RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 AATKQ6ZMQ8 1374 aa21.52■■□□□ 1.04
SNHG6-201ENST00000520348 TTC21BQ7Z4L5 1316 aa21.52■■□□□ 1.03
SNHG6-201ENST00000520348 PNPLA6Q8IY17 1366 aa21.51■■□□□ 1.03
SNHG6-201ENST00000520348 TTC21AQ8NDW8 1320 aa21.51■■□□□ 1.03
SNHG6-201ENST00000520348 USP31Q70CQ4 1352 aa21.48■■□□□ 1.03
SNHG6-201ENST00000520348 MTHFSP49914 203 aa21.48■■□□□ 1.03
SNHG6-201ENST00000520348 NUTM2FA1L443 756 aa21.47■■□□□ 1.03
SNHG6-201ENST00000520348 NME9Q86XW9 330 aa21.47■■□□□ 1.03
SNHG6-201ENST00000520348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.47■■□□□ 1.03
SNHG6-201ENST00000520348 TMEM94Q12767 1356 aa21.47■■□□□ 1.03
SNHG6-201ENST00000520348 PIK3C2AO00443 1686 aa21.47■■□□□ 1.03
SNHG6-201ENST00000520348 KIF1AQ12756 1690 aa21.47■■□□□ 1.03
SNHG6-201ENST00000520348 WDR43Q15061 677 aaKnown RBP eCLIP21.46■■□□□ 1.03
SNHG6-201ENST00000520348 PROSER2Q86WR7 435 aaPredicted RBP21.46■■□□□ 1.03
SNHG6-201ENST00000520348 ADAMTS8Q9UP79 889 aa21.46■■□□□ 1.03
SNHG6-201ENST00000520348 XIRP1Q702N8 1843 aaKnown RBP21.45■■□□□ 1.03
SNHG6-201ENST00000520348 CDK12Q9NYV4 1490 aaPredicted RBP21.45■■□□□ 1.03
SNHG6-201ENST00000520348 MARF1Q9Y4F3 1742 aaKnown RBP21.44■■□□□ 1.02
SNHG6-201ENST00000520348 CFAP53Q96M91 514 aa21.44■■□□□ 1.02
SNHG6-201ENST00000520348 C19orf44Q9H6X5 657 aa21.44■■□□□ 1.02
SNHG6-201ENST00000520348 TNNT2P45379 298 aaPredicted RBP21.43■■□□□ 1.02
SNHG6-201ENST00000520348 C1orf167Q5SNV9 1468 aa21.43■■□□□ 1.02
SNHG6-201ENST00000520348 MST1RQ04912 1400 aa21.42■■□□□ 1.02
SNHG6-201ENST00000520348 PMFBP1Q8TBY8 1022 aa21.42■■□□□ 1.02
SNHG6-201ENST00000520348 RBM33Q96EV2 1170 aaKnown RBP21.42■■□□□ 1.02
SNHG6-201ENST00000520348 COG3Q96JB2 828 aa21.42■■□□□ 1.02
SNHG6-201ENST00000520348 PHF8Q9UPP1 1060 aa21.42■■□□□ 1.02
SNHG6-201ENST00000520348 NGDNQ8NEJ9 315 aaKnown RBP21.41■■□□□ 1.02
SNHG6-201ENST00000520348 POLKQ9UBT6 870 aa21.4■■□□□ 1.02
SNHG6-201ENST00000520348 ZRANB1Q9UGI0 708 aa21.4■■□□□ 1.02
SNHG6-201ENST00000520348 MAP2P11137 1827 aaKnown RBP21.4■■□□□ 1.02
SNHG6-201ENST00000520348 IQSEC2Q5JU85 1478 aa21.39■■□□□ 1.02
SNHG6-201ENST00000520348 TRPM3Q9HCF6 1732 aaPredicted RBP21.38■■□□□ 1.01
SNHG6-201ENST00000520348 C14orf37Q86TY3 774 aa21.37■■□□□ 1.01
SNHG6-201ENST00000520348 NGEFQ8N5V2 710 aa21.36■■□□□ 1.01
SNHG6-201ENST00000520348 ZNF521Q96K83 1311 aa21.34■■□□□ 1.01
SNHG6-201ENST00000520348 PDE3BQ13370 1112 aa21.34■■□□□ 1.01
SNHG6-201ENST00000520348 NCBP3Q53F19 620 aaKnown RBP21.34■■□□□ 1.01
SNHG6-201ENST00000520348 DMRT2Q9Y5R5 561 aa21.34■■□□□ 1.01
SNHG6-201ENST00000520348 PEAK1Q9H792 1746 aa21.34■■□□□ 1.01
SNHG6-201ENST00000520348 MSH6P52701 1360 aa21.33■■□□□ 1
SNHG6-201ENST00000520348 ESCO1Q5FWF5 840 aa21.32■■□□□ 1
SNHG6-201ENST00000520348 CADPS2Q86UW7 1296 aa21.32■■□□□ 1
SNHG6-201ENST00000520348 ZNF335Q9H4Z2 1342 aaPredicted RBP21.31■■□□□ 1
SNHG6-201ENST00000520348 ORAI2Q96SN7 254 aa21.31■■□□□ 1
SNHG6-201ENST00000520348 EMILIN1Q9Y6C2 1016 aa21.31■■□□□ 1
SNHG6-201ENST00000520348 KIF24Q5T7B8 1368 aa21.31■■□□□ 1
SNHG6-201ENST00000520348 DIAPH1O60610 1272 aaKnown RBP21.3■■□□□ 1
SNHG6-201ENST00000520348 NUDCQ9Y266 331 aa21.3■■□□□ 1
SNHG6-201ENST00000520348 SLIT3O75094 1523 aa21.29■■□□□ 1
SNHG6-201ENST00000520348 ALS2Q96Q42 1657 aa21.29■■□□□ 1
SNHG6-201ENST00000520348 ATF3P18847 181 aa21.29■■□□□ 1
SNHG6-201ENST00000520348 RUNDC1Q96C34 613 aa21.29■■□□□ 1
SNHG6-201ENST00000520348 PHRF1Q9P1Y6 1649 aaKnown RBP21.29■■□□□ 1
SNHG6-201ENST00000520348 NFAT5O94916 1531 aa21.29■■□□□ 1
SNHG6-201ENST00000520348 FBLN1P23142 703 aa21.28■■□□□ 1
SNHG6-201ENST00000520348 RGPD1P0DJD0 1748 aa21.28■■□□□ 1
SNHG6-201ENST00000520348 PHF23Q9BUL5 403 aaPredicted RBP21.27■■□□□ 1
SNHG6-201ENST00000520348 GTF3C3Q9Y5Q9 886 aa21.27■■□□□ 1
SNHG6-201ENST00000520348 SBNO1A3KN83 1393 aa21.26■□□□□ 0.99
SNHG6-201ENST00000520348 IL13P35225 146 aa21.26■□□□□ 0.99
SNHG6-201ENST00000520348 RRS1Q15050 365 aaKnown RBP21.25■□□□□ 0.99
SNHG6-201ENST00000520348 CCDC146Q8IYE0 955 aa21.25■□□□□ 0.99
SNHG6-201ENST00000520348 PLEKHF1Q96S99 279 aa21.25■□□□□ 0.99
SNHG6-201ENST00000520348 APAF1O14727 1248 aa21.24■□□□□ 0.99
SNHG6-201ENST00000520348 U2AF1L5P0DN76 240 aaPredicted RBP21.24■□□□□ 0.99
SNHG6-201ENST00000520348 U2AF1Q01081 240 aaKnown RBP eCLIP21.24■□□□□ 0.99
SNHG6-201ENST00000520348 MAP3K19Q56UN5 1328 aa21.24■□□□□ 0.99
SNHG6-201ENST00000520348 RTL1A6NKG5 1358 aa21.23■□□□□ 0.99
SNHG6-201ENST00000520348 FLT4P35916 1363 aa21.23■□□□□ 0.99
SNHG6-201ENST00000520348 NLRP6P59044 892 aa21.23■□□□□ 0.99
SNHG6-201ENST00000520348 PSME1Q06323 249 aa21.23■□□□□ 0.99
SNHG6-201ENST00000520348 PXDNQ92626 1479 aa21.23■□□□□ 0.99
SNHG6-201ENST00000520348 USP19O94966 1318 aa21.23■□□□□ 0.99
SNHG6-201ENST00000520348 CCDC27Q2M243 656 aa21.22■□□□□ 0.99
SNHG6-201ENST00000520348 ABTB2Q8N961 1025 aa21.22■□□□□ 0.99
SNHG6-201ENST00000520348 LTBP4Q8N2S1 1624 aa21.22■□□□□ 0.99
SNHG6-201ENST00000520348 FOXO3O43524 673 aa21.21■□□□□ 0.99
SNHG6-201ENST00000520348 FCHSD2O94868 740 aa21.21■□□□□ 0.99
SNHG6-201ENST00000520348 MED1Q15648 1581 aaPredicted RBP21.2■□□□□ 0.98
SNHG6-201ENST00000520348 RSPH6AQ9H0K4 717 aa21.2■□□□□ 0.98
SNHG6-201ENST00000520348 SENP3-EIF4A1A0A087X0R7 540 aa21.19■□□□□ 0.98
SNHG6-201ENST00000520348 U2SURPO15042 1029 aaKnown RBP21.19■□□□□ 0.98
SNHG6-201ENST00000520348 KRT28Q7Z3Y7 464 aa21.19■□□□□ 0.98
SNHG6-201ENST00000520348 TCP11L2Q8N4U5 519 aa21.19■□□□□ 0.98
SNHG6-201ENST00000520348 PNNQ9H307 717 aaKnown RBP21.19■□□□□ 0.98
SNHG6-201ENST00000520348 TRMT2AQ8IZ69 625 aaKnown RBP21.18■□□□□ 0.98
SNHG6-201ENST00000520348 RNF123Q5XPI4 1314 aa21.18■□□□□ 0.98
SNHG6-201ENST00000520348 NPHP3Q7Z494 1330 aa21.18■□□□□ 0.98
SNHG6-201ENST00000520348 CRYBG1Q9Y4K1 1723 aa21.18■□□□□ 0.98
SNHG6-201ENST00000520348 LTN1O94822 1766 aa21.18■□□□□ 0.98
SNHG6-201ENST00000520348 PPM1GO15355 546 aaPredicted RBP21.17■□□□□ 0.98
SNHG6-201ENST00000520348 EIF4A2Q14240 407 aaKnown RBP21.17■□□□□ 0.98
SNHG6-201ENST00000520348 TNS3Q68CZ2 1445 aa21.16■□□□□ 0.98
SNHG6-201ENST00000520348 ARHGEF10O15013 1369 aa21.16■□□□□ 0.98
SNHG6-201ENST00000520348 PAK3O75914 559 aaPredicted RBP21.16■□□□□ 0.98
SNHG6-201ENST00000520348 KCNH5Q8NCM2 988 aa21.16■□□□□ 0.98
SNHG6-201ENST00000520348 CDCA7LQ96GN5 454 aa21.16■□□□□ 0.98
SNHG6-201ENST00000520348 SALL2Q9Y467 1007 aaPredicted RBP21.16■□□□□ 0.98
SNHG6-201ENST00000520348 NHSL1Q5SYE7 1610 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms