RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 PLEKHG5O94827 1062 aa21.4■■□□□ 1.02
FBXO28-204ENST00000519894 ALS2Q96Q42 1657 aa21.39■■□□□ 1.01
FBXO28-204ENST00000519894 QRICH2Q9H0J4 1663 aa21.39■■□□□ 1.01
FBXO28-204ENST00000519894 ATRNO75882 1429 aa21.38■■□□□ 1.01
FBXO28-204ENST00000519894 TOPAZ1Q8N9V7 1692 aa21.38■■□□□ 1.01
FBXO28-204ENST00000519894 PLEKHG3A1L390 1219 aa21.38■■□□□ 1.01
FBXO28-204ENST00000519894 HAP1P54257 671 aaPredicted RBP21.38■■□□□ 1.01
FBXO28-204ENST00000519894 TONSLQ96HA7 1378 aa21.37■■□□□ 1.01
FBXO28-204ENST00000519894 SRPK2P78362 688 aaKnown RBP21.37■■□□□ 1.01
FBXO28-204ENST00000519894 CABP2Q9NPB3 220 aa21.37■■□□□ 1.01
FBXO28-204ENST00000519894 SLIT2O94813 1529 aa21.37■■□□□ 1.01
FBXO28-204ENST00000519894 ABCA3Q99758 1704 aa21.37■■□□□ 1.01
FBXO28-204ENST00000519894 RGS12O14924 1447 aa21.37■■□□□ 1.01
FBXO28-204ENST00000519894 POLR3AO14802 1390 aaPredicted RBP21.36■■□□□ 1.01
FBXO28-204ENST00000519894 ACEP12821 1306 aa21.36■■□□□ 1.01
FBXO28-204ENST00000519894 PAK3O75914 559 aaPredicted RBP21.35■■□□□ 1.01
FBXO28-204ENST00000519894 UNC5CLQ8IV45 518 aa21.34■■□□□ 1.01
FBXO28-204ENST00000519894 PPIP5K1Q6PFW1 1433 aa21.32■■□□□ 1
FBXO28-204ENST00000519894 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.32■■□□□ 1
FBXO28-204ENST00000519894 FAM83GA6ND36 823 aa21.31■■□□□ 1
FBXO28-204ENST00000519894 GJD4Q96KN9 370 aaPredicted RBP21.31■■□□□ 1
FBXO28-204ENST00000519894 EVC2Q86UK5 1308 aa21.3■■□□□ 1
FBXO28-204ENST00000519894 UPF1Q92900 1129 aaKnown RBP eCLIP21.3■■□□□ 1
FBXO28-204ENST00000519894 CRYBG1Q9Y4K1 1723 aa21.29■■□□□ 1
FBXO28-204ENST00000519894 CARD11Q9BXL7 1154 aa21.29■■□□□ 1
FBXO28-204ENST00000519894 RALGAPBQ86X10 1494 aa21.28■■□□□ 1
FBXO28-204ENST00000519894 CABP1Q9NZU7 370 aa21.28■■□□□ 1
FBXO28-204ENST00000519894 PLCH1Q4KWH8 1693 aa21.28■■□□□ 1
FBXO28-204ENST00000519894 NWD2Q9ULI1 1742 aa21.26■□□□□ 0.99
FBXO28-204ENST00000519894 NUTM2GQ5VZR2 741 aa21.26■□□□□ 0.99
FBXO28-204ENST00000519894 GLI3P10071 1580 aa21.25■□□□□ 0.99
FBXO28-204ENST00000519894 VPS72Q15906 364 aa21.25■□□□□ 0.99
FBXO28-204ENST00000519894 ABTB2Q8N961 1025 aa21.23■□□□□ 0.99
FBXO28-204ENST00000519894 COL14A1Q05707 1796 aaKnown RBP21.23■□□□□ 0.99
FBXO28-204ENST00000519894 SBNO2Q9Y2G9 1366 aa21.23■□□□□ 0.99
FBXO28-204ENST00000519894 BTG4Q9NY30 223 aa21.22■□□□□ 0.99
FBXO28-204ENST00000519894 PHRF1Q9P1Y6 1649 aaKnown RBP21.22■□□□□ 0.99
FBXO28-204ENST00000519894 NPM3O75607 178 aaKnown RBP21.21■□□□□ 0.99
FBXO28-204ENST00000519894 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
FBXO28-204ENST00000519894 BRD4O60885 1362 aaPredicted RBP21.21■□□□□ 0.99
FBXO28-204ENST00000519894 NRAPQ86VF7 1730 aa21.21■□□□□ 0.99
FBXO28-204ENST00000519894 USP6P35125 1406 aa21.21■□□□□ 0.99
FBXO28-204ENST00000519894 PRDM11Q9NQV5 511 aa21.2■□□□□ 0.98
FBXO28-204ENST00000519894 ZC3H6P61129 1189 aaKnown RBP21.19■□□□□ 0.98
FBXO28-204ENST00000519894 CCDC9Q9Y3X0 531 aaKnown RBP21.19■□□□□ 0.98
FBXO28-204ENST00000519894 KIAA0232Q92628 1395 aa21.19■□□□□ 0.98
FBXO28-204ENST00000519894 SSH2Q76I76 1423 aa21.19■□□□□ 0.98
FBXO28-204ENST00000519894 NLRP13Q86W25 1043 aa21.18■□□□□ 0.98
FBXO28-204ENST00000519894 USP19O94966 1318 aa21.18■□□□□ 0.98
FBXO28-204ENST00000519894 ATAD2Q6PL18 1390 aa21.18■□□□□ 0.98
FBXO28-204ENST00000519894 CHRNA2Q15822 529 aa21.17■□□□□ 0.98
FBXO28-204ENST00000519894 ONECUT3O60422 494 aaPredicted RBP21.16■□□□□ 0.98
FBXO28-204ENST00000519894 ZNF692Q9BU19 519 aaPredicted RBP21.16■□□□□ 0.98
FBXO28-204ENST00000519894 NRKQ7Z2Y5 1582 aa21.15■□□□□ 0.98
FBXO28-204ENST00000519894 SEPT12Q8IYM1 358 aa21.15■□□□□ 0.98
FBXO28-204ENST00000519894 U3KPZ7 1027 aaPredicted RBP21.15■□□□□ 0.98
FBXO28-204ENST00000519894 CPSF1Q10570 1443 aaKnown RBP21.14■□□□□ 0.98
FBXO28-204ENST00000519894 GCP02774 474 aa21.14■□□□□ 0.97
FBXO28-204ENST00000519894 DSG3P32926 999 aa21.14■□□□□ 0.97
FBXO28-204ENST00000519894 AKAP12Q02952 1782 aa21.14■□□□□ 0.97
FBXO28-204ENST00000519894 TTC21BQ7Z4L5 1316 aa21.13■□□□□ 0.97
FBXO28-204ENST00000519894 CLSPNQ9HAW4 1339 aa21.13■□□□□ 0.97
FBXO28-204ENST00000519894 ST20-MTHFSA0A0A6YYL1 179 aa21.13■□□□□ 0.97
FBXO28-204ENST00000519894 NLRP6P59044 892 aa21.13■□□□□ 0.97
FBXO28-204ENST00000519894 TESK2Q96S53 571 aa21.12■□□□□ 0.97
FBXO28-204ENST00000519894 BRWD3Q6RI45 1802 aa21.12■□□□□ 0.97
FBXO28-204ENST00000519894 CPDO75976 1380 aa21.11■□□□□ 0.97
FBXO28-204ENST00000519894 SPATA31A5Q5VU36 1347 aa21.11■□□□□ 0.97
FBXO28-204ENST00000519894 SPATA31A7Q8IWB4 1347 aa21.11■□□□□ 0.97
FBXO28-204ENST00000519894 TIMELESSQ9UNS1 1208 aa21.11■□□□□ 0.97
FBXO28-204ENST00000519894 PIK3C2AO00443 1686 aa21.11■□□□□ 0.97
FBXO28-204ENST00000519894 FAM98CQ17RN3 349 aaKnown RBP21.1■□□□□ 0.97
FBXO28-204ENST00000519894 PUS7Q96PZ0 661 aaKnown RBP21.09■□□□□ 0.97
FBXO28-204ENST00000519894 SPINK5Q9NQ38 1064 aaPredicted RBP21.09■□□□□ 0.97
FBXO28-204ENST00000519894 STRN4Q9NRL3 753 aa21.09■□□□□ 0.97
FBXO28-204ENST00000519894 KTN1Q86UP2 1357 aaKnown RBP21.09■□□□□ 0.97
FBXO28-204ENST00000519894 SLIT3O75094 1523 aa21.09■□□□□ 0.97
FBXO28-204ENST00000519894 TTC21AQ8NDW8 1320 aa21.08■□□□□ 0.97
FBXO28-204ENST00000519894 CD163L1Q9NR16 1453 aa21.08■□□□□ 0.97
FBXO28-204ENST00000519894 CAPN15O75808 1086 aa21.08■□□□□ 0.97
FBXO28-204ENST00000519894 TMC1Q8TDI8 760 aa21.08■□□□□ 0.97
FBXO28-204ENST00000519894 SLC12A5Q9H2X9 1139 aa21.08■□□□□ 0.97
FBXO28-204ENST00000519894 CAMTA1Q9Y6Y1 1673 aa21.08■□□□□ 0.96
FBXO28-204ENST00000519894 LMO7Q8WWI1 1683 aa21.07■□□□□ 0.96
FBXO28-204ENST00000519894 MON2Q7Z3U7 1717 aa21.07■□□□□ 0.96
FBXO28-204ENST00000519894 SPATA31A1Q5TZJ5 1347 aa21.06■□□□□ 0.96
FBXO28-204ENST00000519894 EVA1CP58658 441 aa21.06■□□□□ 0.96
FBXO28-204ENST00000519894 KRT27Q7Z3Y8 459 aa21.06■□□□□ 0.96
FBXO28-204ENST00000519894 A0A0G2JS52 829 aa21.04■□□□□ 0.96
FBXO28-204ENST00000519894 MYT1Q01538 1121 aa21.04■□□□□ 0.96
FBXO28-204ENST00000519894 USP47Q96K76 1375 aa21.04■□□□□ 0.96
FBXO28-204ENST00000519894 ZBTB7CA1YPR0 619 aa21.03■□□□□ 0.96
FBXO28-204ENST00000519894 SLC24A1O60721 1099 aa21.03■□□□□ 0.96
FBXO28-204ENST00000519894 LARP1Q6PKG0 1096 aaKnown RBP21.03■□□□□ 0.96
FBXO28-204ENST00000519894 HDGFL2Q7Z4V5 671 aaPredicted RBP21.03■□□□□ 0.96
FBXO28-204ENST00000519894 CCDC125Q86Z20 511 aa21.03■□□□□ 0.96
FBXO28-204ENST00000519894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.02■□□□□ 0.96
FBXO28-204ENST00000519894 ZRANB1Q9UGI0 708 aa21.02■□□□□ 0.96
FBXO28-204ENST00000519894 AATKQ6ZMQ8 1374 aa21.01■□□□□ 0.95
FBXO28-204ENST00000519894 KCNH5Q8NCM2 988 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms