RNA–Protein interactions for RNA: ENST00000521147.1

CASC9-202, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 731 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-202ENST00000521147 MYT1Q01538 1121 aa11.31□□□□□ -0.6
CASC9-202ENST00000521147 HFM1A2PYH4 1435 aa11.3□□□□□ -0.6
CASC9-202ENST00000521147 NAIPQ13075 1403 aa11.3□□□□□ -0.6
CASC9-202ENST00000521147 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
CASC9-202ENST00000521147 DIEXFQ68CQ4 756 aaKnown RBP11.3□□□□□ -0.6
CASC9-202ENST00000521147 LHX8Q68G74 356 aa11.3□□□□□ -0.6
CASC9-202ENST00000521147 FARP1Q9Y4F1 1045 aaPredicted RBP11.3□□□□□ -0.6
CASC9-202ENST00000521147 SPATA31A3Q5VYP0 1347 aa11.3□□□□□ -0.6
CASC9-202ENST00000521147 RGPD1P0DJD0 1748 aa11.29□□□□□ -0.6
CASC9-202ENST00000521147 TNS1Q9HBL0 1735 aaKnown RBP11.29□□□□□ -0.6
CASC9-202ENST00000521147 NWD2Q9ULI1 1742 aa11.29□□□□□ -0.6
CASC9-202ENST00000521147 PPLO60437 1756 aa11.29□□□□□ -0.6
CASC9-202ENST00000521147 PRAG1Q86YV5 1406 aa11.29□□□□□ -0.6
CASC9-202ENST00000521147 YY1P25490 414 aa11.29□□□□□ -0.6
CASC9-202ENST00000521147 VPS72Q15906 364 aa11.29□□□□□ -0.6
CASC9-202ENST00000521147 NRAPQ86VF7 1730 aa11.29□□□□□ -0.6
CASC9-202ENST00000521147 FMN2Q9NZ56 1722 aa11.29□□□□□ -0.6
CASC9-202ENST00000521147 ROCK1Q13464 1354 aa11.28□□□□□ -0.6
CASC9-202ENST00000521147 PLEKHH1Q9ULM0 1364 aa11.28□□□□□ -0.6
CASC9-202ENST00000521147 HAP1P54257 671 aaPredicted RBP11.28□□□□□ -0.6
CASC9-202ENST00000521147 WAPLQ7Z5K2 1190 aa11.28□□□□□ -0.6
CASC9-202ENST00000521147 FAM98CQ17RN3 349 aaKnown RBP11.27□□□□□ -0.61
CASC9-202ENST00000521147 STK26Q9P289 416 aa11.27□□□□□ -0.61
CASC9-202ENST00000521147 ONECUT3O60422 494 aaPredicted RBP11.26□□□□□ -0.61
CASC9-202ENST00000521147 EZH2Q15910 746 aaKnown RBP11.26□□□□□ -0.61
CASC9-202ENST00000521147 KRT28Q7Z3Y7 464 aa11.26□□□□□ -0.61
CASC9-202ENST00000521147 KIF1AQ12756 1690 aa11.26□□□□□ -0.61
CASC9-202ENST00000521147 DHX57Q6P158 1386 aaKnown RBP11.26□□□□□ -0.61
CASC9-202ENST00000521147 IFT172Q9UG01 1749 aa11.25□□□□□ -0.61
CASC9-202ENST00000521147 LRPPRCP42704 1394 aaKnown RBP11.25□□□□□ -0.61
CASC9-202ENST00000521147 TNS3Q68CZ2 1445 aa11.25□□□□□ -0.61
CASC9-202ENST00000521147 CAMTA1Q9Y6Y1 1673 aa11.24□□□□□ -0.61
CASC9-202ENST00000521147 FAM83GA6ND36 823 aa11.24□□□□□ -0.61
CASC9-202ENST00000521147 VGFO15240 615 aaPredicted RBP11.24□□□□□ -0.61
CASC9-202ENST00000521147 LMOD2Q6P5Q4 547 aa11.24□□□□□ -0.61
CASC9-202ENST00000521147 CCDC144AA2RUR9 1427 aa11.24□□□□□ -0.61
CASC9-202ENST00000521147 ACIN1Q9UKV3 1341 aaKnown RBP11.22□□□□□ -0.61
CASC9-202ENST00000521147 THSD7AQ9UPZ6 1657 aa11.22□□□□□ -0.61
CASC9-202ENST00000521147 NUP188Q5SRE5 1749 aa11.21□□□□□ -0.61
CASC9-202ENST00000521147 KNDC1Q76NI1 1749 aa11.21□□□□□ -0.61
CASC9-202ENST00000521147 ADGRF5Q8IZF2 1346 aa11.21□□□□□ -0.61
CASC9-202ENST00000521147 TMEM132EQ6IEE7 984 aa11.21□□□□□ -0.61
CASC9-202ENST00000521147 BTG4Q9NY30 223 aa11.21□□□□□ -0.61
CASC9-202ENST00000521147 RREB1Q92766 1687 aa11.2□□□□□ -0.62
CASC9-202ENST00000521147 DISP2A7MBM2 1401 aa11.2□□□□□ -0.62
CASC9-202ENST00000521147 TRIM37O94972 964 aa11.2□□□□□ -0.62
CASC9-202ENST00000521147 TECPR2O15040 1411 aa11.19□□□□□ -0.62
CASC9-202ENST00000521147 CAMKK2Q96RR4 588 aa11.19□□□□□ -0.62
CASC9-202ENST00000521147 PHF8Q9UPP1 1060 aa11.19□□□□□ -0.62
CASC9-202ENST00000521147 COL14A1Q05707 1796 aaKnown RBP11.18□□□□□ -0.62
CASC9-202ENST00000521147 TRPM3Q9HCF6 1732 aaPredicted RBP11.18□□□□□ -0.62
CASC9-202ENST00000521147 PELP1Q8IZL8 1130 aaKnown RBP11.18□□□□□ -0.62
CASC9-202ENST00000521147 ADGRB2O60241 1585 aa11.18□□□□□ -0.62
CASC9-202ENST00000521147 PMFBP1Q8TBY8 1022 aa11.17□□□□□ -0.62
CASC9-202ENST00000521147 TIMELESSQ9UNS1 1208 aa11.17□□□□□ -0.62
CASC9-202ENST00000521147 CRYBG1Q9Y4K1 1723 aa11.17□□□□□ -0.62
CASC9-202ENST00000521147 NRXN1Q9ULB1 1477 aa11.17□□□□□ -0.62
CASC9-202ENST00000521147 RAB3GAP2Q9H2M9 1393 aa11.16□□□□□ -0.62
CASC9-202ENST00000521147 SPATA31A5Q5VU36 1347 aa11.16□□□□□ -0.62
CASC9-202ENST00000521147 RPGRIP1LQ68CZ1 1315 aa11.16□□□□□ -0.62
CASC9-202ENST00000521147 SPATA31A7Q8IWB4 1347 aa11.16□□□□□ -0.62
CASC9-202ENST00000521147 SAFB2Q14151 953 aaKnown RBP eCLIP11.16□□□□□ -0.62
CASC9-202ENST00000521147 ALS2Q96Q42 1657 aa11.16□□□□□ -0.62
CASC9-202ENST00000521147 SBNO1A3KN83 1393 aa11.16□□□□□ -0.62
CASC9-202ENST00000521147 APBA3O96018 575 aa11.15□□□□□ -0.62
CASC9-202ENST00000521147 POTEIP0CG38 1075 aa11.15□□□□□ -0.62
CASC9-202ENST00000521147 PSME1Q06323 249 aa11.15□□□□□ -0.62
CASC9-202ENST00000521147 RGL3Q3MIN7 710 aa11.15□□□□□ -0.62
CASC9-202ENST00000521147 DCBLD2Q96PD2 775 aa11.15□□□□□ -0.62
CASC9-202ENST00000521147 ARHGEF10O15013 1369 aa11.15□□□□□ -0.63
CASC9-202ENST00000521147 ABCC11Q96J66 1382 aa11.15□□□□□ -0.63
CASC9-202ENST00000521147 CLCN6P51797 869 aa11.14□□□□□ -0.63
CASC9-202ENST00000521147 PPP1R1BQ9UD71 204 aaPredicted RBP11.14□□□□□ -0.63
CASC9-202ENST00000521147 YTHDC2Q9H6S0 1430 aaKnown RBP11.14□□□□□ -0.63
CASC9-202ENST00000521147 SENP3-EIF4A1A0A087X0R7 540 aa11.12□□□□□ -0.63
CASC9-202ENST00000521147 NRKQ7Z2Y5 1582 aa11.11□□□□□ -0.63
CASC9-202ENST00000521147 PIK3C2GO75747 1445 aa11.11□□□□□ -0.63
CASC9-202ENST00000521147 CHRNA2Q15822 529 aa11.11□□□□□ -0.63
CASC9-202ENST00000521147 ZNF784Q8NCA9 323 aaPredicted RBP11.11□□□□□ -0.63
CASC9-202ENST00000521147 STRN4Q9NRL3 753 aa11.11□□□□□ -0.63
CASC9-202ENST00000521147 CREBZFQ9NS37 354 aa11.11□□□□□ -0.63
CASC9-202ENST00000521147 USP35Q9P2H5 1018 aa11.11□□□□□ -0.63
CASC9-202ENST00000521147 SPATA31A1Q5TZJ5 1347 aa11.1□□□□□ -0.63
CASC9-202ENST00000521147 KCNQ2O43526 872 aa11.1□□□□□ -0.63
CASC9-202ENST00000521147 FAM196AQ6ZSG2 479 aa11.1□□□□□ -0.63
CASC9-202ENST00000521147 SPON1Q9HCB6 807 aa11.1□□□□□ -0.63
CASC9-202ENST00000521147 MYOM1P52179 1685 aa11.1□□□□□ -0.63
CASC9-202ENST00000521147 NINLQ9Y2I6 1382 aa11.09□□□□□ -0.63
CASC9-202ENST00000521147 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
CASC9-202ENST00000521147 PRAM1Q96QH2 718 aa11.09□□□□□ -0.63
CASC9-202ENST00000521147 PDGFDQ9GZP0 370 aaPredicted RBP11.09□□□□□ -0.63
CASC9-202ENST00000521147 PRDM11Q9NQV5 511 aa11.09□□□□□ -0.63
CASC9-202ENST00000521147 PHRF1Q9P1Y6 1649 aaKnown RBP11.09□□□□□ -0.63
CASC9-202ENST00000521147 SPATA31E1Q6ZUB1 1445 aa11.09□□□□□ -0.63
CASC9-202ENST00000521147 CASZ1Q86V15 1759 aa11.08□□□□□ -0.64
CASC9-202ENST00000521147 PARD3Q8TEW0 1356 aa11.08□□□□□ -0.64
CASC9-202ENST00000521147 KIAA0232Q92628 1395 aa11.08□□□□□ -0.64
CASC9-202ENST00000521147 ZNF579Q8NAF0 562 aaKnown RBP11.08□□□□□ -0.64
CASC9-202ENST00000521147 HIRIP3Q9BW71 556 aaPredicted RBP11.08□□□□□ -0.64
CASC9-202ENST00000521147 PRR36Q9H6K5 1346 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms