RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 R3HDM1Q15032 1099 aaKnown RBP16.85■□□□□ 0.29
MRPS28-206ENST00000520946 SPATA31A5Q5VU36 1347 aa16.85■□□□□ 0.29
MRPS28-206ENST00000520946 SPATA31A7Q8IWB4 1347 aa16.85■□□□□ 0.29
MRPS28-206ENST00000520946 SRCAPQ6ZRS2 3230 aa16.85■□□□□ 0.29
MRPS28-206ENST00000520946 DLC1Q96QB1 1528 aa16.84■□□□□ 0.29
MRPS28-206ENST00000520946 USP35Q9P2H5 1018 aa16.83■□□□□ 0.28
MRPS28-206ENST00000520946 COL14A1Q05707 1796 aaKnown RBP16.82■□□□□ 0.28
MRPS28-206ENST00000520946 ABCA3Q99758 1704 aa16.82■□□□□ 0.28
MRPS28-206ENST00000520946 FAM196AQ6ZSG2 479 aa16.82■□□□□ 0.28
MRPS28-206ENST00000520946 TRIM37O94972 964 aa16.81■□□□□ 0.28
MRPS28-206ENST00000520946 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
MRPS28-206ENST00000520946 PDE3BQ13370 1112 aa16.81■□□□□ 0.28
MRPS28-206ENST00000520946 CHRNA2Q15822 529 aa16.81■□□□□ 0.28
MRPS28-206ENST00000520946 STAC3Q96MF2 364 aa16.81■□□□□ 0.28
MRPS28-206ENST00000520946 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
MRPS28-206ENST00000520946 APBA3O96018 575 aa16.8■□□□□ 0.28
MRPS28-206ENST00000520946 EZH2Q15910 746 aaKnown RBP16.8■□□□□ 0.28
MRPS28-206ENST00000520946 NUTM2GQ5VZR2 741 aa16.8■□□□□ 0.28
MRPS28-206ENST00000520946 NUDT16Q96DE0 195 aaKnown RBP16.8■□□□□ 0.28
MRPS28-206ENST00000520946 LRP5O75197 1615 aa16.8■□□□□ 0.28
MRPS28-206ENST00000520946 TULP4Q9NRJ4 1543 aa16.79■□□□□ 0.28
MRPS28-206ENST00000520946 KIAA0232Q92628 1395 aa16.78■□□□□ 0.28
MRPS28-206ENST00000520946 SPATA31A1Q5TZJ5 1347 aa16.78■□□□□ 0.28
MRPS28-206ENST00000520946 ADGRB2O60241 1585 aa16.78■□□□□ 0.28
MRPS28-206ENST00000520946 NBPF8Q3BBV2 869 aa16.78■□□□□ 0.28
MRPS28-206ENST00000520946 NBPF14Q5TI25 921 aa16.78■□□□□ 0.28
MRPS28-206ENST00000520946 RGPD1P0DJD0 1748 aa16.78■□□□□ 0.28
MRPS28-206ENST00000520946 NRAPQ86VF7 1730 aa16.77■□□□□ 0.28
MRPS28-206ENST00000520946 RAB3GAP2Q9H2M9 1393 aa16.77■□□□□ 0.27
MRPS28-206ENST00000520946 TRPM3Q9HCF6 1732 aaPredicted RBP16.76■□□□□ 0.27
MRPS28-206ENST00000520946 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
MRPS28-206ENST00000520946 CDK19Q9BWU1 502 aa16.76■□□□□ 0.27
MRPS28-206ENST00000520946 ABTB2Q8N961 1025 aa16.75■□□□□ 0.27
MRPS28-206ENST00000520946 ALS2Q96Q42 1657 aa16.75■□□□□ 0.27
MRPS28-206ENST00000520946 ADGRB1O14514 1584 aa16.74■□□□□ 0.27
MRPS28-206ENST00000520946 ZBTB7CA1YPR0 619 aa16.73■□□□□ 0.27
MRPS28-206ENST00000520946 CAMKK2Q96RR4 588 aa16.73■□□□□ 0.27
MRPS28-206ENST00000520946 PPP1R1BQ9UD71 204 aaPredicted RBP16.73■□□□□ 0.27
MRPS28-206ENST00000520946 ACEP12821 1306 aa16.72■□□□□ 0.27
MRPS28-206ENST00000520946 DISP2A7MBM2 1401 aa16.72■□□□□ 0.27
MRPS28-206ENST00000520946 TCP11L2Q8N4U5 519 aa16.72■□□□□ 0.27
MRPS28-206ENST00000520946 CCDC61Q9Y6R9 512 aa16.72■□□□□ 0.27
MRPS28-206ENST00000520946 BARGINQ6ZT62 677 aa16.71■□□□□ 0.27
MRPS28-206ENST00000520946 PARD3Q8TEW0 1356 aa16.71■□□□□ 0.27
MRPS28-206ENST00000520946 ATP7BP35670 1465 aa16.71■□□□□ 0.27
MRPS28-206ENST00000520946 SRPK2P78362 688 aaKnown RBP16.7■□□□□ 0.26
MRPS28-206ENST00000520946 LARP1Q6PKG0 1096 aaKnown RBP16.7■□□□□ 0.26
MRPS28-206ENST00000520946 NLRP13Q86W25 1043 aa16.7■□□□□ 0.26
MRPS28-206ENST00000520946 ITSN1Q15811 1721 aa16.7■□□□□ 0.26
MRPS28-206ENST00000520946 THSD7AQ9UPZ6 1657 aa16.69■□□□□ 0.26
MRPS28-206ENST00000520946 C11orf95C9JLR9 678 aaPredicted RBP16.68■□□□□ 0.26
MRPS28-206ENST00000520946 SSH2Q76I76 1423 aa16.68■□□□□ 0.26
MRPS28-206ENST00000520946 THRAP3Q9Y2W1 955 aaKnown RBP16.67■□□□□ 0.26
MRPS28-206ENST00000520946 PLEKHG3A1L390 1219 aa16.66■□□□□ 0.26
MRPS28-206ENST00000520946 YY1P25490 414 aa16.66■□□□□ 0.26
MRPS28-206ENST00000520946 SPON1Q9HCB6 807 aa16.66■□□□□ 0.26
MRPS28-206ENST00000520946 GCP02774 474 aa16.65■□□□□ 0.26
MRPS28-206ENST00000520946 TNS1Q9HBL0 1735 aaKnown RBP16.65■□□□□ 0.26
MRPS28-206ENST00000520946 POLR3AO14802 1390 aaPredicted RBP16.64■□□□□ 0.26
MRPS28-206ENST00000520946 CRYBG1Q9Y4K1 1723 aa16.63■□□□□ 0.25
MRPS28-206ENST00000520946 PHRF1Q9P1Y6 1649 aaKnown RBP16.63■□□□□ 0.25
MRPS28-206ENST00000520946 NLRP6P59044 892 aa16.62■□□□□ 0.25
MRPS28-206ENST00000520946 TOM1L2Q6ZVM7 507 aa16.62■□□□□ 0.25
MRPS28-206ENST00000520946 CPDO75976 1380 aa16.62■□□□□ 0.25
MRPS28-206ENST00000520946 ARHGEF28Q8N1W1 1705 aaKnown RBP16.62■□□□□ 0.25
MRPS28-206ENST00000520946 KCNQ2O43526 872 aa16.61■□□□□ 0.25
MRPS28-206ENST00000520946 CABP2Q9NPB3 220 aa16.61■□□□□ 0.25
MRPS28-206ENST00000520946 CAMTA1Q9Y6Y1 1673 aa16.6■□□□□ 0.25
MRPS28-206ENST00000520946 DDB1Q16531 1140 aa16.6■□□□□ 0.25
MRPS28-206ENST00000520946 PPIP5K1Q6PFW1 1433 aa16.6■□□□□ 0.25
MRPS28-206ENST00000520946 USP19O94966 1318 aa16.59■□□□□ 0.25
MRPS28-206ENST00000520946 CENPJQ9HC77 1338 aaPredicted RBP16.59■□□□□ 0.25
MRPS28-206ENST00000520946 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.24
MRPS28-206ENST00000520946 NBPF1Q3BBV0 1214 aa16.58■□□□□ 0.24
MRPS28-206ENST00000520946 BCL11BQ9C0K0 894 aaPredicted RBP16.58■□□□□ 0.24
MRPS28-206ENST00000520946 CABP1Q9NZU7 370 aa16.58■□□□□ 0.24
MRPS28-206ENST00000520946 CRB1P82279 1406 aa16.58■□□□□ 0.24
MRPS28-206ENST00000520946 OVOS2A0A0G2JMS6 1433 aa16.57■□□□□ 0.24
MRPS28-206ENST00000520946 OVOS2A0A0J9YW53 1432 aa16.57■□□□□ 0.24
MRPS28-206ENST00000520946 OVOS2Q6IE36 1432 aa16.57■□□□□ 0.24
MRPS28-206ENST00000520946 NRKQ7Z2Y5 1582 aa16.56■□□□□ 0.24
MRPS28-206ENST00000520946 BRD4O60885 1362 aaPredicted RBP16.56■□□□□ 0.24
MRPS28-206ENST00000520946 CDCA7Q9BWT1 371 aaPredicted RBP16.55■□□□□ 0.24
MRPS28-206ENST00000520946 COL5A2P05997 1499 aaPredicted RBP16.54■□□□□ 0.24
MRPS28-206ENST00000520946 PLSCR1O15162 318 aa16.54■□□□□ 0.24
MRPS28-206ENST00000520946 SOX12O15370 315 aa16.54■□□□□ 0.24
MRPS28-206ENST00000520946 AATKQ6ZMQ8 1374 aa16.53■□□□□ 0.24
MRPS28-206ENST00000520946 NINLQ9Y2I6 1382 aa16.53■□□□□ 0.24
MRPS28-206ENST00000520946 TOPAZ1Q8N9V7 1692 aa16.53■□□□□ 0.24
MRPS28-206ENST00000520946 RREB1Q92766 1687 aa16.53■□□□□ 0.24
MRPS28-206ENST00000520946 EVC2Q86UK5 1308 aa16.52■□□□□ 0.24
MRPS28-206ENST00000520946 KCNH5Q8NCM2 988 aa16.52■□□□□ 0.24
MRPS28-206ENST00000520946 STK32BQ9NY57 414 aa16.52■□□□□ 0.24
MRPS28-206ENST00000520946 NUP188Q5SRE5 1749 aa16.52■□□□□ 0.24
MRPS28-206ENST00000520946 LMO7Q8WWI1 1683 aa16.51■□□□□ 0.23
MRPS28-206ENST00000520946 EXOC5O00471 708 aa16.51■□□□□ 0.23
MRPS28-206ENST00000520946 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
MRPS28-206ENST00000520946 USP6P35125 1406 aa16.5■□□□□ 0.23
MRPS28-206ENST00000520946 PARP4Q9UKK3 1724 aaKnown RBP16.5■□□□□ 0.23
MRPS28-206ENST00000520946 KIAA1210Q9ULL0 1709 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms