RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 FGD6Q6ZV73 1430 aa12.06□□□□□ -0.48
CDKL3-203ENST00000519312 IDI1Q13907 227 aa12.06□□□□□ -0.48
CDKL3-203ENST00000519312 ZNF687Q8N1G0 1237 aa12.06□□□□□ -0.48
CDKL3-203ENST00000519312 PTCD2Q8WV60 388 aaKnown RBP12.06□□□□□ -0.48
CDKL3-203ENST00000519312 ANKRD30AQ9BXX3 1397 aa12.05□□□□□ -0.48
CDKL3-203ENST00000519312 BBXQ8WY36 941 aaPredicted RBP12.05□□□□□ -0.48
CDKL3-203ENST00000519312 LHX6Q9UPM6 363 aa12.05□□□□□ -0.48
CDKL3-203ENST00000519312 ZFYVE9O95405 1425 aa12.04□□□□□ -0.48
CDKL3-203ENST00000519312 NCOA3Q9Y6Q9 1424 aa12.04□□□□□ -0.48
CDKL3-203ENST00000519312 RRP7BPQ9NSQ0 103 aa12.04□□□□□ -0.48
CDKL3-203ENST00000519312 SLC52A1Q9NWF4 448 aa12.04□□□□□ -0.48
CDKL3-203ENST00000519312 PDE4AP27815 886 aa12.03□□□□□ -0.48
CDKL3-203ENST00000519312 PPP1R15BQ5SWA1 713 aa12.03□□□□□ -0.48
CDKL3-203ENST00000519312 MSH6P52701 1360 aa12.03□□□□□ -0.48
CDKL3-203ENST00000519312 PLEKHG1Q9ULL1 1385 aa12.03□□□□□ -0.48
CDKL3-203ENST00000519312 MMRN1Q13201 1228 aa12.02□□□□□ -0.49
CDKL3-203ENST00000519312 POTEAQ6S8J7 498 aa12.02□□□□□ -0.49
CDKL3-203ENST00000519312 CADPS2Q86UW7 1296 aa12.02□□□□□ -0.49
CDKL3-203ENST00000519312 COL16A1Q07092 1604 aaPredicted RBP12.01□□□□□ -0.49
CDKL3-203ENST00000519312 LARP6Q9BRS8 491 aaKnown RBP12.01□□□□□ -0.49
CDKL3-203ENST00000519312 CHD2O14647 1828 aaKnown RBP12.01□□□□□ -0.49
CDKL3-203ENST00000519312 JCADQ9P266 1359 aa12.01□□□□□ -0.49
CDKL3-203ENST00000519312 PROSER2Q86WR7 435 aaPredicted RBP12□□□□□ -0.49
CDKL3-203ENST00000519312 UPF1Q92900 1129 aaKnown RBP eCLIP12□□□□□ -0.49
CDKL3-203ENST00000519312 SLC26A8Q96RN1 970 aa12□□□□□ -0.49
CDKL3-203ENST00000519312 DIP2AQ14689 1571 aa12□□□□□ -0.49
CDKL3-203ENST00000519312 TMEM131LA2VDJ0 1609 aa12□□□□□ -0.49
CDKL3-203ENST00000519312 PHLPP1O60346 1717 aa12□□□□□ -0.49
CDKL3-203ENST00000519312 AHDC1Q5TGY3 1603 aaPredicted RBP11.99□□□□□ -0.49
CDKL3-203ENST00000519312 PIK3R4Q99570 1358 aa11.98□□□□□ -0.49
CDKL3-203ENST00000519312 GCC2Q8IWJ2 1684 aa11.97□□□□□ -0.49
CDKL3-203ENST00000519312 UNC13BO14795 1591 aa11.97□□□□□ -0.49
CDKL3-203ENST00000519312 ANKRD50Q9ULJ7 1429 aa11.97□□□□□ -0.49
CDKL3-203ENST00000519312 RIMS2Q9UQ26 1411 aa11.97□□□□□ -0.49
CDKL3-203ENST00000519312 OXER1Q8TDS5 423 aa11.97□□□□□ -0.49
CDKL3-203ENST00000519312 SLAIN2Q9P270 581 aa11.97□□□□□ -0.49
CDKL3-203ENST00000519312 SPATA31A6Q5VVP1 1343 aa11.96□□□□□ -0.49
CDKL3-203ENST00000519312 TBC1D12O60347 775 aa11.96□□□□□ -0.49
CDKL3-203ENST00000519312 DDX27Q96GQ7 796 aaKnown RBP11.96□□□□□ -0.49
CDKL3-203ENST00000519312 TBX22Q9Y458 520 aa11.96□□□□□ -0.49
CDKL3-203ENST00000519312 SHPRHQ149N8 1683 aa11.96□□□□□ -0.5
CDKL3-203ENST00000519312 ADAMTS13Q76LX8 1427 aa11.95□□□□□ -0.5
CDKL3-203ENST00000519312 HDGFP51858 240 aaKnown RBP11.95□□□□□ -0.5
CDKL3-203ENST00000519312 LRP6O75581 1613 aa11.95□□□□□ -0.5
CDKL3-203ENST00000519312 SETD1AO15047 1707 aaKnown RBP11.94□□□□□ -0.5
CDKL3-203ENST00000519312 LOC105371045A0A1W2PR82 267 aa11.94□□□□□ -0.5
CDKL3-203ENST00000519312 MFSD10Q14728 455 aa11.94□□□□□ -0.5
CDKL3-203ENST00000519312 MYO5BQ9ULV0 1848 aa11.94□□□□□ -0.5
CDKL3-203ENST00000519312 DCCP43146 1447 aa11.94□□□□□ -0.5
CDKL3-203ENST00000519312 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDKL3-203ENST00000519312 RBM33Q96EV2 1170 aaKnown RBP11.93□□□□□ -0.5
CDKL3-203ENST00000519312 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.93□□□□□ -0.5
CDKL3-203ENST00000519312 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.92□□□□□ -0.5
CDKL3-203ENST00000519312 CDK12Q9NYV4 1490 aaPredicted RBP11.92□□□□□ -0.5
CDKL3-203ENST00000519312 POTEEQ6S8J3 1075 aa11.92□□□□□ -0.5
CDKL3-203ENST00000519312 SPRYD3Q8NCJ5 442 aa11.92□□□□□ -0.5
CDKL3-203ENST00000519312 CHIC2Q9UKJ5 165 aa11.92□□□□□ -0.5
CDKL3-203ENST00000519312 AXIN2Q9Y2T1 843 aa11.92□□□□□ -0.5
CDKL3-203ENST00000519312 IQGAP3Q86VI3 1631 aa11.92□□□□□ -0.5
CDKL3-203ENST00000519312 TRPM2O94759 1503 aa11.91□□□□□ -0.5
CDKL3-203ENST00000519312 E9PCH4 1651 aa11.91□□□□□ -0.5
CDKL3-203ENST00000519312 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
CDKL3-203ENST00000519312 C19orf44Q9H6X5 657 aa11.9□□□□□ -0.5
CDKL3-203ENST00000519312 ROCK1Q13464 1354 aa11.9□□□□□ -0.5
CDKL3-203ENST00000519312 XRN1Q8IZH2 1706 aaKnown RBP11.89□□□□□ -0.51
CDKL3-203ENST00000519312 SETBP1Q9Y6X0 1596 aa11.89□□□□□ -0.51
CDKL3-203ENST00000519312 PSDA5PKW4 1024 aaPredicted RBP11.89□□□□□ -0.51
CDKL3-203ENST00000519312 PPP1R15AO75807 674 aaPredicted RBP11.89□□□□□ -0.51
CDKL3-203ENST00000519312 ZNF772Q68DY9 489 aaPredicted RBP11.89□□□□□ -0.51
CDKL3-203ENST00000519312 SETD5Q9C0A6 1442 aa11.88□□□□□ -0.51
CDKL3-203ENST00000519312 LSM11P83369 360 aaKnown RBP eCLIP11.88□□□□□ -0.51
CDKL3-203ENST00000519312 BCANQ96GW7 911 aa11.88□□□□□ -0.51
CDKL3-203ENST00000519312 ASXL1Q8IXJ9 1541 aa11.87□□□□□ -0.51
CDKL3-203ENST00000519312 NHSL1Q5SYE7 1610 aa11.87□□□□□ -0.51
CDKL3-203ENST00000519312 NRXN3Q9Y4C0 1643 aa11.87□□□□□ -0.51
CDKL3-203ENST00000519312 PBX2P40425 430 aa11.87□□□□□ -0.51
CDKL3-203ENST00000519312 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
CDKL3-203ENST00000519312 CFAP44Q96MT7 982 aa11.87□□□□□ -0.51
CDKL3-203ENST00000519312 PTPRUQ92729 1446 aa11.86□□□□□ -0.51
CDKL3-203ENST00000519312 EMILIN3Q9NT22 766 aa11.86□□□□□ -0.51
CDKL3-203ENST00000519312 ATF3P18847 181 aa11.85□□□□□ -0.51
CDKL3-203ENST00000519312 PPP4R3BQ5MIZ7 849 aa11.85□□□□□ -0.51
CDKL3-203ENST00000519312 BRINP3Q76B58 766 aa11.85□□□□□ -0.51
CDKL3-203ENST00000519312 MST1RQ04912 1400 aa11.85□□□□□ -0.51
CDKL3-203ENST00000519312 LAMC1P11047 1609 aa11.83□□□□□ -0.52
CDKL3-203ENST00000519312 ARHGAP33O14559 1287 aa11.82□□□□□ -0.52
CDKL3-203ENST00000519312 EVI5O60447 810 aa11.82□□□□□ -0.52
CDKL3-203ENST00000519312 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
CDKL3-203ENST00000519312 MEX3CQ5U5Q3 659 aaKnown RBP11.82□□□□□ -0.52
CDKL3-203ENST00000519312 C14orf37Q86TY3 774 aa11.82□□□□□ -0.52
CDKL3-203ENST00000519312 AMOTL2Q9Y2J4 779 aa11.82□□□□□ -0.52
CDKL3-203ENST00000519312 PRAG1Q86YV5 1406 aa11.82□□□□□ -0.52
CDKL3-203ENST00000519312 ADGRL3Q9HAR2 1447 aa11.81□□□□□ -0.52
CDKL3-203ENST00000519312 RXRBP28702 533 aa11.81□□□□□ -0.52
CDKL3-203ENST00000519312 PSEN2P49810 448 aa11.81□□□□□ -0.52
CDKL3-203ENST00000519312 MAP3K9P80192 1104 aa11.81□□□□□ -0.52
CDKL3-203ENST00000519312 ZNF454Q8N9F8 522 aa11.81□□□□□ -0.52
CDKL3-203ENST00000519312 SPHKAPQ2M3C7 1700 aa11.8□□□□□ -0.52
CDKL3-203ENST00000519312 RNF166Q96A37 237 aaPredicted RBP11.79□□□□□ -0.52
CDKL3-203ENST00000519312 NEXMIFQ5QGS0 1516 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms