RNA–Protein interactions for RNA: ENST00000518574.1

SMIM19-207, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-207ENST00000518574 CCDC125Q86Z20 511 aa27.1■■□□□ 1.93
SMIM19-207ENST00000518574 PAK3O75914 559 aaPredicted RBP27.09■■□□□ 1.93
SMIM19-207ENST00000518574 CCDC9Q9Y3X0 531 aaKnown RBP27.07■■□□□ 1.92
SMIM19-207ENST00000518574 CCDC61Q9Y6R9 512 aa27.07■■□□□ 1.92
SMIM19-207ENST00000518574 POLR3AO14802 1390 aaPredicted RBP27.07■■□□□ 1.92
SMIM19-207ENST00000518574 ONECUT3O60422 494 aaPredicted RBP27.06■■□□□ 1.92
SMIM19-207ENST00000518574 SEPT12Q8IYM1 358 aa27.05■■□□□ 1.92
SMIM19-207ENST00000518574 BTG4Q9NY30 223 aa27.04■■□□□ 1.92
SMIM19-207ENST00000518574 CENPJQ9HC77 1338 aaPredicted RBP27.04■■□□□ 1.92
SMIM19-207ENST00000518574 QRICH2Q9H0J4 1663 aa27.04■■□□□ 1.92
SMIM19-207ENST00000518574 PLEKHG3A1L390 1219 aa27.03■■□□□ 1.92
SMIM19-207ENST00000518574 ACEP12821 1306 aa27.03■■□□□ 1.92
SMIM19-207ENST00000518574 L3MBTL2Q969R5 705 aa27.03■■□□□ 1.92
SMIM19-207ENST00000518574 PHRF1Q9P1Y6 1649 aaKnown RBP27.03■■□□□ 1.92
SMIM19-207ENST00000518574 NBPF8Q3BBV2 869 aa27.01■■□□□ 1.91
SMIM19-207ENST00000518574 BLMP54132 1417 aaPredicted RBP27■■□□□ 1.91
SMIM19-207ENST00000518574 PRDM11Q9NQV5 511 aa27■■□□□ 1.91
SMIM19-207ENST00000518574 TRPM1Q7Z4N2 1603 aa27■■□□□ 1.91
SMIM19-207ENST00000518574 SRPK2P78362 688 aaKnown RBP26.98■■□□□ 1.91
SMIM19-207ENST00000518574 KRT27Q7Z3Y8 459 aa26.97■■□□□ 1.91
SMIM19-207ENST00000518574 SIN3AQ96ST3 1273 aa26.97■■□□□ 1.91
SMIM19-207ENST00000518574 PPIP5K1Q6PFW1 1433 aa26.96■■□□□ 1.91
SMIM19-207ENST00000518574 KIAA0232Q92628 1395 aa26.96■■□□□ 1.91
SMIM19-207ENST00000518574 FAM98CQ17RN3 349 aaKnown RBP26.94■■□□□ 1.9
SMIM19-207ENST00000518574 SRCAPQ6ZRS2 3230 aa26.94■■□□□ 1.9
SMIM19-207ENST00000518574 SPATA31A5Q5VU36 1347 aa26.93■■□□□ 1.9
SMIM19-207ENST00000518574 SPATA31A7Q8IWB4 1347 aa26.93■■□□□ 1.9
SMIM19-207ENST00000518574 A0A0G2JS52 829 aa26.93■■□□□ 1.9
SMIM19-207ENST00000518574 MYT1Q01538 1121 aa26.93■■□□□ 1.9
SMIM19-207ENST00000518574 NUTM2GQ5VZR2 741 aa26.92■■□□□ 1.9
SMIM19-207ENST00000518574 CABP2Q9NPB3 220 aa26.92■■□□□ 1.9
SMIM19-207ENST00000518574 ZRANB1Q9UGI0 708 aa26.92■■□□□ 1.9
SMIM19-207ENST00000518574 NRKQ7Z2Y5 1582 aa26.92■■□□□ 1.9
SMIM19-207ENST00000518574 NEUROD1Q13562 356 aa26.91■■□□□ 1.9
SMIM19-207ENST00000518574 ABTB2Q8N961 1025 aa26.91■■□□□ 1.9
SMIM19-207ENST00000518574 BRD4O60885 1362 aaPredicted RBP26.91■■□□□ 1.9
SMIM19-207ENST00000518574 THSD7AQ9UPZ6 1657 aa26.9■■□□□ 1.9
SMIM19-207ENST00000518574 SF3B2Q13435 895 aaKnown RBP26.9■■□□□ 1.9
SMIM19-207ENST00000518574 ROCK2O75116 1388 aaKnown RBP26.88■■□□□ 1.89
SMIM19-207ENST00000518574 ZC3H6P61129 1189 aaKnown RBP26.88■■□□□ 1.89
SMIM19-207ENST00000518574 CHRNA2Q15822 529 aa26.88■■□□□ 1.89
SMIM19-207ENST00000518574 USP19O94966 1318 aa26.88■■□□□ 1.89
SMIM19-207ENST00000518574 EVC2Q86UK5 1308 aa26.87■■□□□ 1.89
SMIM19-207ENST00000518574 CPDO75976 1380 aa26.86■■□□□ 1.89
SMIM19-207ENST00000518574 NLRP13Q86W25 1043 aa26.86■■□□□ 1.89
SMIM19-207ENST00000518574 SPATA31A1Q5TZJ5 1347 aa26.85■■□□□ 1.89
SMIM19-207ENST00000518574 USP6P35125 1406 aa26.84■■□□□ 1.89
SMIM19-207ENST00000518574 DEFB132Q7Z7B7 95 aa26.84■■□□□ 1.89
SMIM19-207ENST00000518574 CABP1Q9NZU7 370 aa26.84■■□□□ 1.89
SMIM19-207ENST00000518574 LMO7Q8WWI1 1683 aa26.84■■□□□ 1.89
SMIM19-207ENST00000518574 STRN4Q9NRL3 753 aa26.83■■□□□ 1.89
SMIM19-207ENST00000518574 RGPD1P0DJD0 1748 aa26.82■■□□□ 1.88
SMIM19-207ENST00000518574 CAMTA1Q9Y6Y1 1673 aa26.81■■□□□ 1.88
SMIM19-207ENST00000518574 SSH2Q76I76 1423 aa26.81■■□□□ 1.88
SMIM19-207ENST00000518574 GCP02774 474 aa26.8■■□□□ 1.88
SMIM19-207ENST00000518574 EVA1CP58658 441 aa26.79■■□□□ 1.88
SMIM19-207ENST00000518574 AKAP12Q02952 1782 aa26.78■■□□□ 1.88
SMIM19-207ENST00000518574 BAG6P46379 1132 aa26.77■■□□□ 1.88
SMIM19-207ENST00000518574 PIK3C2AO00443 1686 aa26.76■■□□□ 1.87
SMIM19-207ENST00000518574 SLIT3O75094 1523 aa26.76■■□□□ 1.87
SMIM19-207ENST00000518574 NLRP6P59044 892 aa26.75■■□□□ 1.87
SMIM19-207ENST00000518574 BARGINQ6ZT62 677 aa26.75■■□□□ 1.87
SMIM19-207ENST00000518574 SBNO2Q9Y2G9 1366 aa26.74■■□□□ 1.87
SMIM19-207ENST00000518574 FAM182BQ5T319 152 aa26.74■■□□□ 1.87
SMIM19-207ENST00000518574 TNS1Q9HBL0 1735 aaKnown RBP26.73■■□□□ 1.87
SMIM19-207ENST00000518574 LARP1Q6PKG0 1096 aaKnown RBP26.73■■□□□ 1.87
SMIM19-207ENST00000518574 ZNF692Q9BU19 519 aaPredicted RBP26.73■■□□□ 1.87
SMIM19-207ENST00000518574 USP35Q9P2H5 1018 aa26.73■■□□□ 1.87
SMIM19-207ENST00000518574 COL5A2P05997 1499 aaPredicted RBP26.72■■□□□ 1.87
SMIM19-207ENST00000518574 TCP11L2Q8N4U5 519 aa26.7■■□□□ 1.86
SMIM19-207ENST00000518574 AATKQ6ZMQ8 1374 aa26.7■■□□□ 1.86
SMIM19-207ENST00000518574 TONSLQ96HA7 1378 aa26.7■■□□□ 1.86
SMIM19-207ENST00000518574 DISP2A7MBM2 1401 aa26.69■■□□□ 1.86
SMIM19-207ENST00000518574 FAM196AQ6ZSG2 479 aa26.69■■□□□ 1.86
SMIM19-207ENST00000518574 THRAP3Q9Y2W1 955 aaKnown RBP26.69■■□□□ 1.86
SMIM19-207ENST00000518574 CPSF1Q10570 1443 aaKnown RBP26.68■■□□□ 1.86
SMIM19-207ENST00000518574 CARD11Q9BXL7 1154 aa26.68■■□□□ 1.86
SMIM19-207ENST00000518574 TTC21BQ7Z4L5 1316 aa26.67■■□□□ 1.86
SMIM19-207ENST00000518574 TTC21AQ8NDW8 1320 aa26.67■■□□□ 1.86
SMIM19-207ENST00000518574 COL18A1P39060 1754 aa26.67■■□□□ 1.86
SMIM19-207ENST00000518574 MON2Q7Z3U7 1717 aa26.67■■□□□ 1.86
SMIM19-207ENST00000518574 PARP4Q9UKK3 1724 aaKnown RBP26.67■■□□□ 1.86
SMIM19-207ENST00000518574 CRB1P82279 1406 aa26.66■■□□□ 1.86
SMIM19-207ENST00000518574 EN1Q05925 392 aaPredicted RBP26.65■■□□□ 1.86
SMIM19-207ENST00000518574 PDE3BQ13370 1112 aa26.65■■□□□ 1.86
SMIM19-207ENST00000518574 KTN1Q86UP2 1357 aaKnown RBP26.64■■□□□ 1.86
SMIM19-207ENST00000518574 ZBTB7CA1YPR0 619 aa26.64■■□□□ 1.86
SMIM19-207ENST00000518574 KCNH5Q8NCM2 988 aa26.63■■□□□ 1.85
SMIM19-207ENST00000518574 TRIM37O94972 964 aa26.61■■□□□ 1.85
SMIM19-207ENST00000518574 RGPD5Q99666 1765 aa26.6■■□□□ 1.85
SMIM19-207ENST00000518574 ARHGEF25Q86VW2 580 aa26.59■■□□□ 1.85
SMIM19-207ENST00000518574 LRP5O75197 1615 aa26.58■■□□□ 1.85
SMIM19-207ENST00000518574 USP54Q70EL1 1684 aa26.58■■□□□ 1.85
SMIM19-207ENST00000518574 TRIM26Q12899 539 aaPredicted RBP26.58■■□□□ 1.85
SMIM19-207ENST00000518574 NFAT5O94916 1531 aa26.58■■□□□ 1.85
SMIM19-207ENST00000518574 WNK3Q9BYP7 1800 aa26.58■■□□□ 1.84
SMIM19-207ENST00000518574 WDR17Q8IZU2 1322 aa26.57■■□□□ 1.84
SMIM19-207ENST00000518574 PARD3Q8TEW0 1356 aa26.57■■□□□ 1.84
SMIM19-207ENST00000518574 CD163L1Q9NR16 1453 aa26.56■■□□□ 1.84
SMIM19-207ENST00000518574 TOM1L2Q6ZVM7 507 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms