RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	FAM135B	Q49AJ0	1406 aa		7.86	□□□□□ -1.15
CDH17-205	ENST00000521491	ROBO1	Q9Y6N7	1651 aa		7.86	□□□□□ -1.15
CDH17-205	ENST00000521491	FOXK1	P85037	733 aa		7.86	□□□□□ -1.15
CDH17-205	ENST00000521491	CAMK2B	Q13554	666 aa		7.86	□□□□□ -1.15
CDH17-205	ENST00000521491	CLTCL1	P53675	1640 aa		7.85	□□□□□ -1.15
CDH17-205	ENST00000521491	CLSPN	Q9HAW4	1339 aa		7.85	□□□□□ -1.15
CDH17-205	ENST00000521491	KCNA6	P17658	529 aa		7.85	□□□□□ -1.15
CDH17-205	ENST00000521491	DSG2	Q14126	1118 aa		7.85	□□□□□ -1.15
CDH17-205	ENST00000521491	C3orf67	Q6ZVT6	689 aa		7.85	□□□□□ -1.15
CDH17-205	ENST00000521491	PROSER2	Q86WR7	435 aa	Predicted RBP	7.85	□□□□□ -1.15
CDH17-205	ENST00000521491	ARIH1	Q9Y4X5	557 aa	Predicted RBP	7.85	□□□□□ -1.15
CDH17-205	ENST00000521491	TRPM2	O94759	1503 aa		7.84	□□□□□ -1.15
CDH17-205	ENST00000521491	C2orf72	A6NCS6	295 aa		7.84	□□□□□ -1.15
CDH17-205	ENST00000521491	KIF3C	O14782	793 aa		7.84	□□□□□ -1.15
CDH17-205	ENST00000521491	SIN3A	Q96ST3	1273 aa		7.84	□□□□□ -1.15
CDH17-205	ENST00000521491	KIF1B	O60333	1816 aa		7.84	□□□□□ -1.15
CDH17-205	ENST00000521491	ANKRD30B	Q9BXX2	1392 aa		7.84	□□□□□ -1.16
CDH17-205	ENST00000521491	SETD1A	O15047	1707 aa	Known RBP	7.83	□□□□□ -1.16
CDH17-205	ENST00000521491	KDM5A	P29375	1690 aa	Known RBP	7.83	□□□□□ -1.16
CDH17-205	ENST00000521491	NEUROD1	Q13562	356 aa		7.83	□□□□□ -1.16
CDH17-205	ENST00000521491	NOS1	P29475	1434 aa		7.83	□□□□□ -1.16
CDH17-205	ENST00000521491	MYO5B	Q9ULV0	1848 aa		7.82	□□□□□ -1.16
CDH17-205	ENST00000521491	RPRD2	Q5VT52	1461 aa	Known RBP	7.82	□□□□□ -1.16
CDH17-205	ENST00000521491	NWD1	Q149M9	1564 aa		7.82	□□□□□ -1.16
CDH17-205	ENST00000521491	ADGRB3	O60242	1522 aa		7.82	□□□□□ -1.16
CDH17-205	ENST00000521491	PHLPP1	O60346	1717 aa		7.81	□□□□□ -1.16
CDH17-205	ENST00000521491	TULP1	O00294	542 aa	Predicted RBP	7.81	□□□□□ -1.16
CDH17-205	ENST00000521491	PLPP6	Q8IY26	295 aa		7.81	□□□□□ -1.16
CDH17-205	ENST00000521491	SLAIN2	Q9P270	581 aa		7.81	□□□□□ -1.16
CDH17-205	ENST00000521491	CHD2	O14647	1828 aa	Known RBP	7.8	□□□□□ -1.16
CDH17-205	ENST00000521491	CCDC144A	A2RUR9	1427 aa		7.8	□□□□□ -1.16
CDH17-205	ENST00000521491	ZEB1	P37275	1124 aa	Predicted RBP	7.8	□□□□□ -1.16
CDH17-205	ENST00000521491	MSH6	P52701	1360 aa		7.8	□□□□□ -1.16
CDH17-205	ENST00000521491	IFT172	Q9UG01	1749 aa		7.8	□□□□□ -1.16
CDH17-205	ENST00000521491	NKTR	P30414	1462 aa	Known RBP	7.8	□□□□□ -1.16
CDH17-205	ENST00000521491	ZFYVE9	O95405	1425 aa		7.79	□□□□□ -1.16
CDH17-205	ENST00000521491	TPRN	Q4KMQ1	711 aa		7.79	□□□□□ -1.16
CDH17-205	ENST00000521491	NUTM2D	Q5VT03	806 aa	Predicted RBP	7.79	□□□□□ -1.16
CDH17-205	ENST00000521491	TMEM92	Q6UXU6	159 aa		7.79	□□□□□ -1.16
CDH17-205	ENST00000521491	TONSL	Q96HA7	1378 aa		7.79	□□□□□ -1.16
CDH17-205	ENST00000521491	TMEM131L	A2VDJ0	1609 aa		7.78	□□□□□ -1.16
CDH17-205	ENST00000521491	LRP6	O75581	1613 aa		7.78	□□□□□ -1.16
CDH17-205	ENST00000521491	COL16A1	Q07092	1604 aa	Predicted RBP	7.78	□□□□□ -1.16
CDH17-205	ENST00000521491	SLC52A1	Q9NWF4	448 aa		7.78	□□□□□ -1.16
CDH17-205	ENST00000521491	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	7.78	□□□□□ -1.16
CDH17-205	ENST00000521491	JCAD	Q9P266	1359 aa		7.78	□□□□□ -1.16
CDH17-205	ENST00000521491	PLEKHG1	Q9ULL1	1385 aa		7.78	□□□□□ -1.16
CDH17-205	ENST00000521491	RIMS2	Q9UQ26	1411 aa		7.78	□□□□□ -1.16
CDH17-205	ENST00000521491	PPL	O60437	1756 aa		7.77	□□□□□ -1.17
CDH17-205	ENST00000521491	EMILIN3	Q9NT22	766 aa		7.77	□□□□□ -1.17
CDH17-205	ENST00000521491	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	7.76	□□□□□ -1.17
CDH17-205	ENST00000521491	TESPA1	A2RU30	521 aa	Predicted RBP	7.76	□□□□□ -1.17
CDH17-205	ENST00000521491	SEMA3E	O15041	775 aa		7.76	□□□□□ -1.17
CDH17-205	ENST00000521491	PPP1R15A	O75807	674 aa	Predicted RBP	7.76	□□□□□ -1.17
CDH17-205	ENST00000521491	TBX22	Q9Y458	520 aa		7.76	□□□□□ -1.17
CDH17-205	ENST00000521491	ADAMTS13	Q76LX8	1427 aa		7.76	□□□□□ -1.17
CDH17-205	ENST00000521491	SPDYE16	A6NNV3	312 aa	Predicted RBP	7.75	□□□□□ -1.17
CDH17-205	ENST00000521491	DPYSL4	O14531	572 aa		7.75	□□□□□ -1.17
CDH17-205	ENST00000521491	SMYD5	Q6GMV2	418 aa		7.75	□□□□□ -1.17
CDH17-205	ENST00000521491	C14orf37	Q86TY3	774 aa		7.75	□□□□□ -1.17
CDH17-205	ENST00000521491	UPF1	Q92900	1129 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
CDH17-205	ENST00000521491	SPATA31E1	Q6ZUB1	1445 aa		7.75	□□□□□ -1.17
CDH17-205	ENST00000521491	PRKCSH	P14314	528 aa	Predicted RBP	7.74	□□□□□ -1.17
CDH17-205	ENST00000521491	PDIA6	Q15084	440 aa		7.74	□□□□□ -1.17
CDH17-205	ENST00000521491	MEX3C	Q5U5Q3	659 aa	Known RBP	7.74	□□□□□ -1.17
CDH17-205	ENST00000521491	PTPRU	Q92729	1446 aa		7.74	□□□□□ -1.17
CDH17-205	ENST00000521491	SPATA31A6	Q5VVP1	1343 aa		7.74	□□□□□ -1.17
CDH17-205	ENST00000521491	AHDC1	Q5TGY3	1603 aa	Predicted RBP	7.74	□□□□□ -1.17
CDH17-205	ENST00000521491	TRPM1	Q7Z4N2	1603 aa		7.74	□□□□□ -1.17
CDH17-205	ENST00000521491	SHPRH	Q149N8	1683 aa		7.73	□□□□□ -1.17
CDH17-205	ENST00000521491	DIP2A	Q14689	1571 aa		7.73	□□□□□ -1.17
CDH17-205	ENST00000521491	NCOA3	Q9Y6Q9	1424 aa		7.73	□□□□□ -1.17
CDH17-205	ENST00000521491	NUTM2B	A6NNL0	878 aa	Predicted RBP	7.73	□□□□□ -1.17
CDH17-205	ENST00000521491	NUTM2E	B1AL46	878 aa	Predicted RBP	7.73	□□□□□ -1.17
CDH17-205	ENST00000521491	HDGF	P51858	240 aa	Known RBP	7.73	□□□□□ -1.17
CDH17-205	ENST00000521491	RGL3	Q3MIN7	710 aa		7.73	□□□□□ -1.17
CDH17-205	ENST00000521491	LMOD2	Q6P5Q4	547 aa		7.73	□□□□□ -1.17
CDH17-205	ENST00000521491	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
CDH17-205	ENST00000521491	NUTM2A	Q8IVF1	878 aa	Predicted RBP	7.73	□□□□□ -1.17
CDH17-205	ENST00000521491	L3MBTL2	Q969R5	705 aa		7.73	□□□□□ -1.17
CDH17-205	ENST00000521491	C19orf44	Q9H6X5	657 aa		7.73	□□□□□ -1.17
CDH17-205	ENST00000521491	NEXMIF	Q5QGS0	1516 aa		7.73	□□□□□ -1.17
CDH17-205	ENST00000521491	ATF3	P18847	181 aa		7.72	□□□□□ -1.17
CDH17-205	ENST00000521491	MAP3K9	P80192	1104 aa		7.72	□□□□□ -1.17
CDH17-205	ENST00000521491	ZNF772	Q68DY9	489 aa	Predicted RBP	7.72	□□□□□ -1.17
CDH17-205	ENST00000521491	BRINP3	Q76B58	766 aa		7.72	□□□□□ -1.17
CDH17-205	ENST00000521491	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
CDH17-205	ENST00000521491	AMOTL2	Q9Y2J4	779 aa		7.72	□□□□□ -1.17
CDH17-205	ENST00000521491	RXRB	P28702	533 aa		7.71	□□□□□ -1.18
CDH17-205	ENST00000521491	MAMSTR	Q6ZN01	415 aa		7.71	□□□□□ -1.18
CDH17-205	ENST00000521491	OXER1	Q8TDS5	423 aa		7.71	□□□□□ -1.18
CDH17-205	ENST00000521491	DDX17	Q92841	729 aa	Known RBP	7.71	□□□□□ -1.18
CDH17-205	ENST00000521491	TIMELESS	Q9UNS1	1208 aa		7.71	□□□□□ -1.18
CDH17-205	ENST00000521491	NRXN3	Q9Y4C0	1643 aa		7.7	□□□□□ -1.18
CDH17-205	ENST00000521491	MYOM2	P54296	1465 aa		7.7	□□□□□ -1.18
CDH17-205	ENST00000521491	ZNF326	Q5BKZ1	582 aa	Known RBP	7.7	□□□□□ -1.18
CDH17-205	ENST00000521491	DCAF11	Q8TEB1	546 aa		7.7	□□□□□ -1.18
CDH17-205	ENST00000521491	PIK3R4	Q99570	1358 aa		7.7	□□□□□ -1.18
CDH17-205	ENST00000521491	KIAA1210	Q9ULL0	1709 aa		7.69	□□□□□ -1.18
CDH17-205	ENST00000521491	ASXL1	Q8IXJ9	1541 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms