RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 ITSN1Q15811 1721 aa15.69■□□□□ 0.1
PVT1-208ENST00000519481 ONECUT3O60422 494 aaPredicted RBP15.69■□□□□ 0.1
PVT1-208ENST00000519481 KRT27Q7Z3Y8 459 aa15.69■□□□□ 0.1
PVT1-208ENST00000519481 PRDM11Q9NQV5 511 aa15.69■□□□□ 0.1
PVT1-208ENST00000519481 CCDC61Q9Y6R9 512 aa15.69■□□□□ 0.1
PVT1-208ENST00000519481 BLMP54132 1417 aaPredicted RBP15.68■□□□□ 0.1
PVT1-208ENST00000519481 KIAA1210Q9ULL0 1709 aa15.68■□□□□ 0.1
PVT1-208ENST00000519481 ALS2Q96Q42 1657 aa15.68■□□□□ 0.1
PVT1-208ENST00000519481 ATP7BP35670 1465 aa15.68■□□□□ 0.1
PVT1-208ENST00000519481 NBPF1Q3BBV0 1214 aa15.67■□□□□ 0.1
PVT1-208ENST00000519481 COL14A1Q05707 1796 aaKnown RBP15.67■□□□□ 0.1
PVT1-208ENST00000519481 SRPK2P78362 688 aaKnown RBP15.66■□□□□ 0.1
PVT1-208ENST00000519481 FAM98CQ17RN3 349 aaKnown RBP15.66■□□□□ 0.1
PVT1-208ENST00000519481 ACEP12821 1306 aa15.66■□□□□ 0.1
PVT1-208ENST00000519481 CENPJQ9HC77 1338 aaPredicted RBP15.66■□□□□ 0.1
PVT1-208ENST00000519481 EP400Q96L91 3159 aa15.65■□□□□ 0.1
PVT1-208ENST00000519481 PLEKHG3A1L390 1219 aa15.65■□□□□ 0.1
PVT1-208ENST00000519481 NBPF8Q3BBV2 869 aa15.65■□□□□ 0.1
PVT1-208ENST00000519481 POLR3AO14802 1390 aaPredicted RBP15.64■□□□□ 0.09
PVT1-208ENST00000519481 BRWD3Q6RI45 1802 aa15.64■□□□□ 0.09
PVT1-208ENST00000519481 NUTM2GQ5VZR2 741 aa15.63■□□□□ 0.09
PVT1-208ENST00000519481 ABTB2Q8N961 1025 aa15.63■□□□□ 0.09
PVT1-208ENST00000519481 SPATA31A5Q5VU36 1347 aa15.63■□□□□ 0.09
PVT1-208ENST00000519481 SPATA31A7Q8IWB4 1347 aa15.63■□□□□ 0.09
PVT1-208ENST00000519481 KIAA0232Q92628 1395 aa15.62■□□□□ 0.09
PVT1-208ENST00000519481 ZC3H6P61129 1189 aaKnown RBP15.62■□□□□ 0.09
PVT1-208ENST00000519481 NRAPQ86VF7 1730 aa15.62■□□□□ 0.09
PVT1-208ENST00000519481 BAG6P46379 1132 aa15.61■□□□□ 0.09
PVT1-208ENST00000519481 EVA1CP58658 441 aa15.61■□□□□ 0.09
PVT1-208ENST00000519481 CHRNA2Q15822 529 aa15.61■□□□□ 0.09
PVT1-208ENST00000519481 DEFB132Q7Z7B7 95 aa15.61■□□□□ 0.09
PVT1-208ENST00000519481 L3MBTL2Q969R5 705 aa15.61■□□□□ 0.09
PVT1-208ENST00000519481 NLRP13Q86W25 1043 aa15.6■□□□□ 0.09
PVT1-208ENST00000519481 CABP2Q9NPB3 220 aa15.6■□□□□ 0.09
PVT1-208ENST00000519481 STRN4Q9NRL3 753 aa15.6■□□□□ 0.09
PVT1-208ENST00000519481 PPIP5K1Q6PFW1 1433 aa15.6■□□□□ 0.09
PVT1-208ENST00000519481 NEUROD1Q13562 356 aa15.59■□□□□ 0.09
PVT1-208ENST00000519481 TOPAZ1Q8N9V7 1692 aa15.58■□□□□ 0.08
PVT1-208ENST00000519481 CRYBG1Q9Y4K1 1723 aa15.58■□□□□ 0.08
PVT1-208ENST00000519481 BRD4O60885 1362 aaPredicted RBP15.58■□□□□ 0.08
PVT1-208ENST00000519481 SIN3AQ96ST3 1273 aa15.57■□□□□ 0.08
PVT1-208ENST00000519481 SPATA31A1Q5TZJ5 1347 aa15.57■□□□□ 0.08
PVT1-208ENST00000519481 EVC2Q86UK5 1308 aa15.57■□□□□ 0.08
PVT1-208ENST00000519481 PHRF1Q9P1Y6 1649 aaKnown RBP15.56■□□□□ 0.08
PVT1-208ENST00000519481 ROCK2O75116 1388 aaKnown RBP15.55■□□□□ 0.08
PVT1-208ENST00000519481 USP19O94966 1318 aa15.55■□□□□ 0.08
PVT1-208ENST00000519481 CABP1Q9NZU7 370 aa15.55■□□□□ 0.08
PVT1-208ENST00000519481 USP35Q9P2H5 1018 aa15.55■□□□□ 0.08
PVT1-208ENST00000519481 QRICH2Q9H0J4 1663 aa15.54■□□□□ 0.08
PVT1-208ENST00000519481 CPDO75976 1380 aa15.54■□□□□ 0.08
PVT1-208ENST00000519481 GCP02774 474 aa15.54■□□□□ 0.08
PVT1-208ENST00000519481 MSH5O43196 834 aa15.53■□□□□ 0.08
PVT1-208ENST00000519481 NLRP6P59044 892 aa15.53■□□□□ 0.08
PVT1-208ENST00000519481 FAM182BQ5T319 152 aa15.53■□□□□ 0.08
PVT1-208ENST00000519481 SSH2Q76I76 1423 aa15.52■□□□□ 0.08
PVT1-208ENST00000519481 ZBTB7CA1YPR0 619 aa15.52■□□□□ 0.08
PVT1-208ENST00000519481 PDE3BQ13370 1112 aa15.52■□□□□ 0.08
PVT1-208ENST00000519481 FAM196AQ6ZSG2 479 aa15.52■□□□□ 0.08
PVT1-208ENST00000519481 BARGINQ6ZT62 677 aa15.52■□□□□ 0.08
PVT1-208ENST00000519481 USP6P35125 1406 aa15.51■□□□□ 0.07
PVT1-208ENST00000519481 THSD7AQ9UPZ6 1657 aa15.51■□□□□ 0.07
PVT1-208ENST00000519481 NRKQ7Z2Y5 1582 aa15.51■□□□□ 0.07
PVT1-208ENST00000519481 LARP1Q6PKG0 1096 aaKnown RBP15.51■□□□□ 0.07
PVT1-208ENST00000519481 TCP11L2Q8N4U5 519 aa15.51■□□□□ 0.07
PVT1-208ENST00000519481 ZNF692Q9BU19 519 aaPredicted RBP15.51■□□□□ 0.07
PVT1-208ENST00000519481 EN1Q05925 392 aaPredicted RBP15.5■□□□□ 0.07
PVT1-208ENST00000519481 THRAP3Q9Y2W1 955 aaKnown RBP15.5■□□□□ 0.07
PVT1-208ENST00000519481 SRCAPQ6ZRS2 3230 aa15.5■□□□□ 0.07
PVT1-208ENST00000519481 TRPM1Q7Z4N2 1603 aa15.5■□□□□ 0.07
PVT1-208ENST00000519481 RGPD1P0DJD0 1748 aa15.49■□□□□ 0.07
PVT1-208ENST00000519481 CAMTA1Q9Y6Y1 1673 aa15.49■□□□□ 0.07
PVT1-208ENST00000519481 TRIM37O94972 964 aa15.48■□□□□ 0.07
PVT1-208ENST00000519481 DISP2A7MBM2 1401 aa15.46■□□□□ 0.07
PVT1-208ENST00000519481 PSDA5PKW4 1024 aaPredicted RBP15.46■□□□□ 0.07
PVT1-208ENST00000519481 C11orf95C9JLR9 678 aaPredicted RBP15.46■□□□□ 0.07
PVT1-208ENST00000519481 APBA3O96018 575 aa15.46■□□□□ 0.07
PVT1-208ENST00000519481 KCNH5Q8NCM2 988 aa15.46■□□□□ 0.07
PVT1-208ENST00000519481 AATKQ6ZMQ8 1374 aa15.46■□□□□ 0.07
PVT1-208ENST00000519481 TTC21BQ7Z4L5 1316 aa15.45■□□□□ 0.06
PVT1-208ENST00000519481 TTC21AQ8NDW8 1320 aa15.45■□□□□ 0.06
PVT1-208ENST00000519481 LMO7Q8WWI1 1683 aa15.45■□□□□ 0.06
PVT1-208ENST00000519481 CARD11Q9BXL7 1154 aa15.45■□□□□ 0.06
PVT1-208ENST00000519481 COL5A2P05997 1499 aaPredicted RBP15.45■□□□□ 0.06
PVT1-208ENST00000519481 CRB1P82279 1406 aa15.44■□□□□ 0.06
PVT1-208ENST00000519481 EZH2Q15910 746 aaKnown RBP15.44■□□□□ 0.06
PVT1-208ENST00000519481 TOM1L2Q6ZVM7 507 aa15.44■□□□□ 0.06
PVT1-208ENST00000519481 TONSLQ96HA7 1378 aa15.44■□□□□ 0.06
PVT1-208ENST00000519481 SLIT3O75094 1523 aa15.43■□□□□ 0.06
PVT1-208ENST00000519481 KTN1Q86UP2 1357 aaKnown RBP15.43■□□□□ 0.06
PVT1-208ENST00000519481 PARD3Q8TEW0 1356 aa15.43■□□□□ 0.06
PVT1-208ENST00000519481 CAMKK2Q96RR4 588 aa15.42■□□□□ 0.06
PVT1-208ENST00000519481 SBNO2Q9Y2G9 1366 aa15.41■□□□□ 0.06
PVT1-208ENST00000519481 SOX12O15370 315 aa15.41■□□□□ 0.06
PVT1-208ENST00000519481 CSB-PGBD3P0DP91 1061 aa15.41■□□□□ 0.06
PVT1-208ENST00000519481 R3HDM1Q15032 1099 aaKnown RBP15.41■□□□□ 0.06
PVT1-208ENST00000519481 TNS1Q9HBL0 1735 aaKnown RBP15.4■□□□□ 0.06
PVT1-208ENST00000519481 DDB1Q16531 1140 aa15.4■□□□□ 0.06
PVT1-208ENST00000519481 ARHGEF25Q86VW2 580 aa15.4■□□□□ 0.06
PVT1-208ENST00000519481 TMC1Q8TDI8 760 aa15.4■□□□□ 0.06
PVT1-208ENST00000519481 CDCA7Q9BWT1 371 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms