RNA–Protein interactions for RNA: ENST00000519952.5

R3HCC1-205, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-205ENST00000519952 FOXO3O43524 673 aa17.01■□□□□ 0.31
R3HCC1-205ENST00000519952 PIK3C2GO75747 1445 aa17.01■□□□□ 0.31
R3HCC1-205ENST00000519952 WASHC2AQ641Q2 1341 aa16.99■□□□□ 0.31
R3HCC1-205ENST00000519952 GIGYF1O75420 1035 aaPredicted RBP16.99■□□□□ 0.31
R3HCC1-205ENST00000519952 HAP1P54257 671 aaPredicted RBP16.99■□□□□ 0.31
R3HCC1-205ENST00000519952 NBPF14Q5TI25 921 aa16.99■□□□□ 0.31
R3HCC1-205ENST00000519952 PLCH1Q4KWH8 1693 aa16.99■□□□□ 0.31
R3HCC1-205ENST00000519952 EIF3AQ14152 1382 aaKnown RBP16.99■□□□□ 0.31
R3HCC1-205ENST00000519952 CCDC7Q96M83 1385 aa16.99■□□□□ 0.31
R3HCC1-205ENST00000519952 SLC24A1O60721 1099 aa16.98■□□□□ 0.31
R3HCC1-205ENST00000519952 TMEM132EQ6IEE7 984 aa16.98■□□□□ 0.31
R3HCC1-205ENST00000519952 NWD2Q9ULI1 1742 aa16.98■□□□□ 0.31
R3HCC1-205ENST00000519952 ADGRB2O60241 1585 aa16.98■□□□□ 0.31
R3HCC1-205ENST00000519952 PLEKHG5O94827 1062 aa16.97■□□□□ 0.31
R3HCC1-205ENST00000519952 C11orf95C9JLR9 678 aaPredicted RBP16.96■□□□□ 0.31
R3HCC1-205ENST00000519952 TRIM37O94972 964 aa16.96■□□□□ 0.31
R3HCC1-205ENST00000519952 APBA3O96018 575 aa16.96■□□□□ 0.31
R3HCC1-205ENST00000519952 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.3
R3HCC1-205ENST00000519952 POLR3GLQ9BT43 218 aa16.95■□□□□ 0.3
R3HCC1-205ENST00000519952 PARD3Q8TEW0 1356 aa16.94■□□□□ 0.3
R3HCC1-205ENST00000519952 NUP188Q5SRE5 1749 aa16.94■□□□□ 0.3
R3HCC1-205ENST00000519952 TMF1P82094 1093 aa16.94■□□□□ 0.3
R3HCC1-205ENST00000519952 MIER1Q8N108 512 aa16.94■□□□□ 0.3
R3HCC1-205ENST00000519952 STK26Q9P289 416 aa16.94■□□□□ 0.3
R3HCC1-205ENST00000519952 LRPPRCP42704 1394 aaKnown RBP16.93■□□□□ 0.3
R3HCC1-205ENST00000519952 RREB1Q92766 1687 aa16.93■□□□□ 0.3
R3HCC1-205ENST00000519952 CABLES1Q8TDN4 633 aa16.92■□□□□ 0.3
R3HCC1-205ENST00000519952 SIRT1Q96EB6 747 aa16.92■□□□□ 0.3
R3HCC1-205ENST00000519952 SPATA31A3Q5VYP0 1347 aa16.92■□□□□ 0.3
R3HCC1-205ENST00000519952 CDCA8Q53HL2 280 aa16.91■□□□□ 0.3
R3HCC1-205ENST00000519952 ABCC11Q96J66 1382 aa16.9■□□□□ 0.3
R3HCC1-205ENST00000519952 ROBO2Q9HCK4 1378 aa16.9■□□□□ 0.3
R3HCC1-205ENST00000519952 ANP32CO43423 234 aa16.9■□□□□ 0.3
R3HCC1-205ENST00000519952 TRAK1Q9UPV9 953 aa16.89■□□□□ 0.29
R3HCC1-205ENST00000519952 NRKQ7Z2Y5 1582 aa16.89■□□□□ 0.29
R3HCC1-205ENST00000519952 TESK2Q96S53 571 aa16.88■□□□□ 0.29
R3HCC1-205ENST00000519952 YTHDC2Q9H6S0 1430 aaKnown RBP16.87■□□□□ 0.29
R3HCC1-205ENST00000519952 NUTM2FA1L443 756 aa16.87■□□□□ 0.29
R3HCC1-205ENST00000519952 FAM83GA6ND36 823 aa16.87■□□□□ 0.29
R3HCC1-205ENST00000519952 FAM196AQ6ZSG2 479 aa16.87■□□□□ 0.29
R3HCC1-205ENST00000519952 ADGRB1O14514 1584 aa16.86■□□□□ 0.29
R3HCC1-205ENST00000519952 CENPJQ9HC77 1338 aaPredicted RBP16.86■□□□□ 0.29
R3HCC1-205ENST00000519952 TECPR2O15040 1411 aa16.86■□□□□ 0.29
R3HCC1-205ENST00000519952 NRAPQ86VF7 1730 aa16.84■□□□□ 0.29
R3HCC1-205ENST00000519952 BTG4Q9NY30 223 aa16.84■□□□□ 0.29
R3HCC1-205ENST00000519952 MYOM1P52179 1685 aa16.84■□□□□ 0.29
R3HCC1-205ENST00000519952 KRT28Q7Z3Y7 464 aa16.83■□□□□ 0.28
R3HCC1-205ENST00000519952 SAFB2Q14151 953 aaKnown RBP eCLIP16.82■□□□□ 0.28
R3HCC1-205ENST00000519952 WAPLQ7Z5K2 1190 aa16.82■□□□□ 0.28
R3HCC1-205ENST00000519952 GOLGB1Q14789 3259 aaKnown RBP16.82■□□□□ 0.28
R3HCC1-205ENST00000519952 THSD7AQ9UPZ6 1657 aa16.81■□□□□ 0.28
R3HCC1-205ENST00000519952 CDC42BPGQ6DT37 1551 aa16.81■□□□□ 0.28
R3HCC1-205ENST00000519952 LMOD2Q6P5Q4 547 aa16.81■□□□□ 0.28
R3HCC1-205ENST00000519952 SYT17Q9BSW7 474 aa16.81■□□□□ 0.28
R3HCC1-205ENST00000519952 FHDC1Q9C0D6 1143 aaPredicted RBP16.81■□□□□ 0.28
R3HCC1-205ENST00000519952 POGKQ9P215 609 aa16.81■□□□□ 0.28
R3HCC1-205ENST00000519952 ABCA3Q99758 1704 aa16.81■□□□□ 0.28
R3HCC1-205ENST00000519952 DLC1Q96QB1 1528 aa16.8■□□□□ 0.28
R3HCC1-205ENST00000519952 SBNO2Q9Y2G9 1366 aa16.8■□□□□ 0.28
R3HCC1-205ENST00000519952 SPATA31A5Q5VU36 1347 aa16.8■□□□□ 0.28
R3HCC1-205ENST00000519952 SPATA31A7Q8IWB4 1347 aa16.8■□□□□ 0.28
R3HCC1-205ENST00000519952 ZBTB7AO95365 584 aa16.8■□□□□ 0.28
R3HCC1-205ENST00000519952 PRAM1Q96QH2 718 aa16.8■□□□□ 0.28
R3HCC1-205ENST00000519952 QRICH2Q9H0J4 1663 aa16.8■□□□□ 0.28
R3HCC1-205ENST00000519952 TNS3Q68CZ2 1445 aa16.79■□□□□ 0.28
R3HCC1-205ENST00000519952 ARHGEF28Q8N1W1 1705 aaKnown RBP16.79■□□□□ 0.28
R3HCC1-205ENST00000519952 CAPN15O75808 1086 aa16.78■□□□□ 0.28
R3HCC1-205ENST00000519952 PLEKHH1Q9ULM0 1364 aa16.77■□□□□ 0.28
R3HCC1-205ENST00000519952 CASZ1Q86V15 1759 aa16.77■□□□□ 0.28
R3HCC1-205ENST00000519952 KNDC1Q76NI1 1749 aa16.77■□□□□ 0.28
R3HCC1-205ENST00000519952 PTGER2P43116 358 aa16.77■□□□□ 0.28
R3HCC1-205ENST00000519952 PDGFDQ9GZP0 370 aaPredicted RBP16.77■□□□□ 0.28
R3HCC1-205ENST00000519952 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.28
R3HCC1-205ENST00000519952 EVC2Q86UK5 1308 aa16.75■□□□□ 0.27
R3HCC1-205ENST00000519952 CCER2I3L3R5 266 aa16.75■□□□□ 0.27
R3HCC1-205ENST00000519952 PSME1Q06323 249 aa16.75■□□□□ 0.27
R3HCC1-205ENST00000519952 KIF1AQ12756 1690 aa16.75■□□□□ 0.27
R3HCC1-205ENST00000519952 PUS7Q96PZ0 661 aaKnown RBP16.74■□□□□ 0.27
R3HCC1-205ENST00000519952 MINK1Q8N4C8 1332 aaPredicted RBP16.73■□□□□ 0.27
R3HCC1-205ENST00000519952 GPR162Q16538 588 aa16.73■□□□□ 0.27
R3HCC1-205ENST00000519952 COL14A1Q05707 1796 aaKnown RBP16.73■□□□□ 0.27
R3HCC1-205ENST00000519952 HSPA6P17066 643 aa16.72■□□□□ 0.27
R3HCC1-205ENST00000519952 PANK3Q9H999 370 aa16.72■□□□□ 0.27
R3HCC1-205ENST00000519952 ANO8Q9HCE9 1232 aaPredicted RBP16.72■□□□□ 0.27
R3HCC1-205ENST00000519952 SHANK3Q9BYB0 1731 aa16.71■□□□□ 0.27
R3HCC1-205ENST00000519952 PDE3BQ13370 1112 aa16.71■□□□□ 0.27
R3HCC1-205ENST00000519952 ARHGEF10O15013 1369 aa16.71■□□□□ 0.27
R3HCC1-205ENST00000519952 PRKRIP1Q9H875 184 aaPredicted RBP16.7■□□□□ 0.26
R3HCC1-205ENST00000519952 SPATA31A1Q5TZJ5 1347 aa16.69■□□□□ 0.26
R3HCC1-205ENST00000519952 SBNO1A3KN83 1393 aa16.68■□□□□ 0.26
R3HCC1-205ENST00000519952 WASLO00401 505 aaPredicted RBP16.68■□□□□ 0.26
R3HCC1-205ENST00000519952 SRPK2P78362 688 aaKnown RBP16.67■□□□□ 0.26
R3HCC1-205ENST00000519952 TMC1Q8TDI8 760 aa16.67■□□□□ 0.26
R3HCC1-205ENST00000519952 KNSTRNQ9Y448 316 aa16.67■□□□□ 0.26
R3HCC1-205ENST00000519952 KTN1Q86UP2 1357 aaKnown RBP16.66■□□□□ 0.26
R3HCC1-205ENST00000519952 RALBP1Q15311 655 aa16.66■□□□□ 0.26
R3HCC1-205ENST00000519952 BCL11BQ9C0K0 894 aaPredicted RBP16.66■□□□□ 0.26
R3HCC1-205ENST00000519952 FMN2Q9NZ56 1722 aa16.66■□□□□ 0.26
R3HCC1-205ENST00000519952 USP35Q9P2H5 1018 aa16.66■□□□□ 0.26
R3HCC1-205ENST00000519952 PHF8Q9UPP1 1060 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms