RNA–Protein interactions for RNA: ENST00000519060.6

MSR1-210, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5

Gene MSR1, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-210ENST00000519060 PTPRUQ92729 1446 aa14.29□□□□□ -0.12
MSR1-210ENST00000519060 GCC2Q8IWJ2 1684 aa14.27□□□□□ -0.12
MSR1-210ENST00000519060 NUTM2BA6NNL0 878 aaPredicted RBP14.27□□□□□ -0.13
MSR1-210ENST00000519060 NUTM2EB1AL46 878 aaPredicted RBP14.27□□□□□ -0.13
MSR1-210ENST00000519060 NUTM2AQ8IVF1 878 aaPredicted RBP14.27□□□□□ -0.13
MSR1-210ENST00000519060 UPF1Q92900 1129 aaKnown RBP eCLIP14.27□□□□□ -0.13
MSR1-210ENST00000519060 TRIM52Q96A61 297 aa14.27□□□□□ -0.13
MSR1-210ENST00000519060 LRP6O75581 1613 aa14.26□□□□□ -0.13
MSR1-210ENST00000519060 POTEJP0CG39 1038 aa14.26□□□□□ -0.13
MSR1-210ENST00000519060 PPARGC1BQ86YN6 1023 aaKnown RBP14.26□□□□□ -0.13
MSR1-210ENST00000519060 COL16A1Q07092 1604 aaPredicted RBP14.26□□□□□ -0.13
MSR1-210ENST00000519060 RXRBP28702 533 aa14.25□□□□□ -0.13
MSR1-210ENST00000519060 ZNF326Q5BKZ1 582 aaKnown RBP14.25□□□□□ -0.13
MSR1-210ENST00000519060 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.24□□□□□ -0.13
MSR1-210ENST00000519060 E9PCH4 1651 aa14.24□□□□□ -0.13
MSR1-210ENST00000519060 UNC13BO14795 1591 aa14.24□□□□□ -0.13
MSR1-210ENST00000519060 TSHZ2Q9NRE2 1034 aa14.23□□□□□ -0.13
MSR1-210ENST00000519060 METP08581 1390 aa14.22□□□□□ -0.13
MSR1-210ENST00000519060 HAP1P54257 671 aaPredicted RBP14.22□□□□□ -0.13
MSR1-210ENST00000519060 LHX8Q68G74 356 aa14.22□□□□□ -0.13
MSR1-210ENST00000519060 DDX17Q92841 729 aaKnown RBP14.22□□□□□ -0.13
MSR1-210ENST00000519060 LRRC59Q96AG4 307 aaKnown RBP14.22□□□□□ -0.13
MSR1-210ENST00000519060 AHDC1Q5TGY3 1603 aaPredicted RBP14.21□□□□□ -0.13
MSR1-210ENST00000519060 DIP2AQ14689 1571 aa14.21□□□□□ -0.14
MSR1-210ENST00000519060 AFF2P51816 1311 aa14.2□□□□□ -0.14
MSR1-210ENST00000519060 TRPM2O94759 1503 aa14.2□□□□□ -0.14
MSR1-210ENST00000519060 IQGAP3Q86VI3 1631 aa14.19□□□□□ -0.14
MSR1-210ENST00000519060 SETD1AO15047 1707 aaKnown RBP14.19□□□□□ -0.14
MSR1-210ENST00000519060 MAMSTRQ6ZN01 415 aa14.19□□□□□ -0.14
MSR1-210ENST00000519060 C3orf67Q6ZVT6 689 aa14.19□□□□□ -0.14
MSR1-210ENST00000519060 QTRT2Q9H974 415 aaKnown RBP14.19□□□□□ -0.14
MSR1-210ENST00000519060 DCCP43146 1447 aa14.18□□□□□ -0.14
MSR1-210ENST00000519060 MST1RQ04912 1400 aa14.18□□□□□ -0.14
MSR1-210ENST00000519060 SETD5Q9C0A6 1442 aa14.18□□□□□ -0.14
MSR1-210ENST00000519060 C8orf37Q96NL8 207 aa14.17□□□□□ -0.14
MSR1-210ENST00000519060 SCUBE2Q9NQ36 999 aa14.16□□□□□ -0.14
MSR1-210ENST00000519060 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.16□□□□□ -0.14
MSR1-210ENST00000519060 SHPRHQ149N8 1683 aa14.15□□□□□ -0.14
MSR1-210ENST00000519060 ASXL1Q8IXJ9 1541 aa14.15□□□□□ -0.14
MSR1-210ENST00000519060 SETBP1Q9Y6X0 1596 aa14.14□□□□□ -0.15
MSR1-210ENST00000519060 RBM6P78332 1123 aaKnown RBP14.14□□□□□ -0.15
MSR1-210ENST00000519060 NGLY1Q96IV0 654 aa14.14□□□□□ -0.15
MSR1-210ENST00000519060 ORAI2Q96SN7 254 aa14.14□□□□□ -0.15
MSR1-210ENST00000519060 NRXN3Q9Y4C0 1643 aa14.14□□□□□ -0.15
MSR1-210ENST00000519060 PNPLA6Q8IY17 1366 aa14.13□□□□□ -0.15
MSR1-210ENST00000519060 ADAMTS2O95450 1211 aa14.13□□□□□ -0.15
MSR1-210ENST00000519060 ADGRL3Q9HAR2 1447 aa14.12□□□□□ -0.15
MSR1-210ENST00000519060 XRN1Q8IZH2 1706 aaKnown RBP14.12□□□□□ -0.15
MSR1-210ENST00000519060 CDK12Q9NYV4 1490 aaPredicted RBP14.12□□□□□ -0.15
MSR1-210ENST00000519060 TMEM92Q6UXU6 159 aa14.1□□□□□ -0.15
MSR1-210ENST00000519060 C1orf167Q5SNV9 1468 aa14.1□□□□□ -0.15
MSR1-210ENST00000519060 SOS2Q07890 1332 aaPredicted RBP14.1□□□□□ -0.15
MSR1-210ENST00000519060 ROBO2Q9HCK4 1378 aa14.09□□□□□ -0.15
MSR1-210ENST00000519060 PDE4AP27815 886 aa14.09□□□□□ -0.15
MSR1-210ENST00000519060 OTUD5Q96G74 571 aa14.09□□□□□ -0.15
MSR1-210ENST00000519060 CRISPLD2Q9H0B8 497 aa14.08□□□□□ -0.16
MSR1-210ENST00000519060 NEXMIFQ5QGS0 1516 aa14.08□□□□□ -0.16
MSR1-210ENST00000519060 RPGRIP1LQ68CZ1 1315 aa14.08□□□□□ -0.16
MSR1-210ENST00000519060 SPHKAPQ2M3C7 1700 aa14.07□□□□□ -0.16
MSR1-210ENST00000519060 FNBP4Q8N3X1 1017 aaPredicted RBP14.07□□□□□ -0.16
MSR1-210ENST00000519060 TMC2Q8TDI7 906 aa14.07□□□□□ -0.16
MSR1-210ENST00000519060 GPHNQ9NQX3 736 aaPredicted RBP14.07□□□□□ -0.16
MSR1-210ENST00000519060 USP21Q9UK80 565 aa14.07□□□□□ -0.16
MSR1-210ENST00000519060 NHSL1Q5SYE7 1610 aa14.07□□□□□ -0.16
MSR1-210ENST00000519060 NAIPQ13075 1403 aa14.07□□□□□ -0.16
MSR1-210ENST00000519060 CLTCL1P53675 1640 aa14.06□□□□□ -0.16
MSR1-210ENST00000519060 KIF3CO14782 793 aa14.06□□□□□ -0.16
MSR1-210ENST00000519060 RGS12O14924 1447 aa14.06□□□□□ -0.16
MSR1-210ENST00000519060 C2orf72A6NCS6 295 aa14.05□□□□□ -0.16
MSR1-210ENST00000519060 SLAIN1Q8ND83 568 aa14.05□□□□□ -0.16
MSR1-210ENST00000519060 ESCO1Q5FWF5 840 aa14.04□□□□□ -0.16
MSR1-210ENST00000519060 TRPC5Q9UL62 973 aaPredicted RBP14.04□□□□□ -0.16
MSR1-210ENST00000519060 FOXO3O43524 673 aa14.03□□□□□ -0.16
MSR1-210ENST00000519060 SLC24A1O60721 1099 aa14.03□□□□□ -0.16
MSR1-210ENST00000519060 VSIG10Q8N0Z9 540 aa14.03□□□□□ -0.16
MSR1-210ENST00000519060 LARP6Q9BRS8 491 aaKnown RBP14.03□□□□□ -0.16
MSR1-210ENST00000519060 PTCH1Q13635 1447 aa14.03□□□□□ -0.16
MSR1-210ENST00000519060 RRBP1Q9P2E9 1410 aaKnown RBP14.02□□□□□ -0.16
MSR1-210ENST00000519060 WAPLQ7Z5K2 1190 aa14.02□□□□□ -0.17
MSR1-210ENST00000519060 NALCNQ8IZF0 1738 aa14.01□□□□□ -0.17
MSR1-210ENST00000519060 ADGRF5Q8IZF2 1346 aa14.01□□□□□ -0.17
MSR1-210ENST00000519060 XPCQ01831 940 aaPredicted RBP14.01□□□□□ -0.17
MSR1-210ENST00000519060 RGL3Q3MIN7 710 aa14.01□□□□□ -0.17
MSR1-210ENST00000519060 STK26Q9P289 416 aa14.01□□□□□ -0.17
MSR1-210ENST00000519060 HFM1A2PYH4 1435 aa14□□□□□ -0.17
MSR1-210ENST00000519060 NUTM2FA1L443 756 aa14□□□□□ -0.17
MSR1-210ENST00000519060 KIF1BO60333 1816 aa13.99□□□□□ -0.17
MSR1-210ENST00000519060 NPHP3Q7Z494 1330 aa13.99□□□□□ -0.17
MSR1-210ENST00000519060 MFSD10Q14728 455 aa13.99□□□□□ -0.17
MSR1-210ENST00000519060 TMEM132EQ6IEE7 984 aa13.99□□□□□ -0.17
MSR1-210ENST00000519060 PRAG1Q86YV5 1406 aa13.98□□□□□ -0.17
MSR1-210ENST00000519060 ATAD2Q6PL18 1390 aa13.98□□□□□ -0.17
MSR1-210ENST00000519060 FOXK1P85037 733 aa13.98□□□□□ -0.17
MSR1-210ENST00000519060 KDM2AQ9Y2K7 1162 aa13.98□□□□□ -0.17
MSR1-210ENST00000519060 LAMC1P11047 1609 aa13.97□□□□□ -0.17
MSR1-210ENST00000519060 DDX27Q96GQ7 796 aaKnown RBP13.97□□□□□ -0.17
MSR1-210ENST00000519060 GJD4Q96KN9 370 aaPredicted RBP13.97□□□□□ -0.17
MSR1-210ENST00000519060 WDR70Q9NW82 654 aa13.97□□□□□ -0.17
MSR1-210ENST00000519060 ATRNO75882 1429 aa13.97□□□□□ -0.17
MSR1-210ENST00000519060 BCL9LQ86UU0 1499 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms