RNA–Protein interactions for RNA: ENST00000518680.1

MCM4-205, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 5

Gene MCM4, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-205ENST00000518680 UPF1Q92900 1129 aaKnown RBP eCLIP16.82■□□□□ 0.28
MCM4-205ENST00000518680 NWD2Q9ULI1 1742 aa16.82■□□□□ 0.28
MCM4-205ENST00000518680 PLCH1Q4KWH8 1693 aa16.81■□□□□ 0.28
MCM4-205ENST00000518680 POLR3AO14802 1390 aaPredicted RBP16.8■□□□□ 0.28
MCM4-205ENST00000518680 GJD4Q96KN9 370 aaPredicted RBP16.8■□□□□ 0.28
MCM4-205ENST00000518680 TONSLQ96HA7 1378 aa16.79■□□□□ 0.28
MCM4-205ENST00000518680 ACEP12821 1306 aa16.79■□□□□ 0.28
MCM4-205ENST00000518680 PLEKHG3A1L390 1219 aa16.79■□□□□ 0.28
MCM4-205ENST00000518680 NBPF8Q3BBV2 869 aa16.78■□□□□ 0.28
MCM4-205ENST00000518680 CRYBG1Q9Y4K1 1723 aa16.78■□□□□ 0.28
MCM4-205ENST00000518680 CABP2Q9NPB3 220 aa16.77■□□□□ 0.28
MCM4-205ENST00000518680 RALGAPBQ86X10 1494 aa16.77■□□□□ 0.28
MCM4-205ENST00000518680 PPIP5K1Q6PFW1 1433 aa16.77■□□□□ 0.27
MCM4-205ENST00000518680 COL14A1Q05707 1796 aaKnown RBP16.77■□□□□ 0.27
MCM4-205ENST00000518680 ATAD2Q6PL18 1390 aa16.77■□□□□ 0.27
MCM4-205ENST00000518680 EVC2Q86UK5 1308 aa16.76■□□□□ 0.27
MCM4-205ENST00000518680 FAM83GA6ND36 823 aa16.76■□□□□ 0.27
MCM4-205ENST00000518680 GLI3P10071 1580 aa16.76■□□□□ 0.27
MCM4-205ENST00000518680 VPS72Q15906 364 aa16.75■□□□□ 0.27
MCM4-205ENST00000518680 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
MCM4-205ENST00000518680 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
MCM4-205ENST00000518680 NRAPQ86VF7 1730 aa16.73■□□□□ 0.27
MCM4-205ENST00000518680 NUTM2GQ5VZR2 741 aa16.72■□□□□ 0.27
MCM4-205ENST00000518680 CARD11Q9BXL7 1154 aa16.72■□□□□ 0.27
MCM4-205ENST00000518680 PRDM11Q9NQV5 511 aa16.72■□□□□ 0.27
MCM4-205ENST00000518680 BTG4Q9NY30 223 aa16.72■□□□□ 0.27
MCM4-205ENST00000518680 BRD4O60885 1362 aaPredicted RBP16.72■□□□□ 0.27
MCM4-205ENST00000518680 ABTB2Q8N961 1025 aa16.71■□□□□ 0.27
MCM4-205ENST00000518680 CABP1Q9NZU7 370 aa16.71■□□□□ 0.27
MCM4-205ENST00000518680 KIAA0232Q92628 1395 aa16.69■□□□□ 0.26
MCM4-205ENST00000518680 BRWD3Q6RI45 1802 aa16.69■□□□□ 0.26
MCM4-205ENST00000518680 USP6P35125 1406 aa16.69■□□□□ 0.26
MCM4-205ENST00000518680 SBNO2Q9Y2G9 1366 aa16.68■□□□□ 0.26
MCM4-205ENST00000518680 NLRP13Q86W25 1043 aa16.68■□□□□ 0.26
MCM4-205ENST00000518680 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
MCM4-205ENST00000518680 NRKQ7Z2Y5 1582 aa16.68■□□□□ 0.26
MCM4-205ENST00000518680 ZC3H6P61129 1189 aaKnown RBP16.67■□□□□ 0.26
MCM4-205ENST00000518680 USP19O94966 1318 aa16.67■□□□□ 0.26
MCM4-205ENST00000518680 A0A0G2JS52 829 aa16.66■□□□□ 0.26
MCM4-205ENST00000518680 ONECUT3O60422 494 aaPredicted RBP16.66■□□□□ 0.26
MCM4-205ENST00000518680 MYT1Q01538 1121 aa16.66■□□□□ 0.26
MCM4-205ENST00000518680 CHRNA2Q15822 529 aa16.66■□□□□ 0.26
MCM4-205ENST00000518680 AKAP12Q02952 1782 aa16.66■□□□□ 0.26
MCM4-205ENST00000518680 CCDC125Q86Z20 511 aa16.64■□□□□ 0.25
MCM4-205ENST00000518680 ZNF692Q9BU19 519 aaPredicted RBP16.64■□□□□ 0.25
MCM4-205ENST00000518680 SPATA31A5Q5VU36 1347 aa16.64■□□□□ 0.25
MCM4-205ENST00000518680 SPATA31A7Q8IWB4 1347 aa16.64■□□□□ 0.25
MCM4-205ENST00000518680 CPDO75976 1380 aa16.64■□□□□ 0.25
MCM4-205ENST00000518680 EP400Q96L91 3159 aa16.63■□□□□ 0.25
MCM4-205ENST00000518680 NLRP6P59044 892 aa16.63■□□□□ 0.25
MCM4-205ENST00000518680 FAM98CQ17RN3 349 aaKnown RBP16.63■□□□□ 0.25
MCM4-205ENST00000518680 SSH2Q76I76 1423 aa16.62■□□□□ 0.25
MCM4-205ENST00000518680 GCP02774 474 aa16.62■□□□□ 0.25
MCM4-205ENST00000518680 KRT27Q7Z3Y8 459 aa16.62■□□□□ 0.25
MCM4-205ENST00000518680 STRN4Q9NRL3 753 aa16.62■□□□□ 0.25
MCM4-205ENST00000518680 PIK3C2AO00443 1686 aa16.62■□□□□ 0.25
MCM4-205ENST00000518680 EVA1CP58658 441 aa16.61■□□□□ 0.25
MCM4-205ENST00000518680 LMO7Q8WWI1 1683 aa16.6■□□□□ 0.25
MCM4-205ENST00000518680 TTC21BQ7Z4L5 1316 aa16.6■□□□□ 0.25
MCM4-205ENST00000518680 KTN1Q86UP2 1357 aaKnown RBP16.6■□□□□ 0.25
MCM4-205ENST00000518680 CPSF1Q10570 1443 aaKnown RBP16.6■□□□□ 0.25
MCM4-205ENST00000518680 SLIT3O75094 1523 aa16.6■□□□□ 0.25
MCM4-205ENST00000518680 MON2Q7Z3U7 1717 aa16.59■□□□□ 0.25
MCM4-205ENST00000518680 SPATA31A1Q5TZJ5 1347 aa16.59■□□□□ 0.25
MCM4-205ENST00000518680 TTC21AQ8NDW8 1320 aa16.59■□□□□ 0.25
MCM4-205ENST00000518680 BLMP54132 1417 aaPredicted RBP16.59■□□□□ 0.25
MCM4-205ENST00000518680 THSD7AQ9UPZ6 1657 aa16.59■□□□□ 0.25
MCM4-205ENST00000518680 CAMTA1Q9Y6Y1 1673 aa16.59■□□□□ 0.25
MCM4-205ENST00000518680 ZBTB7CA1YPR0 619 aa16.57■□□□□ 0.24
MCM4-205ENST00000518680 SF3B2Q13435 895 aaKnown RBP16.57■□□□□ 0.24
MCM4-205ENST00000518680 TMC1Q8TDI8 760 aa16.57■□□□□ 0.24
MCM4-205ENST00000518680 PCGF6Q9BYE7 350 aa16.57■□□□□ 0.24
MCM4-205ENST00000518680 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
MCM4-205ENST00000518680 ST20-MTHFSA0A0A6YYL1 179 aa16.56■□□□□ 0.24
MCM4-205ENST00000518680 SLC24A1O60721 1099 aa16.56■□□□□ 0.24
MCM4-205ENST00000518680 PUS7Q96PZ0 661 aaKnown RBP16.56■□□□□ 0.24
MCM4-205ENST00000518680 HDGFL2Q7Z4V5 671 aaPredicted RBP16.55■□□□□ 0.24
MCM4-205ENST00000518680 KCNH5Q8NCM2 988 aa16.55■□□□□ 0.24
MCM4-205ENST00000518680 USP35Q9P2H5 1018 aa16.55■□□□□ 0.24
MCM4-205ENST00000518680 COL5A2P05997 1499 aaPredicted RBP16.54■□□□□ 0.24
MCM4-205ENST00000518680 AATKQ6ZMQ8 1374 aa16.54■□□□□ 0.24
MCM4-205ENST00000518680 LARP1Q6PKG0 1096 aaKnown RBP16.54■□□□□ 0.24
MCM4-205ENST00000518680 TESK2Q96S53 571 aa16.54■□□□□ 0.24
MCM4-205ENST00000518680 BARGINQ6ZT62 677 aa16.53■□□□□ 0.24
MCM4-205ENST00000518680 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.53■□□□□ 0.24
MCM4-205ENST00000518680 TCP11L2Q8N4U5 519 aa16.53■□□□□ 0.24
MCM4-205ENST00000518680 SLC12A5Q9H2X9 1139 aa16.53■□□□□ 0.24
MCM4-205ENST00000518680 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
MCM4-205ENST00000518680 TIMELESSQ9UNS1 1208 aa16.53■□□□□ 0.24
MCM4-205ENST00000518680 CD163L1Q9NR16 1453 aa16.53■□□□□ 0.24
MCM4-205ENST00000518680 COL18A1P39060 1754 aa16.52■□□□□ 0.24
MCM4-205ENST00000518680 USP47Q96K76 1375 aa16.51■□□□□ 0.23
MCM4-205ENST00000518680 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
MCM4-205ENST00000518680 SOX12O15370 315 aa16.51■□□□□ 0.23
MCM4-205ENST00000518680 THRAP3Q9Y2W1 955 aaKnown RBP16.51■□□□□ 0.23
MCM4-205ENST00000518680 CRB1P82279 1406 aa16.51■□□□□ 0.23
MCM4-205ENST00000518680 EDC4Q6P2E9 1401 aaKnown RBP16.51■□□□□ 0.23
MCM4-205ENST00000518680 RGPD1P0DJD0 1748 aa16.5■□□□□ 0.23
MCM4-205ENST00000518680 USP54Q70EL1 1684 aa16.5■□□□□ 0.23
MCM4-205ENST00000518680 ARHGEF25Q86VW2 580 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms