RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 BTG4Q9NY30 223 aa23.06■■□□□ 1.28
VPS37A-204ENST00000519381 COL14A1Q05707 1796 aaKnown RBP23.06■■□□□ 1.28
VPS37A-204ENST00000519381 KRT27Q7Z3Y8 459 aa23.05■■□□□ 1.28
VPS37A-204ENST00000519381 NUDT16Q96DE0 195 aaKnown RBP23.02■■□□□ 1.28
VPS37A-204ENST00000519381 PRDM11Q9NQV5 511 aa23.02■■□□□ 1.28
VPS37A-204ENST00000519381 NRAPQ86VF7 1730 aa23.02■■□□□ 1.28
VPS37A-204ENST00000519381 ATP7BP35670 1465 aa23.01■■□□□ 1.27
VPS37A-204ENST00000519381 FAM98CQ17RN3 349 aaKnown RBP23.01■■□□□ 1.27
VPS37A-204ENST00000519381 KIAA1210Q9ULL0 1709 aa22.99■■□□□ 1.27
VPS37A-204ENST00000519381 CDK19Q9BWU1 502 aa22.98■■□□□ 1.27
VPS37A-204ENST00000519381 ONECUT3O60422 494 aaPredicted RBP22.97■■□□□ 1.27
VPS37A-204ENST00000519381 DEFB132Q7Z7B7 95 aa22.97■■□□□ 1.27
VPS37A-204ENST00000519381 BAG6P46379 1132 aa22.95■■□□□ 1.26
VPS37A-204ENST00000519381 CRYBG1Q9Y4K1 1723 aa22.95■■□□□ 1.26
VPS37A-204ENST00000519381 PHRF1Q9P1Y6 1649 aaKnown RBP22.93■■□□□ 1.26
VPS37A-204ENST00000519381 KIAA0232Q92628 1395 aa22.93■■□□□ 1.26
VPS37A-204ENST00000519381 STRN4Q9NRL3 753 aa22.93■■□□□ 1.26
VPS37A-204ENST00000519381 CCDC61Q9Y6R9 512 aa22.93■■□□□ 1.26
VPS37A-204ENST00000519381 TOPAZ1Q8N9V7 1692 aa22.93■■□□□ 1.26
VPS37A-204ENST00000519381 SRCAPQ6ZRS2 3230 aa22.93■■□□□ 1.26
VPS37A-204ENST00000519381 ACEP12821 1306 aa22.92■■□□□ 1.26
VPS37A-204ENST00000519381 SPATA31A5Q5VU36 1347 aa22.92■■□□□ 1.26
VPS37A-204ENST00000519381 SPATA31A7Q8IWB4 1347 aa22.92■■□□□ 1.26
VPS37A-204ENST00000519381 SRPK2P78362 688 aaKnown RBP22.92■■□□□ 1.26
VPS37A-204ENST00000519381 NUTM2GQ5VZR2 741 aa22.92■■□□□ 1.26
VPS37A-204ENST00000519381 ZC3H6P61129 1189 aaKnown RBP22.9■■□□□ 1.26
VPS37A-204ENST00000519381 CHRNA2Q15822 529 aa22.9■■□□□ 1.26
VPS37A-204ENST00000519381 CENPJQ9HC77 1338 aaPredicted RBP22.89■■□□□ 1.26
VPS37A-204ENST00000519381 POLR3AO14802 1390 aaPredicted RBP22.89■■□□□ 1.25
VPS37A-204ENST00000519381 RGPD1P0DJD0 1748 aa22.88■■□□□ 1.25
VPS37A-204ENST00000519381 EVA1CP58658 441 aa22.88■■□□□ 1.25
VPS37A-204ENST00000519381 NBPF8Q3BBV2 869 aa22.88■■□□□ 1.25
VPS37A-204ENST00000519381 ABTB2Q8N961 1025 aa22.88■■□□□ 1.25
VPS37A-204ENST00000519381 NBPF1Q3BBV0 1214 aa22.87■■□□□ 1.25
VPS37A-204ENST00000519381 PPIP5K1Q6PFW1 1433 aa22.86■■□□□ 1.25
VPS37A-204ENST00000519381 THSD7AQ9UPZ6 1657 aa22.85■■□□□ 1.25
VPS37A-204ENST00000519381 PLEKHG3A1L390 1219 aa22.85■■□□□ 1.25
VPS37A-204ENST00000519381 USP35Q9P2H5 1018 aa22.85■■□□□ 1.25
VPS37A-204ENST00000519381 SPATA31A1Q5TZJ5 1347 aa22.84■■□□□ 1.25
VPS37A-204ENST00000519381 QRICH2Q9H0J4 1663 aa22.84■■□□□ 1.25
VPS37A-204ENST00000519381 FAM182BQ5T319 152 aa22.84■■□□□ 1.25
VPS37A-204ENST00000519381 NRKQ7Z2Y5 1582 aa22.84■■□□□ 1.25
VPS37A-204ENST00000519381 NLRP13Q86W25 1043 aa22.82■■□□□ 1.24
VPS37A-204ENST00000519381 CABP2Q9NPB3 220 aa22.82■■□□□ 1.24
VPS37A-204ENST00000519381 SSH2Q76I76 1423 aa22.81■■□□□ 1.24
VPS37A-204ENST00000519381 ZBTB7CA1YPR0 619 aa22.8■■□□□ 1.24
VPS37A-204ENST00000519381 PSDA5PKW4 1024 aaPredicted RBP22.79■■□□□ 1.24
VPS37A-204ENST00000519381 EN1Q05925 392 aaPredicted RBP22.79■■□□□ 1.24
VPS37A-204ENST00000519381 PDE3BQ13370 1112 aa22.79■■□□□ 1.24
VPS37A-204ENST00000519381 BRD4O60885 1362 aaPredicted RBP22.78■■□□□ 1.24
VPS37A-204ENST00000519381 FAM196AQ6ZSG2 479 aa22.78■■□□□ 1.24
VPS37A-204ENST00000519381 USP19O94966 1318 aa22.78■■□□□ 1.24
VPS37A-204ENST00000519381 CPDO75976 1380 aa22.76■■□□□ 1.23
VPS37A-204ENST00000519381 L3MBTL2Q969R5 705 aa22.76■■□□□ 1.23
VPS37A-204ENST00000519381 EVC2Q86UK5 1308 aa22.76■■□□□ 1.23
VPS37A-204ENST00000519381 TNS1Q9HBL0 1735 aaKnown RBP22.75■■□□□ 1.23
VPS37A-204ENST00000519381 TCP11L2Q8N4U5 519 aa22.75■■□□□ 1.23
VPS37A-204ENST00000519381 ROCK2O75116 1388 aaKnown RBP22.75■■□□□ 1.23
VPS37A-204ENST00000519381 LRP5O75197 1615 aa22.75■■□□□ 1.23
VPS37A-204ENST00000519381 TRIM37O94972 964 aa22.74■■□□□ 1.23
VPS37A-204ENST00000519381 GCP02774 474 aa22.74■■□□□ 1.23
VPS37A-204ENST00000519381 NEUROD1Q13562 356 aa22.74■■□□□ 1.23
VPS37A-204ENST00000519381 LARP1Q6PKG0 1096 aaKnown RBP22.74■■□□□ 1.23
VPS37A-204ENST00000519381 BARGINQ6ZT62 677 aa22.74■■□□□ 1.23
VPS37A-204ENST00000519381 CABP1Q9NZU7 370 aa22.74■■□□□ 1.23
VPS37A-204ENST00000519381 CAMTA1Q9Y6Y1 1673 aa22.74■■□□□ 1.23
VPS37A-204ENST00000519381 USP6P35125 1406 aa22.74■■□□□ 1.23
VPS37A-204ENST00000519381 NLRP6P59044 892 aa22.73■■□□□ 1.23
VPS37A-204ENST00000519381 DISP2A7MBM2 1401 aa22.73■■□□□ 1.23
VPS37A-204ENST00000519381 LMO7Q8WWI1 1683 aa22.72■■□□□ 1.23
VPS37A-204ENST00000519381 TRPM1Q7Z4N2 1603 aa22.71■■□□□ 1.23
VPS37A-204ENST00000519381 APBA3O96018 575 aa22.71■■□□□ 1.23
VPS37A-204ENST00000519381 THRAP3Q9Y2W1 955 aaKnown RBP22.71■■□□□ 1.23
VPS37A-204ENST00000519381 R3HDM1Q15032 1099 aaKnown RBP22.7■■□□□ 1.22
VPS37A-204ENST00000519381 EZH2Q15910 746 aaKnown RBP22.7■■□□□ 1.22
VPS37A-204ENST00000519381 COL5A2P05997 1499 aaPredicted RBP22.69■■□□□ 1.22
VPS37A-204ENST00000519381 SIN3AQ96ST3 1273 aa22.69■■□□□ 1.22
VPS37A-204ENST00000519381 PARD3Q8TEW0 1356 aa22.68■■□□□ 1.22
VPS37A-204ENST00000519381 CRB1P82279 1406 aa22.67■■□□□ 1.22
VPS37A-204ENST00000519381 C11orf95C9JLR9 678 aaPredicted RBP22.65■■□□□ 1.22
VPS37A-204ENST00000519381 TOM1L2Q6ZVM7 507 aa22.65■■□□□ 1.22
VPS37A-204ENST00000519381 SLIT3O75094 1523 aa22.65■■□□□ 1.22
VPS37A-204ENST00000519381 ZNF692Q9BU19 519 aaPredicted RBP22.64■■□□□ 1.21
VPS37A-204ENST00000519381 PARP4Q9UKK3 1724 aaKnown RBP22.64■■□□□ 1.21
VPS37A-204ENST00000519381 PIK3C2AO00443 1686 aa22.64■■□□□ 1.21
VPS37A-204ENST00000519381 AATKQ6ZMQ8 1374 aa22.63■■□□□ 1.21
VPS37A-204ENST00000519381 SOX12O15370 315 aa22.62■■□□□ 1.21
VPS37A-204ENST00000519381 NBPF14Q5TI25 921 aa22.62■■□□□ 1.21
VPS37A-204ENST00000519381 KCNH5Q8NCM2 988 aa22.62■■□□□ 1.21
VPS37A-204ENST00000519381 CAMKK2Q96RR4 588 aa22.62■■□□□ 1.21
VPS37A-204ENST00000519381 OVOS2A0A0G2JMS6 1433 aa22.61■■□□□ 1.21
VPS37A-204ENST00000519381 OVOS2A0A0J9YW53 1432 aa22.61■■□□□ 1.21
VPS37A-204ENST00000519381 OVOS2Q6IE36 1432 aa22.61■■□□□ 1.21
VPS37A-204ENST00000519381 CPSF1Q10570 1443 aaKnown RBP22.6■■□□□ 1.21
VPS37A-204ENST00000519381 CSB-PGBD3P0DP91 1061 aa22.6■■□□□ 1.21
VPS37A-204ENST00000519381 TTC21BQ7Z4L5 1316 aa22.59■■□□□ 1.21
VPS37A-204ENST00000519381 TTC21AQ8NDW8 1320 aa22.59■■□□□ 1.21
VPS37A-204ENST00000519381 AKAP12Q02952 1782 aa22.59■■□□□ 1.21
VPS37A-204ENST00000519381 DDB1Q16531 1140 aa22.59■■□□□ 1.21
VPS37A-204ENST00000519381 KTN1Q86UP2 1357 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms