RNA–Protein interactions for RNA: ENST00000518869.1

TMEM55A-203, humanhuman

TSL 5

Gene TMEM55A, Length 841 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-203ENST00000518869 TRPM1Q7Z4N2 1603 aa18.75■□□□□ 0.59
TMEM55A-203ENST00000518869 ABTB2Q8N961 1025 aa18.75■□□□□ 0.59
TMEM55A-203ENST00000518869 CCDC9Q9Y3X0 531 aaKnown RBP18.75■□□□□ 0.59
TMEM55A-203ENST00000518869 SLIT2O94813 1529 aa18.74■□□□□ 0.59
TMEM55A-203ENST00000518869 FAM83GA6ND36 823 aa18.74■□□□□ 0.59
TMEM55A-203ENST00000518869 VPS72Q15906 364 aa18.74■□□□□ 0.59
TMEM55A-203ENST00000518869 NLRP13Q86W25 1043 aa18.74■□□□□ 0.59
TMEM55A-203ENST00000518869 CABP1Q9NZU7 370 aa18.74■□□□□ 0.59
TMEM55A-203ENST00000518869 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
TMEM55A-203ENST00000518869 UPF1Q92900 1129 aaKnown RBP eCLIP18.73■□□□□ 0.59
TMEM55A-203ENST00000518869 PRDM11Q9NQV5 511 aa18.73■□□□□ 0.59
TMEM55A-203ENST00000518869 TIMELESSQ9UNS1 1208 aa18.73■□□□□ 0.59
TMEM55A-203ENST00000518869 CLSPNQ9HAW4 1339 aa18.73■□□□□ 0.59
TMEM55A-203ENST00000518869 ATAD2Q6PL18 1390 aa18.72■□□□□ 0.59
TMEM55A-203ENST00000518869 RGS12O14924 1447 aa18.72■□□□□ 0.59
TMEM55A-203ENST00000518869 BTG4Q9NY30 223 aa18.71■□□□□ 0.59
TMEM55A-203ENST00000518869 QRICH2Q9H0J4 1663 aa18.7■□□□□ 0.58
TMEM55A-203ENST00000518869 TRPM3Q9HCF6 1732 aaPredicted RBP18.7■□□□□ 0.58
TMEM55A-203ENST00000518869 SBNO2Q9Y2G9 1366 aa18.69■□□□□ 0.58
TMEM55A-203ENST00000518869 CCDC125Q86Z20 511 aa18.69■□□□□ 0.58
TMEM55A-203ENST00000518869 PCGF6Q9BYE7 350 aa18.68■□□□□ 0.58
TMEM55A-203ENST00000518869 RALGAPBQ86X10 1494 aa18.68■□□□□ 0.58
TMEM55A-203ENST00000518869 ALS2Q96Q42 1657 aa18.68■□□□□ 0.58
TMEM55A-203ENST00000518869 NUTM2GQ5VZR2 741 aa18.67■□□□□ 0.58
TMEM55A-203ENST00000518869 PUS7Q96PZ0 661 aaKnown RBP18.67■□□□□ 0.58
TMEM55A-203ENST00000518869 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.66■□□□□ 0.58
TMEM55A-203ENST00000518869 EVA1CP58658 441 aa18.66■□□□□ 0.58
TMEM55A-203ENST00000518869 TOPAZ1Q8N9V7 1692 aa18.66■□□□□ 0.58
TMEM55A-203ENST00000518869 ONECUT3O60422 494 aaPredicted RBP18.65■□□□□ 0.58
TMEM55A-203ENST00000518869 NLRP6P59044 892 aa18.65■□□□□ 0.58
TMEM55A-203ENST00000518869 NWD2Q9ULI1 1742 aa18.65■□□□□ 0.58
TMEM55A-203ENST00000518869 A0A0G2JS52 829 aa18.64■□□□□ 0.57
TMEM55A-203ENST00000518869 ZC3H6P61129 1189 aaKnown RBP18.64■□□□□ 0.57
TMEM55A-203ENST00000518869 MYT1Q01538 1121 aa18.64■□□□□ 0.57
TMEM55A-203ENST00000518869 SEPT12Q8IYM1 358 aa18.64■□□□□ 0.57
TMEM55A-203ENST00000518869 USP6P35125 1406 aa18.64■□□□□ 0.57
TMEM55A-203ENST00000518869 GCP02774 474 aa18.63■□□□□ 0.57
TMEM55A-203ENST00000518869 TTC21AQ8NDW8 1320 aa18.63■□□□□ 0.57
TMEM55A-203ENST00000518869 KIAA0232Q92628 1395 aa18.63■□□□□ 0.57
TMEM55A-203ENST00000518869 COL14A1Q05707 1796 aaKnown RBP18.63■□□□□ 0.57
TMEM55A-203ENST00000518869 HDGFL2Q7Z4V5 671 aaPredicted RBP18.62■□□□□ 0.57
TMEM55A-203ENST00000518869 KCNH5Q8NCM2 988 aa18.62■□□□□ 0.57
TMEM55A-203ENST00000518869 TMC1Q8TDI8 760 aa18.62■□□□□ 0.57
TMEM55A-203ENST00000518869 TERF2IPQ9NYB0 399 aa18.62■□□□□ 0.57
TMEM55A-203ENST00000518869 USP19O94966 1318 aa18.61■□□□□ 0.57
TMEM55A-203ENST00000518869 ABCA3Q99758 1704 aa18.6■□□□□ 0.57
TMEM55A-203ENST00000518869 CPDO75976 1380 aa18.6■□□□□ 0.57
TMEM55A-203ENST00000518869 SF3B2Q13435 895 aaKnown RBP18.6■□□□□ 0.57
TMEM55A-203ENST00000518869 KTN1Q86UP2 1357 aaKnown RBP18.59■□□□□ 0.57
TMEM55A-203ENST00000518869 SPATA31A5Q5VU36 1347 aa18.59■□□□□ 0.57
TMEM55A-203ENST00000518869 TTC21BQ7Z4L5 1316 aa18.59■□□□□ 0.57
TMEM55A-203ENST00000518869 SPATA31A7Q8IWB4 1347 aa18.59■□□□□ 0.57
TMEM55A-203ENST00000518869 CHRNA2Q15822 529 aa18.59■□□□□ 0.57
TMEM55A-203ENST00000518869 CDCA8Q53HL2 280 aa18.59■□□□□ 0.57
TMEM55A-203ENST00000518869 KRT27Q7Z3Y8 459 aa18.59■□□□□ 0.57
TMEM55A-203ENST00000518869 STRN4Q9NRL3 753 aa18.59■□□□□ 0.57
TMEM55A-203ENST00000518869 PLCH1Q4KWH8 1693 aa18.58■□□□□ 0.57
TMEM55A-203ENST00000518869 ST20-MTHFSA0A0A6YYL1 179 aa18.58■□□□□ 0.56
TMEM55A-203ENST00000518869 FAM98CQ17RN3 349 aaKnown RBP18.58■□□□□ 0.56
TMEM55A-203ENST00000518869 CCER1Q8TC90 406 aaPredicted RBP18.57■□□□□ 0.56
TMEM55A-203ENST00000518869 NINLQ9Y2I6 1382 aa18.56■□□□□ 0.56
TMEM55A-203ENST00000518869 GLI3P10071 1580 aa18.56■□□□□ 0.56
TMEM55A-203ENST00000518869 TMF1P82094 1093 aa18.56■□□□□ 0.56
TMEM55A-203ENST00000518869 CPSF1Q10570 1443 aaKnown RBP18.56■□□□□ 0.56
TMEM55A-203ENST00000518869 SSH2Q76I76 1423 aa18.56■□□□□ 0.56
TMEM55A-203ENST00000518869 SPATA31A1Q5TZJ5 1347 aa18.54■□□□□ 0.56
TMEM55A-203ENST00000518869 THRAP3Q9Y2W1 955 aaKnown RBP18.54■□□□□ 0.56
TMEM55A-203ENST00000518869 ZBTB7CA1YPR0 619 aa18.53■□□□□ 0.56
TMEM55A-203ENST00000518869 SLC12A5Q9H2X9 1139 aa18.53■□□□□ 0.56
TMEM55A-203ENST00000518869 CRYBG1Q9Y4K1 1723 aa18.52■□□□□ 0.56
TMEM55A-203ENST00000518869 BARGINQ6ZT62 677 aa18.52■□□□□ 0.56
TMEM55A-203ENST00000518869 TCP11L2Q8N4U5 519 aa18.52■□□□□ 0.56
TMEM55A-203ENST00000518869 TESK2Q96S53 571 aa18.52■□□□□ 0.56
TMEM55A-203ENST00000518869 AATKQ6ZMQ8 1374 aa18.52■□□□□ 0.55
TMEM55A-203ENST00000518869 PHRF1Q9P1Y6 1649 aaKnown RBP18.52■□□□□ 0.55
TMEM55A-203ENST00000518869 BLMP54132 1417 aaPredicted RBP18.51■□□□□ 0.55
TMEM55A-203ENST00000518869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.51■□□□□ 0.55
TMEM55A-203ENST00000518869 USP35Q9P2H5 1018 aa18.51■□□□□ 0.55
TMEM55A-203ENST00000518869 USP47Q96K76 1375 aa18.51■□□□□ 0.55
TMEM55A-203ENST00000518869 PDE3BQ13370 1112 aa18.5■□□□□ 0.55
TMEM55A-203ENST00000518869 NRAPQ86VF7 1730 aa18.49■□□□□ 0.55
TMEM55A-203ENST00000518869 C11orf95C9JLR9 678 aaPredicted RBP18.49■□□□□ 0.55
TMEM55A-203ENST00000518869 LARP1Q6PKG0 1096 aaKnown RBP18.49■□□□□ 0.55
TMEM55A-203ENST00000518869 NRKQ7Z2Y5 1582 aa18.49■□□□□ 0.55
TMEM55A-203ENST00000518869 ARHGEF25Q86VW2 580 aa18.48■□□□□ 0.55
TMEM55A-203ENST00000518869 EDC4Q6P2E9 1401 aaKnown RBP18.48■□□□□ 0.55
TMEM55A-203ENST00000518869 USP31Q70CQ4 1352 aa18.47■□□□□ 0.55
TMEM55A-203ENST00000518869 FAM196AQ6ZSG2 479 aa18.47■□□□□ 0.55
TMEM55A-203ENST00000518869 TOM1L2Q6ZVM7 507 aa18.47■□□□□ 0.55
TMEM55A-203ENST00000518869 ZRANB1Q9UGI0 708 aa18.47■□□□□ 0.55
TMEM55A-203ENST00000518869 SLIT3O75094 1523 aa18.47■□□□□ 0.55
TMEM55A-203ENST00000518869 SOX12O15370 315 aa18.46■□□□□ 0.55
TMEM55A-203ENST00000518869 CSB-PGBD3P0DP91 1061 aa18.46■□□□□ 0.55
TMEM55A-203ENST00000518869 CDCA7Q9BWT1 371 aaPredicted RBP18.46■□□□□ 0.55
TMEM55A-203ENST00000518869 CAMTA1Q9Y6Y1 1673 aa18.46■□□□□ 0.55
TMEM55A-203ENST00000518869 AKAP12Q02952 1782 aa18.45■□□□□ 0.54
TMEM55A-203ENST00000518869 BAG6P46379 1132 aa18.45■□□□□ 0.54
TMEM55A-203ENST00000518869 CRB1P82279 1406 aa18.44■□□□□ 0.54
TMEM55A-203ENST00000518869 NME9Q86XW9 330 aa18.44■□□□□ 0.54
TMEM55A-203ENST00000518869 COL5A2P05997 1499 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms