RNA–Protein interactions for RNA: ENST00000520480.5

R3HCC1-206, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 3

Gene R3HCC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-206ENST00000520480 ATRNO75882 1429 aa20.45■□□□□ 0.86
R3HCC1-206ENST00000520480 PPIP5K1Q6PFW1 1433 aa20.45■□□□□ 0.86
R3HCC1-206ENST00000520480 CARD11Q9BXL7 1154 aa20.45■□□□□ 0.86
R3HCC1-206ENST00000520480 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.44■□□□□ 0.86
R3HCC1-206ENST00000520480 SLIT2O94813 1529 aa20.43■□□□□ 0.86
R3HCC1-206ENST00000520480 UNC5CLQ8IV45 518 aa20.42■□□□□ 0.86
R3HCC1-206ENST00000520480 RGS12O14924 1447 aa20.42■□□□□ 0.86
R3HCC1-206ENST00000520480 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
R3HCC1-206ENST00000520480 NWD2Q9ULI1 1742 aa20.41■□□□□ 0.86
R3HCC1-206ENST00000520480 PLCH1Q4KWH8 1693 aa20.4■□□□□ 0.86
R3HCC1-206ENST00000520480 SBNO2Q9Y2G9 1366 aa20.4■□□□□ 0.86
R3HCC1-206ENST00000520480 CRYBG1Q9Y4K1 1723 aa20.4■□□□□ 0.86
R3HCC1-206ENST00000520480 BRD4O60885 1362 aaPredicted RBP20.38■□□□□ 0.85
R3HCC1-206ENST00000520480 CLSPNQ9HAW4 1339 aa20.38■□□□□ 0.85
R3HCC1-206ENST00000520480 GJD4Q96KN9 370 aaPredicted RBP20.38■□□□□ 0.85
R3HCC1-206ENST00000520480 CABP1Q9NZU7 370 aa20.38■□□□□ 0.85
R3HCC1-206ENST00000520480 FAM83GA6ND36 823 aa20.37■□□□□ 0.85
R3HCC1-206ENST00000520480 COL14A1Q05707 1796 aaKnown RBP20.36■□□□□ 0.85
R3HCC1-206ENST00000520480 ABTB2Q8N961 1025 aa20.36■□□□□ 0.85
R3HCC1-206ENST00000520480 ATAD2Q6PL18 1390 aa20.35■□□□□ 0.85
R3HCC1-206ENST00000520480 PHRF1Q9P1Y6 1649 aaKnown RBP20.35■□□□□ 0.85
R3HCC1-206ENST00000520480 TIMELESSQ9UNS1 1208 aa20.34■□□□□ 0.85
R3HCC1-206ENST00000520480 USP6P35125 1406 aa20.34■□□□□ 0.85
R3HCC1-206ENST00000520480 VPS72Q15906 364 aa20.33■□□□□ 0.85
R3HCC1-206ENST00000520480 NUTM2GQ5VZR2 741 aa20.33■□□□□ 0.85
R3HCC1-206ENST00000520480 EP400Q96L91 3159 aa20.32■□□□□ 0.84
R3HCC1-206ENST00000520480 PRDM11Q9NQV5 511 aa20.32■□□□□ 0.84
R3HCC1-206ENST00000520480 BTG4Q9NY30 223 aa20.32■□□□□ 0.84
R3HCC1-206ENST00000520480 GLI3P10071 1580 aa20.32■□□□□ 0.84
R3HCC1-206ENST00000520480 NRAPQ86VF7 1730 aa20.31■□□□□ 0.84
R3HCC1-206ENST00000520480 NLRP13Q86W25 1043 aa20.31■□□□□ 0.84
R3HCC1-206ENST00000520480 UPF1Q92900 1129 aaKnown RBP eCLIP20.31■□□□□ 0.845e-8■■■■■ 31.3
R3HCC1-206ENST00000520480 ZNF692Q9BU19 519 aaPredicted RBP20.31■□□□□ 0.84
R3HCC1-206ENST00000520480 CCDC9Q9Y3X0 531 aaKnown RBP20.3■□□□□ 0.84
R3HCC1-206ENST00000520480 AKAP12Q02952 1782 aa20.3■□□□□ 0.84
R3HCC1-206ENST00000520480 KIAA0232Q92628 1395 aa20.3■□□□□ 0.84
R3HCC1-206ENST00000520480 USP19O94966 1318 aa20.29■□□□□ 0.84
R3HCC1-206ENST00000520480 SLC24A1O60721 1099 aa20.29■□□□□ 0.84
R3HCC1-206ENST00000520480 SSH2Q76I76 1423 aa20.28■□□□□ 0.84
R3HCC1-206ENST00000520480 NRKQ7Z2Y5 1582 aa20.28■□□□□ 0.84
R3HCC1-206ENST00000520480 ZC3H6P61129 1189 aaKnown RBP20.27■□□□□ 0.84
R3HCC1-206ENST00000520480 ST20-MTHFSA0A0A6YYL1 179 aa20.26■□□□□ 0.83
R3HCC1-206ENST00000520480 PUS7Q96PZ0 661 aaKnown RBP20.26■□□□□ 0.83
R3HCC1-206ENST00000520480 CPSF1Q10570 1443 aaKnown RBP20.26■□□□□ 0.83
R3HCC1-206ENST00000520480 CPDO75976 1380 aa20.25■□□□□ 0.83
R3HCC1-206ENST00000520480 NLRP6P59044 892 aa20.25■□□□□ 0.83
R3HCC1-206ENST00000520480 PIK3C2AO00443 1686 aa20.25■□□□□ 0.83
R3HCC1-206ENST00000520480 KTN1Q86UP2 1357 aaKnown RBP20.24■□□□□ 0.83
R3HCC1-206ENST00000520480 GCP02774 474 aa20.24■□□□□ 0.83
R3HCC1-206ENST00000520480 CHRNA2Q15822 529 aa20.24■□□□□ 0.83
R3HCC1-206ENST00000520480 CCER1Q8TC90 406 aaPredicted RBP20.24■□□□□ 0.83
R3HCC1-206ENST00000520480 TESK2Q96S53 571 aa20.24■□□□□ 0.83
R3HCC1-206ENST00000520480 TTC21BQ7Z4L5 1316 aa20.24■□□□□ 0.83
R3HCC1-206ENST00000520480 TTC21AQ8NDW8 1320 aa20.24■□□□□ 0.83
R3HCC1-206ENST00000520480 ONECUT3O60422 494 aaPredicted RBP20.23■□□□□ 0.83
R3HCC1-206ENST00000520480 MON2Q7Z3U7 1717 aa20.23■□□□□ 0.83
R3HCC1-206ENST00000520480 TMC1Q8TDI8 760 aa20.23■□□□□ 0.83
R3HCC1-206ENST00000520480 USP47Q96K76 1375 aa20.22■□□□□ 0.83
R3HCC1-206ENST00000520480 SEPT12Q8IYM1 358 aa20.22■□□□□ 0.83
R3HCC1-206ENST00000520480 SLIT3O75094 1523 aa20.22■□□□□ 0.83
R3HCC1-206ENST00000520480 SPATA31A5Q5VU36 1347 aa20.21■□□□□ 0.83
R3HCC1-206ENST00000520480 SPATA31A7Q8IWB4 1347 aa20.21■□□□□ 0.83
R3HCC1-206ENST00000520480 BRWD3Q6RI45 1802 aa20.2■□□□□ 0.82
R3HCC1-206ENST00000520480 HDGFL2Q7Z4V5 671 aaPredicted RBP20.2■□□□□ 0.82
R3HCC1-206ENST00000520480 CD163L1Q9NR16 1453 aa20.19■□□□□ 0.82
R3HCC1-206ENST00000520480 EVA1CP58658 441 aa20.19■□□□□ 0.82
R3HCC1-206ENST00000520480 SLC12A5Q9H2X9 1139 aa20.19■□□□□ 0.82
R3HCC1-206ENST00000520480 STRN4Q9NRL3 753 aa20.19■□□□□ 0.82
R3HCC1-206ENST00000520480 TERF2IPQ9NYB0 399 aa20.19■□□□□ 0.82
R3HCC1-206ENST00000520480 LMO7Q8WWI1 1683 aa20.19■□□□□ 0.82
R3HCC1-206ENST00000520480 NINLQ9Y2I6 1382 aa20.19■□□□□ 0.82
R3HCC1-206ENST00000520480 A0A0G2JS52 829 aa20.18■□□□□ 0.82
R3HCC1-206ENST00000520480 MYT1Q01538 1121 aa20.18■□□□□ 0.82
R3HCC1-206ENST00000520480 FAM98CQ17RN3 349 aaKnown RBP20.18■□□□□ 0.82
R3HCC1-206ENST00000520480 CAMTA1Q9Y6Y1 1673 aa20.17■□□□□ 0.82
R3HCC1-206ENST00000520480 KCNH5Q8NCM2 988 aa20.17■□□□□ 0.82
R3HCC1-206ENST00000520480 SPATA31A1Q5TZJ5 1347 aa20.17■□□□□ 0.82
R3HCC1-206ENST00000520480 TMF1P82094 1093 aa20.16■□□□□ 0.82
R3HCC1-206ENST00000520480 KRT27Q7Z3Y8 459 aa20.15■□□□□ 0.82
R3HCC1-206ENST00000520480 CCDC125Q86Z20 511 aa20.15■□□□□ 0.82
R3HCC1-206ENST00000520480 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.15■□□□□ 0.82
R3HCC1-206ENST00000520480 AATKQ6ZMQ8 1374 aa20.15■□□□□ 0.82
R3HCC1-206ENST00000520480 EDC4Q6P2E9 1401 aaKnown RBP20.14■□□□□ 0.81
R3HCC1-206ENST00000520480 A0A1W2PP64 1363 aa20.14■□□□□ 0.81
R3HCC1-206ENST00000520480 ZBTB7CA1YPR0 619 aa20.14■□□□□ 0.81
R3HCC1-206ENST00000520480 USP31Q70CQ4 1352 aa20.13■□□□□ 0.81
R3HCC1-206ENST00000520480 CDCA8Q53HL2 280 aa20.13■□□□□ 0.81
R3HCC1-206ENST00000520480 USP54Q70EL1 1684 aa20.13■□□□□ 0.81
R3HCC1-206ENST00000520480 THSD7AQ9UPZ6 1657 aa20.13■□□□□ 0.81
R3HCC1-206ENST00000520480 COL5A2P05997 1499 aaPredicted RBP20.12■□□□□ 0.81
R3HCC1-206ENST00000520480 LARP1Q6PKG0 1096 aaKnown RBP20.11■□□□□ 0.81
R3HCC1-206ENST00000520480 SOX12O15370 315 aa20.1■□□□□ 0.81
R3HCC1-206ENST00000520480 ARHGEF25Q86VW2 580 aa20.1■□□□□ 0.81
R3HCC1-206ENST00000520480 NME9Q86XW9 330 aa20.1■□□□□ 0.81
R3HCC1-206ENST00000520480 USP35Q9P2H5 1018 aa20.1■□□□□ 0.81
R3HCC1-206ENST00000520480 NFAT5O94916 1531 aa20.1■□□□□ 0.81
R3HCC1-206ENST00000520480 COL18A1P39060 1754 aa20.1■□□□□ 0.81
R3HCC1-206ENST00000520480 BARGINQ6ZT62 677 aa20.09■□□□□ 0.81
R3HCC1-206ENST00000520480 BLMP54132 1417 aaPredicted RBP20.09■□□□□ 0.81
R3HCC1-206ENST00000520480 TCP11L2Q8N4U5 519 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms