RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 ABCA3Q99758 1704 aa24.15■■□□□ 1.46
TRAM1-204ENST00000521049 PSDA5PKW4 1024 aaPredicted RBP24.15■■□□□ 1.46
TRAM1-204ENST00000521049 PAK3O75914 559 aaPredicted RBP24.15■■□□□ 1.46
TRAM1-204ENST00000521049 EN1Q05925 392 aaPredicted RBP24.15■■□□□ 1.46
TRAM1-204ENST00000521049 DCAF11Q8TEB1 546 aa24.15■■□□□ 1.46
TRAM1-204ENST00000521049 PRDM11Q9NQV5 511 aa24.14■■□□□ 1.45
TRAM1-204ENST00000521049 TULP4Q9NRJ4 1543 aa24.13■■□□□ 1.45
TRAM1-204ENST00000521049 TRPM3Q9HCF6 1732 aaPredicted RBP24.13■■□□□ 1.45
TRAM1-204ENST00000521049 FAM182BQ5T319 152 aa24.12■■□□□ 1.45
TRAM1-204ENST00000521049 COL14A1Q05707 1796 aaKnown RBP24.11■■□□□ 1.45
TRAM1-204ENST00000521049 RAB3GAP2Q9H2M9 1393 aa24.11■■□□□ 1.45
TRAM1-204ENST00000521049 LRP5O75197 1615 aa24.1■■□□□ 1.45
TRAM1-204ENST00000521049 NRAPQ86VF7 1730 aa24.1■■□□□ 1.45
TRAM1-204ENST00000521049 ALS2Q96Q42 1657 aa24.1■■□□□ 1.45
TRAM1-204ENST00000521049 NUDT16Q96DE0 195 aaKnown RBP24.09■■□□□ 1.45
TRAM1-204ENST00000521049 SPATA31A1Q5TZJ5 1347 aa24.09■■□□□ 1.45
TRAM1-204ENST00000521049 FAM196AQ6ZSG2 479 aa24.07■■□□□ 1.44
TRAM1-204ENST00000521049 DISP2A7MBM2 1401 aa24.07■■□□□ 1.44
TRAM1-204ENST00000521049 KIAA0232Q92628 1395 aa24.05■■□□□ 1.44
TRAM1-204ENST00000521049 R3HDM1Q15032 1099 aaKnown RBP24.05■■□□□ 1.44
TRAM1-204ENST00000521049 CHRNA2Q15822 529 aa24.04■■□□□ 1.44
TRAM1-204ENST00000521049 EZH2Q15910 746 aaKnown RBP24.04■■□□□ 1.44
TRAM1-204ENST00000521049 CAMKK2Q96RR4 588 aa24.04■■□□□ 1.44
TRAM1-204ENST00000521049 CDK19Q9BWU1 502 aa24.03■■□□□ 1.44
TRAM1-204ENST00000521049 STRN4Q9NRL3 753 aa24.03■■□□□ 1.44
TRAM1-204ENST00000521049 ZC3H6P61129 1189 aaKnown RBP24.02■■□□□ 1.44
TRAM1-204ENST00000521049 TRIM37O94972 964 aa24.01■■□□□ 1.43
TRAM1-204ENST00000521049 NBPF8Q3BBV2 869 aa24.01■■□□□ 1.43
TRAM1-204ENST00000521049 BARGINQ6ZT62 677 aa24.01■■□□□ 1.43
TRAM1-204ENST00000521049 CCDC61Q9Y6R9 512 aa24.01■■□□□ 1.43
TRAM1-204ENST00000521049 THSD7AQ9UPZ6 1657 aa24.01■■□□□ 1.43
TRAM1-204ENST00000521049 EVA1CP58658 441 aa24■■□□□ 1.43
TRAM1-204ENST00000521049 ATP7BP35670 1465 aa24■■□□□ 1.43
TRAM1-204ENST00000521049 RGPD1P0DJD0 1748 aa23.99■■□□□ 1.43
TRAM1-204ENST00000521049 PLEKHG3A1L390 1219 aa23.99■■□□□ 1.43
TRAM1-204ENST00000521049 POLR3AO14802 1390 aaPredicted RBP23.99■■□□□ 1.43
TRAM1-204ENST00000521049 APBA3O96018 575 aa23.98■■□□□ 1.43
TRAM1-204ENST00000521049 NUTM2GQ5VZR2 741 aa23.98■■□□□ 1.43
TRAM1-204ENST00000521049 ACEP12821 1306 aa23.98■■□□□ 1.43
TRAM1-204ENST00000521049 PDE3BQ13370 1112 aa23.97■■□□□ 1.43
TRAM1-204ENST00000521049 PARD3Q8TEW0 1356 aa23.97■■□□□ 1.43
TRAM1-204ENST00000521049 CRYBG1Q9Y4K1 1723 aa23.97■■□□□ 1.43
TRAM1-204ENST00000521049 USP35Q9P2H5 1018 aa23.96■■□□□ 1.43
TRAM1-204ENST00000521049 ABTB2Q8N961 1025 aa23.95■■□□□ 1.42
TRAM1-204ENST00000521049 LARP1Q6PKG0 1096 aaKnown RBP23.93■■□□□ 1.42
TRAM1-204ENST00000521049 TCP11L2Q8N4U5 519 aa23.93■■□□□ 1.42
TRAM1-204ENST00000521049 SSH2Q76I76 1423 aa23.93■■□□□ 1.42
TRAM1-204ENST00000521049 CPDO75976 1380 aa23.92■■□□□ 1.42
TRAM1-204ENST00000521049 THRAP3Q9Y2W1 955 aaKnown RBP23.92■■□□□ 1.42
TRAM1-204ENST00000521049 NLRP13Q86W25 1043 aa23.91■■□□□ 1.42
TRAM1-204ENST00000521049 NBPF14Q5TI25 921 aa23.9■■□□□ 1.42
TRAM1-204ENST00000521049 ITSN1Q15811 1721 aa23.9■■□□□ 1.42
TRAM1-204ENST00000521049 USP19O94966 1318 aa23.89■■□□□ 1.42
TRAM1-204ENST00000521049 GCP02774 474 aa23.89■■□□□ 1.41
TRAM1-204ENST00000521049 TNS1Q9HBL0 1735 aaKnown RBP23.89■■□□□ 1.41
TRAM1-204ENST00000521049 ARHGEF28Q8N1W1 1705 aaKnown RBP23.88■■□□□ 1.41
TRAM1-204ENST00000521049 C11orf95C9JLR9 678 aaPredicted RBP23.88■■□□□ 1.41
TRAM1-204ENST00000521049 CAMTA1Q9Y6Y1 1673 aa23.88■■□□□ 1.41
TRAM1-204ENST00000521049 PHRF1Q9P1Y6 1649 aaKnown RBP23.86■■□□□ 1.41
TRAM1-204ENST00000521049 NBPF1Q3BBV0 1214 aa23.85■■□□□ 1.41
TRAM1-204ENST00000521049 BRD4O60885 1362 aaPredicted RBP23.84■■□□□ 1.41
TRAM1-204ENST00000521049 SRPK2P78362 688 aaKnown RBP23.84■■□□□ 1.41
TRAM1-204ENST00000521049 PPIP5K1Q6PFW1 1433 aa23.8■■□□□ 1.4
TRAM1-204ENST00000521049 NRKQ7Z2Y5 1582 aa23.8■■□□□ 1.4
TRAM1-204ENST00000521049 CABP2Q9NPB3 220 aa23.8■■□□□ 1.4
TRAM1-204ENST00000521049 CENPJQ9HC77 1338 aaPredicted RBP23.8■■□□□ 1.4
TRAM1-204ENST00000521049 TOPAZ1Q8N9V7 1692 aa23.79■■□□□ 1.4
TRAM1-204ENST00000521049 NLRP6P59044 892 aa23.78■■□□□ 1.4
TRAM1-204ENST00000521049 SPON1Q9HCB6 807 aa23.78■■□□□ 1.4
TRAM1-204ENST00000521049 LMO7Q8WWI1 1683 aa23.78■■□□□ 1.4
TRAM1-204ENST00000521049 CRB1P82279 1406 aa23.77■■□□□ 1.4
TRAM1-204ENST00000521049 COL5A2P05997 1499 aaPredicted RBP23.77■■□□□ 1.4
TRAM1-204ENST00000521049 PLSCR1O15162 318 aa23.77■■□□□ 1.4
TRAM1-204ENST00000521049 CABP1Q9NZU7 370 aa23.77■■□□□ 1.4
TRAM1-204ENST00000521049 AATKQ6ZMQ8 1374 aa23.77■■□□□ 1.4
TRAM1-204ENST00000521049 KCNQ2O43526 872 aa23.76■■□□□ 1.39
TRAM1-204ENST00000521049 KIAA1210Q9ULL0 1709 aa23.76■■□□□ 1.39
TRAM1-204ENST00000521049 DDB1Q16531 1140 aa23.73■■□□□ 1.39
TRAM1-204ENST00000521049 RREB1Q92766 1687 aa23.73■■□□□ 1.39
TRAM1-204ENST00000521049 ZBTB7CA1YPR0 619 aa23.72■■□□□ 1.39
TRAM1-204ENST00000521049 TOM1L2Q6ZVM7 507 aa23.72■■□□□ 1.39
TRAM1-204ENST00000521049 PPP1R1BQ9UD71 204 aaPredicted RBP23.72■■□□□ 1.39
TRAM1-204ENST00000521049 OVOS2A0A0G2JMS6 1433 aa23.72■■□□□ 1.39
TRAM1-204ENST00000521049 OVOS2A0A0J9YW53 1432 aa23.72■■□□□ 1.39
TRAM1-204ENST00000521049 USP6P35125 1406 aa23.72■■□□□ 1.39
TRAM1-204ENST00000521049 OVOS2Q6IE36 1432 aa23.72■■□□□ 1.39
TRAM1-204ENST00000521049 YY1P25490 414 aa23.71■■□□□ 1.39
TRAM1-204ENST00000521049 BCL11BQ9C0K0 894 aaPredicted RBP23.71■■□□□ 1.39
TRAM1-204ENST00000521049 CDCA7Q9BWT1 371 aaPredicted RBP23.7■■□□□ 1.38
TRAM1-204ENST00000521049 NUP188Q5SRE5 1749 aa23.7■■□□□ 1.38
TRAM1-204ENST00000521049 DCAF8L1A6NGE4 600 aa23.69■■□□□ 1.38
TRAM1-204ENST00000521049 PARP4Q9UKK3 1724 aaKnown RBP23.69■■□□□ 1.38
TRAM1-204ENST00000521049 ZNF692Q9BU19 519 aaPredicted RBP23.68■■□□□ 1.38
TRAM1-204ENST00000521049 AXIN2Q9Y2T1 843 aa23.68■■□□□ 1.38
TRAM1-204ENST00000521049 WDR17Q8IZU2 1322 aa23.67■■□□□ 1.38
TRAM1-204ENST00000521049 NINLQ9Y2I6 1382 aa23.66■■□□□ 1.38
TRAM1-204ENST00000521049 EVC2Q86UK5 1308 aa23.66■■□□□ 1.38
TRAM1-204ENST00000521049 SLIT3O75094 1523 aa23.66■■□□□ 1.38
TRAM1-204ENST00000521049 ARHGEF25Q86VW2 580 aa23.66■■□□□ 1.38
TRAM1-204ENST00000521049 KCNH5Q8NCM2 988 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms