RNA–Protein interactions for RNA: ENST00000519414.5

CHMP7-204, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 914 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-204ENST00000519414 MYT1Q01538 1121 aa28.19■■■□□ 2.1
CHMP7-204ENST00000519414 FAM98CQ17RN3 349 aaKnown RBP28.18■■■□□ 2.1
CHMP7-204ENST00000519414 ALS2Q96Q42 1657 aa28.17■■■□□ 2.1
CHMP7-204ENST00000519414 PAK3O75914 559 aaPredicted RBP28.16■■■□□ 2.1
CHMP7-204ENST00000519414 COL14A1Q05707 1796 aaKnown RBP28.14■■■□□ 2.1
CHMP7-204ENST00000519414 NRAPQ86VF7 1730 aa28.14■■■□□ 2.1
CHMP7-204ENST00000519414 NUDT16Q96DE0 195 aaKnown RBP28.13■■■□□ 2.09
CHMP7-204ENST00000519414 SPATA31A5Q5VU36 1347 aa28.13■■■□□ 2.09
CHMP7-204ENST00000519414 SPATA31A7Q8IWB4 1347 aa28.13■■■□□ 2.09
CHMP7-204ENST00000519414 PRDM11Q9NQV5 511 aa28.12■■■□□ 2.09
CHMP7-204ENST00000519414 BAG6P46379 1132 aa28.11■■■□□ 2.09
CHMP7-204ENST00000519414 ATP7BP35670 1465 aa28.1■■■□□ 2.09
CHMP7-204ENST00000519414 CDK19Q9BWU1 502 aa28.07■■■□□ 2.08
CHMP7-204ENST00000519414 ARHGEF28Q8N1W1 1705 aaKnown RBP28.06■■■□□ 2.08
CHMP7-204ENST00000519414 CRYBG1Q9Y4K1 1723 aa28.05■■■□□ 2.08
CHMP7-204ENST00000519414 KIAA0232Q92628 1395 aa28.04■■■□□ 2.08
CHMP7-204ENST00000519414 CCDC61Q9Y6R9 512 aa28.03■■■□□ 2.08
CHMP7-204ENST00000519414 POLR3AO14802 1390 aaPredicted RBP28.02■■■□□ 2.08
CHMP7-204ENST00000519414 SPATA31A1Q5TZJ5 1347 aa28.02■■■□□ 2.08
CHMP7-204ENST00000519414 ITSN1Q15811 1721 aa28.02■■■□□ 2.08
CHMP7-204ENST00000519414 FAM182BQ5T319 152 aa28.02■■■□□ 2.08
CHMP7-204ENST00000519414 ACEP12821 1306 aa28.01■■■□□ 2.07
CHMP7-204ENST00000519414 CHRNA2Q15822 529 aa28.01■■■□□ 2.07
CHMP7-204ENST00000519414 PLEKHG3A1L390 1219 aa28■■■□□ 2.07
CHMP7-204ENST00000519414 NBPF8Q3BBV2 869 aa28■■■□□ 2.07
CHMP7-204ENST00000519414 ZC3H6P61129 1189 aaKnown RBP27.99■■■□□ 2.07
CHMP7-204ENST00000519414 EN1Q05925 392 aaPredicted RBP27.99■■■□□ 2.07
CHMP7-204ENST00000519414 NUTM2GQ5VZR2 741 aa27.99■■■□□ 2.07
CHMP7-204ENST00000519414 THSD7AQ9UPZ6 1657 aa27.99■■■□□ 2.07
CHMP7-204ENST00000519414 STRN4Q9NRL3 753 aa27.98■■■□□ 2.07
CHMP7-204ENST00000519414 PSDA5PKW4 1024 aaPredicted RBP27.97■■■□□ 2.07
CHMP7-204ENST00000519414 DISP2A7MBM2 1401 aa27.95■■■□□ 2.07
CHMP7-204ENST00000519414 LRP5O75197 1615 aa27.94■■■□□ 2.06
CHMP7-204ENST00000519414 NBPF1Q3BBV0 1214 aa27.94■■■□□ 2.06
CHMP7-204ENST00000519414 FAM196AQ6ZSG2 479 aa27.94■■■□□ 2.06
CHMP7-204ENST00000519414 ABTB2Q8N961 1025 aa27.94■■■□□ 2.06
CHMP7-204ENST00000519414 PHRF1Q9P1Y6 1649 aaKnown RBP27.93■■■□□ 2.06
CHMP7-204ENST00000519414 RGPD1P0DJD0 1748 aa27.93■■■□□ 2.06
CHMP7-204ENST00000519414 EVA1CP58658 441 aa27.93■■■□□ 2.06
CHMP7-204ENST00000519414 KIAA1210Q9ULL0 1709 aa27.92■■■□□ 2.06
CHMP7-204ENST00000519414 TOPAZ1Q8N9V7 1692 aa27.92■■■□□ 2.06
CHMP7-204ENST00000519414 BARGINQ6ZT62 677 aa27.91■■■□□ 2.06
CHMP7-204ENST00000519414 USP35Q9P2H5 1018 aa27.9■■■□□ 2.06
CHMP7-204ENST00000519414 SSH2Q76I76 1423 aa27.9■■■□□ 2.06
CHMP7-204ENST00000519414 CPDO75976 1380 aa27.89■■■□□ 2.06
CHMP7-204ENST00000519414 SRPK2P78362 688 aaKnown RBP27.89■■■□□ 2.06
CHMP7-204ENST00000519414 USP19O94966 1318 aa27.89■■■□□ 2.05
CHMP7-204ENST00000519414 TRIM37O94972 964 aa27.88■■■□□ 2.05
CHMP7-204ENST00000519414 CENPJQ9HC77 1338 aaPredicted RBP27.88■■■□□ 2.05
CHMP7-204ENST00000519414 EZH2Q15910 746 aaKnown RBP27.87■■■□□ 2.05
CHMP7-204ENST00000519414 NLRP13Q86W25 1043 aa27.87■■■□□ 2.05
CHMP7-204ENST00000519414 PDE3BQ13370 1112 aa27.86■■■□□ 2.05
CHMP7-204ENST00000519414 R3HDM1Q15032 1099 aaKnown RBP27.86■■■□□ 2.05
CHMP7-204ENST00000519414 CAMKK2Q96RR4 588 aa27.86■■■□□ 2.05
CHMP7-204ENST00000519414 NRKQ7Z2Y5 1582 aa27.86■■■□□ 2.05
CHMP7-204ENST00000519414 PPIP5K1Q6PFW1 1433 aa27.85■■■□□ 2.05
CHMP7-204ENST00000519414 LARP1Q6PKG0 1096 aaKnown RBP27.85■■■□□ 2.05
CHMP7-204ENST00000519414 TCP11L2Q8N4U5 519 aa27.85■■■□□ 2.05
CHMP7-204ENST00000519414 CAMTA1Q9Y6Y1 1673 aa27.84■■■□□ 2.05
CHMP7-204ENST00000519414 GCP02774 474 aa27.84■■■□□ 2.05
CHMP7-204ENST00000519414 CABP2Q9NPB3 220 aa27.84■■■□□ 2.05
CHMP7-204ENST00000519414 BRD4O60885 1362 aaPredicted RBP27.84■■■□□ 2.05
CHMP7-204ENST00000519414 TNS1Q9HBL0 1735 aaKnown RBP27.84■■■□□ 2.05
CHMP7-204ENST00000519414 APBA3O96018 575 aa27.83■■■□□ 2.05
CHMP7-204ENST00000519414 THRAP3Q9Y2W1 955 aaKnown RBP27.82■■■□□ 2.04
CHMP7-204ENST00000519414 PARD3Q8TEW0 1356 aa27.82■■■□□ 2.04
CHMP7-204ENST00000519414 LMO7Q8WWI1 1683 aa27.79■■■□□ 2.04
CHMP7-204ENST00000519414 CABP1Q9NZU7 370 aa27.78■■■□□ 2.04
CHMP7-204ENST00000519414 COL5A2P05997 1499 aaPredicted RBP27.75■■■□□ 2.03
CHMP7-204ENST00000519414 USP6P35125 1406 aa27.75■■■□□ 2.03
CHMP7-204ENST00000519414 NLRP6P59044 892 aa27.74■■■□□ 2.03
CHMP7-204ENST00000519414 C11orf95C9JLR9 678 aaPredicted RBP27.73■■■□□ 2.03
CHMP7-204ENST00000519414 L3MBTL2Q969R5 705 aa27.73■■■□□ 2.03
CHMP7-204ENST00000519414 CRB1P82279 1406 aa27.72■■■□□ 2.03
CHMP7-204ENST00000519414 AATKQ6ZMQ8 1374 aa27.72■■■□□ 2.03
CHMP7-204ENST00000519414 EVC2Q86UK5 1308 aa27.7■■■□□ 2.03
CHMP7-204ENST00000519414 ZBTB7CA1YPR0 619 aa27.7■■■□□ 2.02
CHMP7-204ENST00000519414 NBPF14Q5TI25 921 aa27.7■■■□□ 2.02
CHMP7-204ENST00000519414 QRICH2Q9H0J4 1663 aa27.69■■■□□ 2.02
CHMP7-204ENST00000519414 SLIT3O75094 1523 aa27.67■■■□□ 2.02
CHMP7-204ENST00000519414 PARP4Q9UKK3 1724 aaKnown RBP27.65■■■□□ 2.02
CHMP7-204ENST00000519414 ZNF692Q9BU19 519 aaPredicted RBP27.65■■■□□ 2.02
CHMP7-204ENST00000519414 TOM1L2Q6ZVM7 507 aa27.64■■■□□ 2.02
CHMP7-204ENST00000519414 RREB1Q92766 1687 aa27.64■■■□□ 2.02
CHMP7-204ENST00000519414 OVOS2A0A0G2JMS6 1433 aa27.63■■■□□ 2.01
CHMP7-204ENST00000519414 OVOS2A0A0J9YW53 1432 aa27.63■■■□□ 2.01
CHMP7-204ENST00000519414 OVOS2Q6IE36 1432 aa27.63■■■□□ 2.01
CHMP7-204ENST00000519414 TRIM26Q12899 539 aaPredicted RBP27.62■■■□□ 2.01
CHMP7-204ENST00000519414 DDB1Q16531 1140 aa27.62■■■□□ 2.01
CHMP7-204ENST00000519414 SIN3AQ96ST3 1273 aa27.61■■■□□ 2.01
CHMP7-204ENST00000519414 AXIN2Q9Y2T1 843 aa27.61■■■□□ 2.01
CHMP7-204ENST00000519414 TTC21BQ7Z4L5 1316 aa27.61■■■□□ 2.01
CHMP7-204ENST00000519414 KCNH5Q8NCM2 988 aa27.6■■■□□ 2.01
CHMP7-204ENST00000519414 WDR17Q8IZU2 1322 aa27.6■■■□□ 2.01
CHMP7-204ENST00000519414 ROCK2O75116 1388 aaKnown RBP27.6■■■□□ 2.01
CHMP7-204ENST00000519414 NUP188Q5SRE5 1749 aa27.59■■■□□ 2.01
CHMP7-204ENST00000519414 ARHGEF25Q86VW2 580 aa27.59■■■□□ 2.01
CHMP7-204ENST00000519414 PIK3C2AO00443 1686 aa27.59■■■□□ 2.01
CHMP7-204ENST00000519414 CDCA7Q9BWT1 371 aaPredicted RBP27.58■■■□□ 2.01
CHMP7-204ENST00000519414 CPSF1Q10570 1443 aaKnown RBP27.58■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms