RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 POLR3AO14802 1390 aaPredicted RBP15.47■□□□□ 0.07
PVT1-209ENST00000520913 UNC5CLQ8IV45 518 aa15.46■□□□□ 0.07
PVT1-209ENST00000520913 CABLES1Q8TDN4 633 aa15.46■□□□□ 0.07
PVT1-209ENST00000520913 SIN3AQ96ST3 1273 aa15.46■□□□□ 0.07
PVT1-209ENST00000520913 CDK19Q9BWU1 502 aa15.46■□□□□ 0.07
PVT1-209ENST00000520913 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
PVT1-209ENST00000520913 GJD4Q96KN9 370 aaPredicted RBP15.45■□□□□ 0.06
PVT1-209ENST00000520913 PPIP5K1Q6PFW1 1433 aa15.44■□□□□ 0.06
PVT1-209ENST00000520913 ROCK2O75116 1388 aaKnown RBP15.44■□□□□ 0.06
PVT1-209ENST00000520913 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
PVT1-209ENST00000520913 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
PVT1-209ENST00000520913 CCDC61Q9Y6R9 512 aa15.42■□□□□ 0.06
PVT1-209ENST00000520913 MON2Q7Z3U7 1717 aa15.42■□□□□ 0.06
PVT1-209ENST00000520913 PIK3C2AO00443 1686 aa15.41■□□□□ 0.06
PVT1-209ENST00000520913 SRPK2P78362 688 aaKnown RBP15.41■□□□□ 0.06
PVT1-209ENST00000520913 LMO7Q8WWI1 1683 aa15.41■□□□□ 0.06
PVT1-209ENST00000520913 THSD7AQ9UPZ6 1657 aa15.41■□□□□ 0.06
PVT1-209ENST00000520913 ACEP12821 1306 aa15.41■□□□□ 0.06
PVT1-209ENST00000520913 VPS72Q15906 364 aa15.4■□□□□ 0.06
PVT1-209ENST00000520913 PLEKHG3A1L390 1219 aa15.39■□□□□ 0.05
PVT1-209ENST00000520913 BRD4O60885 1362 aaPredicted RBP15.38■□□□□ 0.05
PVT1-209ENST00000520913 TONSLQ96HA7 1378 aa15.38■□□□□ 0.05
PVT1-209ENST00000520913 RGPD1P0DJD0 1748 aa15.38■□□□□ 0.05
PVT1-209ENST00000520913 USP6P35125 1406 aa15.37■□□□□ 0.05
PVT1-209ENST00000520913 FAM83GA6ND36 823 aa15.37■□□□□ 0.05
PVT1-209ENST00000520913 NBPF8Q3BBV2 869 aa15.37■□□□□ 0.05
PVT1-209ENST00000520913 CCDC9Q9Y3X0 531 aaKnown RBP15.37■□□□□ 0.05
PVT1-209ENST00000520913 EVC2Q86UK5 1308 aa15.37■□□□□ 0.05
PVT1-209ENST00000520913 WNK3Q9BYP7 1800 aa15.36■□□□□ 0.05
PVT1-209ENST00000520913 USP54Q70EL1 1684 aa15.36■□□□□ 0.05
PVT1-209ENST00000520913 TRIM26Q12899 539 aaPredicted RBP15.36■□□□□ 0.05
PVT1-209ENST00000520913 CABP2Q9NPB3 220 aa15.36■□□□□ 0.05
PVT1-209ENST00000520913 BTG4Q9NY30 223 aa15.36■□□□□ 0.05
PVT1-209ENST00000520913 SLIT3O75094 1523 aa15.36■□□□□ 0.05
PVT1-209ENST00000520913 KIAA0232Q92628 1395 aa15.36■□□□□ 0.05
PVT1-209ENST00000520913 SBNO2Q9Y2G9 1366 aa15.36■□□□□ 0.05
PVT1-209ENST00000520913 PRDM11Q9NQV5 511 aa15.35■□□□□ 0.05
PVT1-209ENST00000520913 USP19O94966 1318 aa15.35■□□□□ 0.05
PVT1-209ENST00000520913 TNS1Q9HBL0 1735 aaKnown RBP15.34■□□□□ 0.05
PVT1-209ENST00000520913 BLMP54132 1417 aaPredicted RBP15.33■□□□□ 0.04
PVT1-209ENST00000520913 RGPD5Q99666 1765 aa15.32■□□□□ 0.04
PVT1-209ENST00000520913 SEPT12Q8IYM1 358 aa15.32■□□□□ 0.04
PVT1-209ENST00000520913 ABTB2Q8N961 1025 aa15.32■□□□□ 0.04
PVT1-209ENST00000520913 CPDO75976 1380 aa15.32■□□□□ 0.04
PVT1-209ENST00000520913 PARP4Q9UKK3 1724 aaKnown RBP15.31■□□□□ 0.04
PVT1-209ENST00000520913 ONECUT3O60422 494 aaPredicted RBP15.31■□□□□ 0.04
PVT1-209ENST00000520913 NUTM2GQ5VZR2 741 aa15.31■□□□□ 0.04
PVT1-209ENST00000520913 CCDC125Q86Z20 511 aa15.31■□□□□ 0.04
PVT1-209ENST00000520913 CAMTA1Q9Y6Y1 1673 aa15.31■□□□□ 0.04
PVT1-209ENST00000520913 COL18A1P39060 1754 aa15.31■□□□□ 0.04
PVT1-209ENST00000520913 A0A0G2JS52 829 aa15.3■□□□□ 0.04
PVT1-209ENST00000520913 LTN1O94822 1766 aa15.3■□□□□ 0.04
PVT1-209ENST00000520913 MYT1Q01538 1121 aa15.3■□□□□ 0.04
PVT1-209ENST00000520913 SPATA31A5Q5VU36 1347 aa15.3■□□□□ 0.04
PVT1-209ENST00000520913 SSH2Q76I76 1423 aa15.3■□□□□ 0.04
PVT1-209ENST00000520913 SPATA31A7Q8IWB4 1347 aa15.3■□□□□ 0.04
PVT1-209ENST00000520913 CABP1Q9NZU7 370 aa15.3■□□□□ 0.04
PVT1-209ENST00000520913 ZC3H6P61129 1189 aaKnown RBP15.29■□□□□ 0.04
PVT1-209ENST00000520913 CHRNA2Q15822 529 aa15.29■□□□□ 0.04
PVT1-209ENST00000520913 FAM98CQ17RN3 349 aaKnown RBP15.29■□□□□ 0.04
PVT1-209ENST00000520913 NLRP13Q86W25 1043 aa15.29■□□□□ 0.04
PVT1-209ENST00000520913 CARD11Q9BXL7 1154 aa15.29■□□□□ 0.04
PVT1-209ENST00000520913 COL5A2P05997 1499 aaPredicted RBP15.28■□□□□ 0.04
PVT1-209ENST00000520913 KRT27Q7Z3Y8 459 aa15.28■□□□□ 0.04
PVT1-209ENST00000520913 CPSF1Q10570 1443 aaKnown RBP15.27■□□□□ 0.04
PVT1-209ENST00000520913 ABCC6O95255 1503 aa15.27■□□□□ 0.03
PVT1-209ENST00000520913 SPATA31A1Q5TZJ5 1347 aa15.26■□□□□ 0.03
PVT1-209ENST00000520913 LRRC37A3O60309 1634 aa15.26■□□□□ 0.03
PVT1-209ENST00000520913 STRN4Q9NRL3 753 aa15.26■□□□□ 0.03
PVT1-209ENST00000520913 NFAT5O94916 1531 aa15.25■□□□□ 0.03
PVT1-209ENST00000520913 KTN1Q86UP2 1357 aaKnown RBP15.24■□□□□ 0.03
PVT1-209ENST00000520913 TTC21AQ8NDW8 1320 aa15.24■□□□□ 0.03
PVT1-209ENST00000520913 GCP02774 474 aa15.24■□□□□ 0.03
PVT1-209ENST00000520913 NLRP6P59044 892 aa15.24■□□□□ 0.03
PVT1-209ENST00000520913 SF3B2Q13435 895 aaKnown RBP15.24■□□□□ 0.03
PVT1-209ENST00000520913 ZNF692Q9BU19 519 aaPredicted RBP15.24■□□□□ 0.03
PVT1-209ENST00000520913 CD163L1Q9NR16 1453 aa15.24■□□□□ 0.03
PVT1-209ENST00000520913 SBF2Q86WG5 1849 aa15.22■□□□□ 0.03
PVT1-209ENST00000520913 TTC21BQ7Z4L5 1316 aa15.22■□□□□ 0.03
PVT1-209ENST00000520913 CRB1P82279 1406 aa15.22■□□□□ 0.03
PVT1-209ENST00000520913 AATKQ6ZMQ8 1374 aa15.22■□□□□ 0.03
PVT1-209ENST00000520913 RREB1Q92766 1687 aa15.22■□□□□ 0.03
PVT1-209ENST00000520913 EVA1CP58658 441 aa15.21■□□□□ 0.03
PVT1-209ENST00000520913 FAM208AQ9UK61 1670 aaKnown RBP15.21■□□□□ 0.03
PVT1-209ENST00000520913 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
PVT1-209ENST00000520913 KIF20BQ96Q89 1820 aa15.2■□□□□ 0.02
PVT1-209ENST00000520913 EDC4Q6P2E9 1401 aaKnown RBP15.2■□□□□ 0.02
PVT1-209ENST00000520913 SRCAPQ6ZRS2 3230 aa15.2■□□□□ 0.02
PVT1-209ENST00000520913 RGPD3A6NKT7 1758 aaPredicted RBP15.19■□□□□ 0.02
PVT1-209ENST00000520913 RGPD4Q7Z3J3 1758 aa15.19■□□□□ 0.02
PVT1-209ENST00000520913 LARP1Q6PKG0 1096 aaKnown RBP15.19■□□□□ 0.02
PVT1-209ENST00000520913 BARGINQ6ZT62 677 aa15.19■□□□□ 0.02
PVT1-209ENST00000520913 USP35Q9P2H5 1018 aa15.19■□□□□ 0.02
PVT1-209ENST00000520913 ZRANB1Q9UGI0 708 aa15.19■□□□□ 0.02
PVT1-209ENST00000520913 NINLQ9Y2I6 1382 aa15.19■□□□□ 0.02
PVT1-209ENST00000520913 MYOM1P52179 1685 aa15.19■□□□□ 0.02
PVT1-209ENST00000520913 DISP2A7MBM2 1401 aa15.18■□□□□ 0.02
PVT1-209ENST00000520913 ZBTB7CA1YPR0 619 aa15.18■□□□□ 0.02
PVT1-209ENST00000520913 KCNH5Q8NCM2 988 aa15.18■□□□□ 0.02
PVT1-209ENST00000520913 THRAP3Q9Y2W1 955 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms