RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 IRX2Q9BZI1 471 aaPredicted RBP12.85□□□□□ -0.35
NUDCD1-204ENST00000521439 CD2BP2O95400 341 aaKnown RBP12.84□□□□□ -0.35
NUDCD1-204ENST00000521439 CCNYL3P0C7X3 344 aa12.84□□□□□ -0.35
NUDCD1-204ENST00000521439 TBC1D2BQ9UPU7 963 aa12.84□□□□□ -0.35
NUDCD1-204ENST00000521439 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
NUDCD1-204ENST00000521439 ZNF697Q5TEC3 545 aa12.83□□□□□ -0.36
NUDCD1-204ENST00000521439 TRIM34Q9BYJ4 488 aa12.83□□□□□ -0.36
NUDCD1-204ENST00000521439 C1orf115Q9H7X2 142 aa12.83□□□□□ -0.36
NUDCD1-204ENST00000521439 NDUFB9Q9Y6M9 179 aa12.83□□□□□ -0.36
NUDCD1-204ENST00000521439 PER1O15534 1290 aaPredicted RBP12.82□□□□□ -0.36
NUDCD1-204ENST00000521439 ABL2P42684 1182 aa12.82□□□□□ -0.36
NUDCD1-204ENST00000521439 LYPD8Q6UX82 237 aa12.82□□□□□ -0.36
NUDCD1-204ENST00000521439 WWC1Q8IX03 1113 aa12.81□□□□□ -0.36
NUDCD1-204ENST00000521439 TRIM32Q13049 653 aa12.8□□□□□ -0.36
NUDCD1-204ENST00000521439 EVA1BQ9NVM1 165 aa12.8□□□□□ -0.36
NUDCD1-204ENST00000521439 ZNF777Q9ULD5 760 aaPredicted RBP12.79□□□□□ -0.36
NUDCD1-204ENST00000521439 ZNF330Q9Y3S2 320 aaPredicted RBP12.79□□□□□ -0.36
NUDCD1-204ENST00000521439 LAPTM4AQ15012 233 aa12.78□□□□□ -0.36
NUDCD1-204ENST00000521439 KCNH2Q12809 1159 aa12.77□□□□□ -0.37
NUDCD1-204ENST00000521439 NR6A1Q15406 480 aa12.76□□□□□ -0.37
NUDCD1-204ENST00000521439 PTCRAQ6ISU1 281 aaPredicted RBP12.76□□□□□ -0.37
NUDCD1-204ENST00000521439 EPS8L1Q8TE68 723 aa12.76□□□□□ -0.37
NUDCD1-204ENST00000521439 PDZRN3Q9UPQ7 1066 aa12.76□□□□□ -0.37
NUDCD1-204ENST00000521439 GFRA3O60609 400 aa12.75□□□□□ -0.37
NUDCD1-204ENST00000521439 PRR20EP86478 221 aa12.75□□□□□ -0.37
NUDCD1-204ENST00000521439 PRR20CP86479 221 aa12.75□□□□□ -0.37
NUDCD1-204ENST00000521439 PRR20DP86480 221 aa12.75□□□□□ -0.37
NUDCD1-204ENST00000521439 PRR20BP86481 221 aa12.75□□□□□ -0.37
NUDCD1-204ENST00000521439 PRR20AP86496 221 aa12.75□□□□□ -0.37
NUDCD1-204ENST00000521439 ARXQ96QS3 562 aa12.75□□□□□ -0.37
NUDCD1-204ENST00000521439 CTHP32929 405 aa12.74□□□□□ -0.37
NUDCD1-204ENST00000521439 TRIM67Q6ZTA4 783 aa12.74□□□□□ -0.37
NUDCD1-204ENST00000521439 UNC93B1Q9H1C4 597 aa12.74□□□□□ -0.37
NUDCD1-204ENST00000521439 NRG2O14511 850 aaPredicted RBP12.73□□□□□ -0.37
NUDCD1-204ENST00000521439 GDF9O60383 454 aa12.73□□□□□ -0.37
NUDCD1-204ENST00000521439 F12P00748 615 aaPredicted RBP12.73□□□□□ -0.37
NUDCD1-204ENST00000521439 IRF5Q13568 498 aa12.73□□□□□ -0.37
NUDCD1-204ENST00000521439 GPR37L1O60883 481 aa12.72□□□□□ -0.37
NUDCD1-204ENST00000521439 WNT7BP56706 349 aa12.72□□□□□ -0.37
NUDCD1-204ENST00000521439 ARID3AQ99856 593 aa12.71□□□□□ -0.37
NUDCD1-204ENST00000521439 FOXC1Q12948 553 aa12.7□□□□□ -0.38
NUDCD1-204ENST00000521439 WASHC4Q2M389 1173 aa12.7□□□□□ -0.38
NUDCD1-204ENST00000521439 PKD2L1Q9P0L9 805 aa12.7□□□□□ -0.38
NUDCD1-204ENST00000521439 MAP10Q9P2G4 905 aa12.7□□□□□ -0.38
NUDCD1-204ENST00000521439 TNFRSF10AO00220 468 aa12.69□□□□□ -0.38
NUDCD1-204ENST00000521439 PNMA1Q8ND90 353 aa12.69□□□□□ -0.38
NUDCD1-204ENST00000521439 WNT7AO00755 349 aa12.68□□□□□ -0.38
NUDCD1-204ENST00000521439 CCDC82Q8N4S0 544 aa12.68□□□□□ -0.38
NUDCD1-204ENST00000521439 SKOR1P84550 965 aa12.67□□□□□ -0.38
NUDCD1-204ENST00000521439 POM121CA8CG34 1229 aa12.66□□□□□ -0.38
NUDCD1-204ENST00000521439 BAP1Q92560 729 aa12.65□□□□□ -0.38
NUDCD1-204ENST00000521439 SH3BP2P78314 561 aa12.64□□□□□ -0.39
NUDCD1-204ENST00000521439 LINC01559Q495D7 138 aa12.64□□□□□ -0.39
NUDCD1-204ENST00000521439 RC3H1Q5TC82 1133 aaKnown RBP12.64□□□□□ -0.39
NUDCD1-204ENST00000521439 ZNF511Q8NB15 262 aa12.64□□□□□ -0.39
NUDCD1-204ENST00000521439 ARMC2Q8NEN0 867 aa12.64□□□□□ -0.39
NUDCD1-204ENST00000521439 FKBPLQ9UIM3 349 aa12.64□□□□□ -0.39
NUDCD1-204ENST00000521439 SERPINA10Q9UK55 444 aa12.64□□□□□ -0.39
NUDCD1-204ENST00000521439 VAC14Q08AM6 782 aa12.63□□□□□ -0.39
NUDCD1-204ENST00000521439 Q6ZNB5 142 aa12.63□□□□□ -0.39
NUDCD1-204ENST00000521439 HOMEZQ8IX15 550 aa12.63□□□□□ -0.39
NUDCD1-204ENST00000521439 CCDC97Q96F63 343 aaPredicted RBP12.63□□□□□ -0.39
NUDCD1-204ENST00000521439 CYP4X1Q8N118 509 aa12.62□□□□□ -0.39
NUDCD1-204ENST00000521439 GLMNQ92990 594 aa12.62□□□□□ -0.39
NUDCD1-204ENST00000521439 CALR3Q96L12 384 aaKnown RBP12.62□□□□□ -0.39
NUDCD1-204ENST00000521439 MRGPRX2Q96LB1 330 aa12.62□□□□□ -0.39
NUDCD1-204ENST00000521439 ZC3H4Q9UPT8 1303 aaKnown RBP12.61□□□□□ -0.39
NUDCD1-204ENST00000521439 EHBP1Q8NDI1 1231 aa12.6□□□□□ -0.39
NUDCD1-204ENST00000521439 TOR4AQ9NXH8 423 aa12.6□□□□□ -0.39
NUDCD1-204ENST00000521439 NBPF14Q5TI25 921 aa12.59□□□□□ -0.39
NUDCD1-204ENST00000521439 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
NUDCD1-204ENST00000521439 SNIP1Q8TAD8 396 aaKnown RBP12.58□□□□□ -0.4
NUDCD1-204ENST00000521439 TTC24A2A3L6 582 aaPredicted RBP12.57□□□□□ -0.4
NUDCD1-204ENST00000521439 FAM187AA6NFU0 413 aa12.57□□□□□ -0.4
NUDCD1-204ENST00000521439 DGAT1O75907 488 aa12.57□□□□□ -0.4
NUDCD1-204ENST00000521439 PKDCCQ504Y2 493 aa12.57□□□□□ -0.4
NUDCD1-204ENST00000521439 GPKOWQ92917 476 aaPredicted RBP eCLIP12.57□□□□□ -0.4
NUDCD1-204ENST00000521439 VARSP26640 1264 aaKnown RBP12.56□□□□□ -0.4
NUDCD1-204ENST00000521439 SOX11P35716 441 aa12.56□□□□□ -0.4
NUDCD1-204ENST00000521439 NR1H3Q13133 447 aa12.56□□□□□ -0.4
NUDCD1-204ENST00000521439 ADAMTS19Q8TE59 1207 aa12.56□□□□□ -0.4
NUDCD1-204ENST00000521439 ALG2Q9H553 416 aa12.56□□□□□ -0.4
NUDCD1-204ENST00000521439 ZBBXA8MT70 800 aa12.55□□□□□ -0.4
NUDCD1-204ENST00000521439 FBXO45P0C2W1 286 aa12.54□□□□□ -0.4
NUDCD1-204ENST00000521439 BPHLQ86WA6 291 aaPredicted RBP12.54□□□□□ -0.4
NUDCD1-204ENST00000521439 EIF4G2P78344 907 aaKnown RBP eCLIP12.53□□□□□ -0.4
NUDCD1-204ENST00000521439 AGERQ15109 404 aa12.53□□□□□ -0.4
NUDCD1-204ENST00000521439 PDXDC2PQ6P474 469 aa12.53□□□□□ -0.4
NUDCD1-204ENST00000521439 FOXJ1Q92949 421 aa12.53□□□□□ -0.4
NUDCD1-204ENST00000521439 SIAH2O43255 324 aa12.52□□□□□ -0.41
NUDCD1-204ENST00000521439 GPSM3Q9Y4H4 160 aa12.52□□□□□ -0.41
NUDCD1-204ENST00000521439 PTK2Q05397 1052 aa12.51□□□□□ -0.41
NUDCD1-204ENST00000521439 SEMA3FQ13275 785 aa12.51□□□□□ -0.41
NUDCD1-204ENST00000521439 TRAF7Q6Q0C0 670 aa12.51□□□□□ -0.41
NUDCD1-204ENST00000521439 FAM174AQ8TBP5 190 aa12.51□□□□□ -0.41
NUDCD1-204ENST00000521439 SH3RF1Q7Z6J0 888 aa12.5□□□□□ -0.41
NUDCD1-204ENST00000521439 SH3BP5LQ7L8J4 393 aa12.49□□□□□ -0.41
NUDCD1-204ENST00000521439 MPNDQ8N594 471 aa12.49□□□□□ -0.41
NUDCD1-204ENST00000521439 J3QL48 77 aa12.48□□□□□ -0.41
NUDCD1-204ENST00000521439 ALDH1A1P00352 501 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms