa7.04□□□□□ -1.28
VPS13B-209ENST00000521559 ZBTB33Q86T24 672 aa7.04□□□□□ -1.28
VPS13B-209ENST00000521559 TRMT44Q8IYL2 757 aaKnown RBP7.04□□□□□ -1.28
VPS13B-209ENST00000521559 C1QTNF2Q9BXJ5 285 aa7.04□□□□□ -1.28
VPS13B-209ENST00000521559 NNTQ13423 1086 aa7.03□□□□□ -1.28
VPS13B-209ENST00000521559 C4orf48Q5BLP8 95 aa7.03□□□□□ -1.28
VPS13B-209ENST00000521559 SENP2Q9HC62 589 aa7.03□□□□□ -1.28
VPS13B-209ENST00000521559 MAP4K5Q9Y4K4 846 aa7.03□□□□□ -1.28
VPS13B-209ENST00000521559 SOCS7O14512 581 aa7.02□□□□□ -1.29
VPS13B-209ENST00000521559 CAPN5O15484 640 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-209ENST00000521559 VASH1Q7L8A9 365 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-209ENST00000521559 CARD14Q9BXL6 1004 aa7.02□□□□□ -1.29
VPS13B-209ENST00000521559 ERFEQ4G0M1 354 aa7.01□□□□□ -1.29
VPS13B-209ENST00000521559 KIFC2Q96AC6 838 aa7.01□□□□□ -1.29
VPS13B-209ENST00000521559 SLC10A4Q96EP9 437 aa7.01□□□□□ -1.29
VPS13B-209ENST00000521559 HMX1Q9NP08 348 aaPredicted RBP7.01□□□□□ -1.29
VPS13B-209ENST00000521559 ATP13A2Q9NQ11 1180 aa7.01□□□□□ -1.29
VPS13B-209ENST00000521559 PRM3Q9NNZ6 103 aa7□□□□□ -1.29
VPS13B-209ENST00000521559 C11orf95C9JLR9 678 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-209ENST00000521559 GRM5P41594 1212 aa6.99□□□□□ -1.29
VPS13B-209ENST00000521559 WDR4P57081 412 aaKnown RBP6.99□□□□□ -1.29
VPS13B-209ENST00000521559 EPS8L1Q8TE68 723 aa6.99□□□□□ -1.29
VPS13B-209ENST00000521559 ZNF592Q92610 1267 aa6.99□□□□□ -1.29
VPS13B-209ENST00000521559 TRIM52Q96A61 297 aa6.99□□□□□ -1.29
VPS13B-209ENST00000521559 DACH1Q9UI36 760 aa6.99□□□□□ -1.29
VPS13B-209ENST00000521559 DHX9Q08211 1270 aaKnown RBP6.98□□□□□ -1.29
VPS13B-209ENST00000521559 ADAM32Q8TC27 787 aa6.98□□□□□ -1.29
VPS13B-209ENST00000521559 TRIM34Q9BYJ4 488 aa6.98□□□□□ -1.29
VPS13B-209ENST00000521559 GMPR2Q9P2T1 348 aaKnown RBP6.98□□□□□ -1.29
VPS13B-209ENST00000521559 FSHRP23945 695 aa6.97□□□□□ -1.29
VPS13B-209ENST00000521559 SCARF1Q14162 830 aa6.97□□□□□ -1.29
VPS13B-209ENST00000521559 NBPF20Q3BBV1 942 aa6.97□□□□□ -1.29
VPS13B-209ENST00000521559 DZIP3Q86Y13 1208 aaKnown RBP6.97□□□□□ -1.29
VPS13B-209ENST00000521559 ZNF330Q9Y3S2 320 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-209ENST00000521559 EMILIN1Q9Y6C2 1016 aa6.97□□□□□ -1.29
VPS13B-209ENST00000521559 ZBBXA8MT70 800 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms