RNA–Protein interactions for RNA: ENST00000520522.1

CTNNA1-224, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 390 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-224ENST00000520522 ITSN1Q15811 1721 aa13□□□□□ -0.33
CTNNA1-224ENST00000520522 ATP7BP35670 1465 aa13□□□□□ -0.33
CTNNA1-224ENST00000520522 BLMP54132 1417 aaPredicted RBP13□□□□□ -0.33
CTNNA1-224ENST00000520522 ONECUT3O60422 494 aaPredicted RBP13□□□□□ -0.33
CTNNA1-224ENST00000520522 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
CTNNA1-224ENST00000520522 NRAPQ86VF7 1730 aa12.99□□□□□ -0.33
CTNNA1-224ENST00000520522 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
CTNNA1-224ENST00000520522 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
CTNNA1-224ENST00000520522 COL14A1Q05707 1796 aaKnown RBP12.99□□□□□ -0.33
CTNNA1-224ENST00000520522 CRYBG1Q9Y4K1 1723 aa12.99□□□□□ -0.33
CTNNA1-224ENST00000520522 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
CTNNA1-224ENST00000520522 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
CTNNA1-224ENST00000520522 NGDNQ8NEJ9 315 aaKnown RBP12.97□□□□□ -0.33
CTNNA1-224ENST00000520522 TOPAZ1Q8N9V7 1692 aa12.96□□□□□ -0.33
CTNNA1-224ENST00000520522 PLEKHG5O94827 1062 aa12.96□□□□□ -0.33
CTNNA1-224ENST00000520522 CCDC9Q9Y3X0 531 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-224ENST00000520522 KRT27Q7Z3Y8 459 aa12.95□□□□□ -0.34
CTNNA1-224ENST00000520522 NUDT16Q96DE0 195 aaKnown RBP12.95□□□□□ -0.34
CTNNA1-224ENST00000520522 BTG4Q9NY30 223 aa12.95□□□□□ -0.34
CTNNA1-224ENST00000520522 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-224ENST00000520522 PHRF1Q9P1Y6 1649 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-224ENST00000520522 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
CTNNA1-224ENST00000520522 SF3B2Q13435 895 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-224ENST00000520522 CDK19Q9BWU1 502 aa12.92□□□□□ -0.34
CTNNA1-224ENST00000520522 PRDM11Q9NQV5 511 aa12.92□□□□□ -0.34
CTNNA1-224ENST00000520522 SPATA31A5Q5VU36 1347 aa12.91□□□□□ -0.34
CTNNA1-224ENST00000520522 SPATA31A7Q8IWB4 1347 aa12.91□□□□□ -0.34
CTNNA1-224ENST00000520522 PLEKHG3A1L390 1219 aa12.91□□□□□ -0.34
CTNNA1-224ENST00000520522 FAM98CQ17RN3 349 aaKnown RBP12.91□□□□□ -0.34
CTNNA1-224ENST00000520522 CCDC61Q9Y6R9 512 aa12.91□□□□□ -0.34
CTNNA1-224ENST00000520522 THSD7AQ9UPZ6 1657 aa12.91□□□□□ -0.34
CTNNA1-224ENST00000520522 DEFB132Q7Z7B7 95 aa12.9□□□□□ -0.34
CTNNA1-224ENST00000520522 KIAA0232Q92628 1395 aa12.9□□□□□ -0.34
CTNNA1-224ENST00000520522 ACEP12821 1306 aa12.89□□□□□ -0.35
CTNNA1-224ENST00000520522 A0A0G2JS52 829 aa12.89□□□□□ -0.35
CTNNA1-224ENST00000520522 MYT1Q01538 1121 aa12.89□□□□□ -0.35
CTNNA1-224ENST00000520522 NBPF8Q3BBV2 869 aa12.89□□□□□ -0.35
CTNNA1-224ENST00000520522 NRKQ7Z2Y5 1582 aa12.89□□□□□ -0.35
CTNNA1-224ENST00000520522 NBPF1Q3BBV0 1214 aa12.88□□□□□ -0.35
CTNNA1-224ENST00000520522 BRD4O60885 1362 aaPredicted RBP12.88□□□□□ -0.35
CTNNA1-224ENST00000520522 RGPD1P0DJD0 1748 aa12.88□□□□□ -0.35
CTNNA1-224ENST00000520522 USP19O94966 1318 aa12.88□□□□□ -0.35
CTNNA1-224ENST00000520522 CENPJQ9HC77 1338 aaPredicted RBP12.88□□□□□ -0.35
CTNNA1-224ENST00000520522 BAG6P46379 1132 aa12.87□□□□□ -0.35
CTNNA1-224ENST00000520522 DISP2A7MBM2 1401 aa12.87□□□□□ -0.35
CTNNA1-224ENST00000520522 SPATA31A1Q5TZJ5 1347 aa12.87□□□□□ -0.35
CTNNA1-224ENST00000520522 CPDO75976 1380 aa12.86□□□□□ -0.35
CTNNA1-224ENST00000520522 PPIP5K1Q6PFW1 1433 aa12.86□□□□□ -0.35
CTNNA1-224ENST00000520522 QRICH2Q9H0J4 1663 aa12.86□□□□□ -0.35
CTNNA1-224ENST00000520522 ZC3H6P61129 1189 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-224ENST00000520522 CHRNA2Q15822 529 aa12.85□□□□□ -0.35
CTNNA1-224ENST00000520522 LMO7Q8WWI1 1683 aa12.85□□□□□ -0.35
CTNNA1-224ENST00000520522 SSH2Q76I76 1423 aa12.85□□□□□ -0.35
CTNNA1-224ENST00000520522 LRP5O75197 1615 aa12.84□□□□□ -0.35
CTNNA1-224ENST00000520522 SRPK2P78362 688 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-224ENST00000520522 TNS1Q9HBL0 1735 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-224ENST00000520522 NUTM2GQ5VZR2 741 aa12.83□□□□□ -0.36
CTNNA1-224ENST00000520522 NLRP13Q86W25 1043 aa12.83□□□□□ -0.36
CTNNA1-224ENST00000520522 ABTB2Q8N961 1025 aa12.83□□□□□ -0.36
CTNNA1-224ENST00000520522 STRN4Q9NRL3 753 aa12.83□□□□□ -0.36
CTNNA1-224ENST00000520522 CAMTA1Q9Y6Y1 1673 aa12.83□□□□□ -0.36
CTNNA1-224ENST00000520522 USP6P35125 1406 aa12.82□□□□□ -0.36
CTNNA1-224ENST00000520522 TRPM1Q7Z4N2 1603 aa12.82□□□□□ -0.36
CTNNA1-224ENST00000520522 BARGINQ6ZT62 677 aa12.82□□□□□ -0.36
CTNNA1-224ENST00000520522 L3MBTL2Q969R5 705 aa12.82□□□□□ -0.36
CTNNA1-224ENST00000520522 CABP2Q9NPB3 220 aa12.82□□□□□ -0.36
CTNNA1-224ENST00000520522 GCP02774 474 aa12.81□□□□□ -0.36
CTNNA1-224ENST00000520522 SLIT3O75094 1523 aa12.81□□□□□ -0.36
CTNNA1-224ENST00000520522 FAM182BQ5T319 152 aa12.8□□□□□ -0.36
CTNNA1-224ENST00000520522 FAM196AQ6ZSG2 479 aa12.8□□□□□ -0.36
CTNNA1-224ENST00000520522 COL5A2P05997 1499 aaPredicted RBP12.79□□□□□ -0.36
CTNNA1-224ENST00000520522 EVA1CP58658 441 aa12.79□□□□□ -0.36
CTNNA1-224ENST00000520522 EN1Q05925 392 aaPredicted RBP12.79□□□□□ -0.36
CTNNA1-224ENST00000520522 TCP11L2Q8N4U5 519 aa12.79□□□□□ -0.36
CTNNA1-224ENST00000520522 THRAP3Q9Y2W1 955 aaKnown RBP12.79□□□□□ -0.36
CTNNA1-224ENST00000520522 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
CTNNA1-224ENST00000520522 PARD3Q8TEW0 1356 aa12.79□□□□□ -0.36
CTNNA1-224ENST00000520522 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
CTNNA1-224ENST00000520522 CABP1Q9NZU7 370 aa12.78□□□□□ -0.36
CTNNA1-224ENST00000520522 ROCK2O75116 1388 aaKnown RBP12.78□□□□□ -0.36
CTNNA1-224ENST00000520522 PIK3C2AO00443 1686 aa12.77□□□□□ -0.36
CTNNA1-224ENST00000520522 PARP4Q9UKK3 1724 aaKnown RBP12.77□□□□□ -0.36
CTNNA1-224ENST00000520522 USP35Q9P2H5 1018 aa12.77□□□□□ -0.37
CTNNA1-224ENST00000520522 AATKQ6ZMQ8 1374 aa12.77□□□□□ -0.37
CTNNA1-224ENST00000520522 CRB1P82279 1406 aa12.77□□□□□ -0.37
CTNNA1-224ENST00000520522 PSDA5PKW4 1024 aaPredicted RBP12.76□□□□□ -0.37
CTNNA1-224ENST00000520522 NLRP6P59044 892 aa12.76□□□□□ -0.37
CTNNA1-224ENST00000520522 PDE3BQ13370 1112 aa12.76□□□□□ -0.37
CTNNA1-224ENST00000520522 CAMKK2Q96RR4 588 aa12.76□□□□□ -0.37
CTNNA1-224ENST00000520522 C11orf95C9JLR9 678 aaPredicted RBP12.75□□□□□ -0.37
CTNNA1-224ENST00000520522 TRIM37O94972 964 aa12.75□□□□□ -0.37
CTNNA1-224ENST00000520522 EZH2Q15910 746 aaKnown RBP12.75□□□□□ -0.37
CTNNA1-224ENST00000520522 SIN3AQ96ST3 1273 aa12.75□□□□□ -0.37
CTNNA1-224ENST00000520522 SBNO2Q9Y2G9 1366 aa12.75□□□□□ -0.37
CTNNA1-224ENST00000520522 COL18A1P39060 1754 aa12.74□□□□□ -0.37
CTNNA1-224ENST00000520522 AKAP12Q02952 1782 aa12.74□□□□□ -0.37
CTNNA1-224ENST00000520522 RREB1Q92766 1687 aa12.74□□□□□ -0.37
CTNNA1-224ENST00000520522 CPSF1Q10570 1443 aaKnown RBP12.74□□□□□ -0.37
CTNNA1-224ENST00000520522 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
CTNNA1-224ENST00000520522 TTC21AQ8NDW8 1320 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms