RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 ZRANB1Q9UGI0 708 aa29.52■■■□□ 2.32
PABPC1-217ENST00000521067 BRWD3Q6RI45 1802 aa29.52■■■□□ 2.32
PABPC1-217ENST00000521067 BLMP54132 1417 aaPredicted RBP29.51■■■□□ 2.31
PABPC1-217ENST00000521067 KRT27Q7Z3Y8 459 aa29.5■■■□□ 2.31
PABPC1-217ENST00000521067 DEFB132Q7Z7B7 95 aa29.5■■■□□ 2.31
PABPC1-217ENST00000521067 FAM98CQ17RN3 349 aaKnown RBP29.49■■■□□ 2.31
PABPC1-217ENST00000521067 NBPF8Q3BBV2 869 aa29.45■■■□□ 2.31
PABPC1-217ENST00000521067 CCDC61Q9Y6R9 512 aa29.45■■■□□ 2.31
PABPC1-217ENST00000521067 NRAPQ86VF7 1730 aa29.45■■■□□ 2.3
PABPC1-217ENST00000521067 ACEP12821 1306 aa29.45■■■□□ 2.3
PABPC1-217ENST00000521067 NUTM2GQ5VZR2 741 aa29.44■■■□□ 2.3
PABPC1-217ENST00000521067 PRDM11Q9NQV5 511 aa29.44■■■□□ 2.3
PABPC1-217ENST00000521067 PLEKHG3A1L390 1219 aa29.43■■■□□ 2.3
PABPC1-217ENST00000521067 SPATA31A5Q5VU36 1347 aa29.43■■■□□ 2.3
PABPC1-217ENST00000521067 SPATA31A7Q8IWB4 1347 aa29.43■■■□□ 2.3
PABPC1-217ENST00000521067 POLR3AO14802 1390 aaPredicted RBP29.42■■■□□ 2.3
PABPC1-217ENST00000521067 A0A0G2JS52 829 aa29.42■■■□□ 2.3
PABPC1-217ENST00000521067 MYT1Q01538 1121 aa29.42■■■□□ 2.3
PABPC1-217ENST00000521067 COL14A1Q05707 1796 aaKnown RBP29.41■■■□□ 2.3
PABPC1-217ENST00000521067 CHRNA2Q15822 529 aa29.41■■■□□ 2.3
PABPC1-217ENST00000521067 CRYBG1Q9Y4K1 1723 aa29.41■■■□□ 2.3
PABPC1-217ENST00000521067 KIAA0232Q92628 1395 aa29.4■■■□□ 2.3
PABPC1-217ENST00000521067 ZC3H6P61129 1189 aaKnown RBP29.39■■■□□ 2.3
PABPC1-217ENST00000521067 KIAA1210Q9ULL0 1709 aa29.39■■■□□ 2.3
PABPC1-217ENST00000521067 SF3B2Q13435 895 aaKnown RBP29.38■■■□□ 2.29
PABPC1-217ENST00000521067 FAM182BQ5T319 152 aa29.38■■■□□ 2.29
PABPC1-217ENST00000521067 L3MBTL2Q969R5 705 aa29.36■■■□□ 2.29
PABPC1-217ENST00000521067 ITSN1Q15811 1721 aa29.36■■■□□ 2.29
PABPC1-217ENST00000521067 CABP2Q9NPB3 220 aa29.34■■■□□ 2.29
PABPC1-217ENST00000521067 CENPJQ9HC77 1338 aaPredicted RBP29.34■■■□□ 2.29
PABPC1-217ENST00000521067 ABTB2Q8N961 1025 aa29.33■■■□□ 2.29
PABPC1-217ENST00000521067 SIN3AQ96ST3 1273 aa29.33■■■□□ 2.29
PABPC1-217ENST00000521067 SPATA31A1Q5TZJ5 1347 aa29.33■■■□□ 2.29
PABPC1-217ENST00000521067 TOPAZ1Q8N9V7 1692 aa29.33■■■□□ 2.29
PABPC1-217ENST00000521067 SRPK2P78362 688 aaKnown RBP29.32■■■□□ 2.28
PABPC1-217ENST00000521067 STRN4Q9NRL3 753 aa29.32■■■□□ 2.28
PABPC1-217ENST00000521067 PPIP5K1Q6PFW1 1433 aa29.28■■■□□ 2.28
PABPC1-217ENST00000521067 PHRF1Q9P1Y6 1649 aaKnown RBP29.27■■■□□ 2.28
PABPC1-217ENST00000521067 USP19O94966 1318 aa29.26■■■□□ 2.27
PABPC1-217ENST00000521067 CABP1Q9NZU7 370 aa29.26■■■□□ 2.27
PABPC1-217ENST00000521067 THSD7AQ9UPZ6 1657 aa29.25■■■□□ 2.27
PABPC1-217ENST00000521067 BAG6P46379 1132 aa29.25■■■□□ 2.27
PABPC1-217ENST00000521067 EN1Q05925 392 aaPredicted RBP29.24■■■□□ 2.27
PABPC1-217ENST00000521067 USP35Q9P2H5 1018 aa29.24■■■□□ 2.27
PABPC1-217ENST00000521067 GCP02774 474 aa29.23■■■□□ 2.27
PABPC1-217ENST00000521067 EVA1CP58658 441 aa29.23■■■□□ 2.27
PABPC1-217ENST00000521067 LARP1Q6PKG0 1096 aaKnown RBP29.23■■■□□ 2.27
PABPC1-217ENST00000521067 CAMTA1Q9Y6Y1 1673 aa29.22■■■□□ 2.27
PABPC1-217ENST00000521067 NLRP13Q86W25 1043 aa29.22■■■□□ 2.27
PABPC1-217ENST00000521067 CPDO75976 1380 aa29.22■■■□□ 2.27
PABPC1-217ENST00000521067 NEUROD1Q13562 356 aa29.21■■■□□ 2.27
PABPC1-217ENST00000521067 SSH2Q76I76 1423 aa29.2■■■□□ 2.27
PABPC1-217ENST00000521067 NRKQ7Z2Y5 1582 aa29.2■■■□□ 2.26
PABPC1-217ENST00000521067 PSDA5PKW4 1024 aaPredicted RBP29.19■■■□□ 2.26
PABPC1-217ENST00000521067 BARGINQ6ZT62 677 aa29.18■■■□□ 2.26
PABPC1-217ENST00000521067 USP6P35125 1406 aa29.16■■■□□ 2.26
PABPC1-217ENST00000521067 QRICH2Q9H0J4 1663 aa29.15■■■□□ 2.26
PABPC1-217ENST00000521067 TRIM37O94972 964 aa29.15■■■□□ 2.26
PABPC1-217ENST00000521067 NLRP6P59044 892 aa29.15■■■□□ 2.26
PABPC1-217ENST00000521067 FAM196AQ6ZSG2 479 aa29.15■■■□□ 2.26
PABPC1-217ENST00000521067 BRD4O60885 1362 aaPredicted RBP29.14■■■□□ 2.26
PABPC1-217ENST00000521067 TCP11L2Q8N4U5 519 aa29.14■■■□□ 2.26
PABPC1-217ENST00000521067 LMO7Q8WWI1 1683 aa29.13■■■□□ 2.25
PABPC1-217ENST00000521067 EZH2Q15910 746 aaKnown RBP29.13■■■□□ 2.25
PABPC1-217ENST00000521067 EVC2Q86UK5 1308 aa29.13■■■□□ 2.25
PABPC1-217ENST00000521067 DISP2A7MBM2 1401 aa29.11■■■□□ 2.25
PABPC1-217ENST00000521067 CAMKK2Q96RR4 588 aa29.11■■■□□ 2.25
PABPC1-217ENST00000521067 ROCK2O75116 1388 aaKnown RBP29.11■■■□□ 2.25
PABPC1-217ENST00000521067 TRPM1Q7Z4N2 1603 aa29.1■■■□□ 2.25
PABPC1-217ENST00000521067 RGPD1P0DJD0 1748 aa29.09■■■□□ 2.25
PABPC1-217ENST00000521067 PDE3BQ13370 1112 aa29.09■■■□□ 2.25
PABPC1-217ENST00000521067 ZBTB7CA1YPR0 619 aa29.08■■■□□ 2.25
PABPC1-217ENST00000521067 COL5A2P05997 1499 aaPredicted RBP29.08■■■□□ 2.25
PABPC1-217ENST00000521067 THRAP3Q9Y2W1 955 aaKnown RBP29.07■■■□□ 2.24
PABPC1-217ENST00000521067 APBA3O96018 575 aa29.06■■■□□ 2.24
PABPC1-217ENST00000521067 R3HDM1Q15032 1099 aaKnown RBP29.06■■■□□ 2.24
PABPC1-217ENST00000521067 TNS1Q9HBL0 1735 aaKnown RBP29.06■■■□□ 2.24
PABPC1-217ENST00000521067 AATKQ6ZMQ8 1374 aa29.05■■■□□ 2.24
PABPC1-217ENST00000521067 AXIN2Q9Y2T1 843 aa29.05■■■□□ 2.24
PABPC1-217ENST00000521067 SLIT3O75094 1523 aa29.04■■■□□ 2.24
PABPC1-217ENST00000521067 TTC21BQ7Z4L5 1316 aa29.04■■■□□ 2.24
PABPC1-217ENST00000521067 ZNF692Q9BU19 519 aaPredicted RBP29.03■■■□□ 2.24
PABPC1-217ENST00000521067 CRB1P82279 1406 aa29.01■■■□□ 2.23
PABPC1-217ENST00000521067 PIK3C2AO00443 1686 aa29■■■□□ 2.23
PABPC1-217ENST00000521067 ARHGEF25Q86VW2 580 aa28.99■■■□□ 2.23
PABPC1-217ENST00000521067 CPSF1Q10570 1443 aaKnown RBP28.98■■■□□ 2.23
PABPC1-217ENST00000521067 LRP5O75197 1615 aa28.98■■■□□ 2.23
PABPC1-217ENST00000521067 SOX12O15370 315 aa28.96■■■□□ 2.23
PABPC1-217ENST00000521067 TOM1L2Q6ZVM7 507 aa28.96■■■□□ 2.23
PABPC1-217ENST00000521067 COL18A1P39060 1754 aa28.96■■■□□ 2.23
PABPC1-217ENST00000521067 TTC21AQ8NDW8 1320 aa28.94■■■□□ 2.22
PABPC1-217ENST00000521067 PARD3Q8TEW0 1356 aa28.93■■■□□ 2.22
PABPC1-217ENST00000521067 KCNH5Q8NCM2 988 aa28.93■■■□□ 2.22
PABPC1-217ENST00000521067 WDR17Q8IZU2 1322 aa28.93■■■□□ 2.22
PABPC1-217ENST00000521067 KTN1Q86UP2 1357 aaKnown RBP28.92■■■□□ 2.22
PABPC1-217ENST00000521067 CARD11Q9BXL7 1154 aa28.92■■■□□ 2.22
PABPC1-217ENST00000521067 PARP4Q9UKK3 1724 aaKnown RBP28.91■■■□□ 2.22
PABPC1-217ENST00000521067 DDB1Q16531 1140 aa28.9■■■□□ 2.22
PABPC1-217ENST00000521067 SBNO2Q9Y2G9 1366 aa28.89■■■□□ 2.22
PABPC1-217ENST00000521067 PTF1AQ7RTS3 328 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms