RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 TTC21AQ8NDW8 1320 aa20.17■□□□□ 0.82
PABPC1-210ENST00000519363 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
PABPC1-210ENST00000519363 OVOS2A0A0J9YW53 1432 aa20.16■□□□□ 0.82
PABPC1-210ENST00000519363 OVOS2Q6IE36 1432 aa20.16■□□□□ 0.82
PABPC1-210ENST00000519363 NGDNQ8NEJ9 315 aaKnown RBP20.15■□□□□ 0.82
PABPC1-210ENST00000519363 INSRP06213 1382 aa20.15■□□□□ 0.82
PABPC1-210ENST00000519363 MARF1Q9Y4F3 1742 aaKnown RBP20.14■□□□□ 0.81
PABPC1-210ENST00000519363 LTBP4Q8N2S1 1624 aa20.14■□□□□ 0.81
PABPC1-210ENST00000519363 ATF3P18847 181 aa20.14■□□□□ 0.81
PABPC1-210ENST00000519363 CADPS2Q86UW7 1296 aa20.14■□□□□ 0.81
PABPC1-210ENST00000519363 PMFBP1Q8TBY8 1022 aa20.14■□□□□ 0.81
PABPC1-210ENST00000519363 PNISRQ8TF01 805 aaKnown RBP20.14■□□□□ 0.81
PABPC1-210ENST00000519363 GGNBP2Q9H3C7 697 aa20.14■□□□□ 0.81
PABPC1-210ENST00000519363 TRPM3Q9HCF6 1732 aaPredicted RBP20.13■□□□□ 0.81
PABPC1-210ENST00000519363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.13■□□□□ 0.81
PABPC1-210ENST00000519363 SMG6Q86US8 1419 aaKnown RBP20.12■□□□□ 0.81
PABPC1-210ENST00000519363 USP31Q70CQ4 1352 aa20.12■□□□□ 0.81
PABPC1-210ENST00000519363 YTHDC1Q96MU7 727 aaKnown RBP20.12■□□□□ 0.81
PABPC1-210ENST00000519363 SHPRHQ149N8 1683 aa20.12■□□□□ 0.81
PABPC1-210ENST00000519363 MAP2P11137 1827 aaKnown RBP20.11■□□□□ 0.81
PABPC1-210ENST00000519363 NME9Q86XW9 330 aa20.11■□□□□ 0.81
PABPC1-210ENST00000519363 AATKQ6ZMQ8 1374 aa20.1■□□□□ 0.81
PABPC1-210ENST00000519363 ESCO1Q5FWF5 840 aa20.1■□□□□ 0.81
PABPC1-210ENST00000519363 COG3Q96JB2 828 aa20.08■□□□□ 0.81
PABPC1-210ENST00000519363 COL3A1P02461 1466 aaPredicted RBP20.07■□□□□ 0.8
PABPC1-210ENST00000519363 FAM9BQ8IZU0 186 aa20.07■□□□□ 0.8
PABPC1-210ENST00000519363 ALS2Q96Q42 1657 aa20.07■□□□□ 0.8
PABPC1-210ENST00000519363 BLMP54132 1417 aaPredicted RBP20.06■□□□□ 0.8
PABPC1-210ENST00000519363 ORAI2Q96SN7 254 aa20.06■□□□□ 0.8
PABPC1-210ENST00000519363 CDK12Q9NYV4 1490 aaPredicted RBP20.05■□□□□ 0.8
PABPC1-210ENST00000519363 TNNT2P45379 298 aaPredicted RBP20.04■□□□□ 0.8
PABPC1-210ENST00000519363 PNPLA6Q8IY17 1366 aa20.04■□□□□ 0.8
PABPC1-210ENST00000519363 CENPBP07199 599 aaPredicted RBP20.03■□□□□ 0.8
PABPC1-210ENST00000519363 MTHFSP49914 203 aa20.03■□□□□ 0.8
PABPC1-210ENST00000519363 CFAP53Q96M91 514 aa20.03■□□□□ 0.8
PABPC1-210ENST00000519363 NHSL1Q5SYE7 1610 aa20.02■□□□□ 0.8
PABPC1-210ENST00000519363 ZRANB1Q9UGI0 708 aa20.02■□□□□ 0.8
PABPC1-210ENST00000519363 PXDNQ92626 1479 aa20.01■□□□□ 0.79
PABPC1-210ENST00000519363 PSME1Q06323 249 aa20.01■□□□□ 0.79
PABPC1-210ENST00000519363 SLIT3O75094 1523 aa20■□□□□ 0.79
PABPC1-210ENST00000519363 NPHP3Q7Z494 1330 aa20■□□□□ 0.79
PABPC1-210ENST00000519363 SBNO1A3KN83 1393 aa19.99■□□□□ 0.79
PABPC1-210ENST00000519363 PHRF1Q9P1Y6 1649 aaKnown RBP19.99■□□□□ 0.79
PABPC1-210ENST00000519363 WDR43Q15061 677 aaKnown RBP eCLIP19.99■□□□□ 0.79
PABPC1-210ENST00000519363 PEAK1Q9H792 1746 aa19.99■□□□□ 0.79
PABPC1-210ENST00000519363 NFAT5O94916 1531 aa19.98■□□□□ 0.79
PABPC1-210ENST00000519363 FOXO3O43524 673 aa19.98■□□□□ 0.79
PABPC1-210ENST00000519363 POLKQ9UBT6 870 aa19.98■□□□□ 0.79
PABPC1-210ENST00000519363 MED1Q15648 1581 aaPredicted RBP19.97■□□□□ 0.79
PABPC1-210ENST00000519363 HNRNPUQ00839 825 aaKnown RBP eCLIP19.97■□□□□ 0.79
PABPC1-210ENST00000519363 SLAIN2Q9P270 581 aa19.97■□□□□ 0.79
PABPC1-210ENST00000519363 CRYBG1Q9Y4K1 1723 aa19.96■□□□□ 0.79
PABPC1-210ENST00000519363 LTN1O94822 1766 aa19.96■□□□□ 0.79
PABPC1-210ENST00000519363 BRINP3Q76B58 766 aa19.96■□□□□ 0.79
PABPC1-210ENST00000519363 KRT28Q7Z3Y7 464 aa19.96■□□□□ 0.79
PABPC1-210ENST00000519363 ABTB2Q8N961 1025 aa19.96■□□□□ 0.79
PABPC1-210ENST00000519363 ZBED9Q6R2W3 1325 aa19.96■□□□□ 0.79
PABPC1-210ENST00000519363 KIF24Q5T7B8 1368 aa19.95■□□□□ 0.79
PABPC1-210ENST00000519363 TNS3Q68CZ2 1445 aa19.95■□□□□ 0.78
PABPC1-210ENST00000519363 PAK3O75914 559 aaPredicted RBP19.95■□□□□ 0.78
PABPC1-210ENST00000519363 NLRP6P59044 892 aa19.95■□□□□ 0.78
PABPC1-210ENST00000519363 AEBP2Q6ZN18 517 aaPredicted RBP19.95■□□□□ 0.78
PABPC1-210ENST00000519363 ADAMTS8Q9UP79 889 aa19.94■□□□□ 0.78
PABPC1-210ENST00000519363 USP19O94966 1318 aa19.94■□□□□ 0.78
PABPC1-210ENST00000519363 IQSEC2Q5JU85 1478 aa19.93■□□□□ 0.78
PABPC1-210ENST00000519363 EMILIN1Q9Y6C2 1016 aa19.93■□□□□ 0.78
PABPC1-210ENST00000519363 ROBO1Q9Y6N7 1651 aa19.92■□□□□ 0.78
PABPC1-210ENST00000519363 RTL1A6NKG5 1358 aa19.92■□□□□ 0.78
PABPC1-210ENST00000519363 AHDC1Q5TGY3 1603 aaPredicted RBP19.91■□□□□ 0.78
PABPC1-210ENST00000519363 RGPD1P0DJD0 1748 aa19.9■□□□□ 0.78
PABPC1-210ENST00000519363 RRS1Q15050 365 aaKnown RBP19.9■□□□□ 0.78
PABPC1-210ENST00000519363 NUDCQ9Y266 331 aa19.9■□□□□ 0.78
PABPC1-210ENST00000519363 ARHGEF10O15013 1369 aa19.9■□□□□ 0.78
PABPC1-210ENST00000519363 FLT4P35916 1363 aa19.9■□□□□ 0.78
PABPC1-210ENST00000519363 DIAPH1O60610 1272 aaKnown RBP19.89■□□□□ 0.77
PABPC1-210ENST00000519363 FBLN1P23142 703 aa19.89■□□□□ 0.77
PABPC1-210ENST00000519363 XPCQ01831 940 aaPredicted RBP19.89■□□□□ 0.77
PABPC1-210ENST00000519363 SOS2Q07890 1332 aaPredicted RBP19.89■□□□□ 0.77
PABPC1-210ENST00000519363 MAP3K19Q56UN5 1328 aa19.88■□□□□ 0.77
PABPC1-210ENST00000519363 KCNH5Q8NCM2 988 aa19.88■□□□□ 0.77
PABPC1-210ENST00000519363 ABCA3Q99758 1704 aa19.88■□□□□ 0.77
PABPC1-210ENST00000519363 SPATA31A3Q5VYP0 1347 aa19.87■□□□□ 0.77
PABPC1-210ENST00000519363 ABCC6O95255 1503 aa19.86■□□□□ 0.77
PABPC1-210ENST00000519363 NUTM2GQ5VZR2 741 aa19.86■□□□□ 0.77
PABPC1-210ENST00000519363 PPM1GO15355 546 aaPredicted RBP19.85■□□□□ 0.77
PABPC1-210ENST00000519363 IL13P35225 146 aa19.84■□□□□ 0.77
PABPC1-210ENST00000519363 DDX17Q92841 729 aaKnown RBP19.84■□□□□ 0.77
PABPC1-210ENST00000519363 NGEFQ8N5V2 710 aa19.83■□□□□ 0.77
PABPC1-210ENST00000519363 U2AF1L5P0DN76 240 aaPredicted RBP19.82■□□□□ 0.76
PABPC1-210ENST00000519363 U2AF1Q01081 240 aaKnown RBP eCLIP19.82■□□□□ 0.76
PABPC1-210ENST00000519363 SOX12O15370 315 aa19.81■□□□□ 0.76
PABPC1-210ENST00000519363 RUNDC1Q96C34 613 aa19.81■□□□□ 0.76
PABPC1-210ENST00000519363 COL22A1Q8NFW1 1626 aaPredicted RBP19.8■□□□□ 0.76
PABPC1-210ENST00000519363 U2SURPO15042 1029 aaKnown RBP19.8■□□□□ 0.76
PABPC1-210ENST00000519363 GCP02774 474 aa19.8■□□□□ 0.76
PABPC1-210ENST00000519363 EIF4A2Q14240 407 aaKnown RBP19.8■□□□□ 0.76
PABPC1-210ENST00000519363 NCBP3Q53F19 620 aaKnown RBP19.8■□□□□ 0.76
PABPC1-210ENST00000519363 LMOD2Q6P5Q4 547 aa19.8■□□□□ 0.76
PABPC1-210ENST00000519363 HOXC9P31274 260 aa19.79■□□□□ 0.76
PABPC1-210ENST00000519363 AMPHP49418 695 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms