RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 PKDCCQ504Y2 493 aa7.55□□□□□ -1.2
VPS13B-207ENST00000518569 ZNF697Q5TEC3 545 aa7.55□□□□□ -1.2
VPS13B-207ENST00000518569 SPRYD7Q5W111 196 aa7.55□□□□□ -1.2
VPS13B-207ENST00000518569 COG6Q9Y2V7 657 aa7.55□□□□□ -1.2
VPS13B-207ENST00000518569 NR6A1Q15406 480 aa7.54□□□□□ -1.2
VPS13B-207ENST00000518569 ZNF598Q86UK7 904 aaKnown RBP7.54□□□□□ -1.2
VPS13B-207ENST00000518569 ARMC2Q8NEN0 867 aa7.54□□□□□ -1.2
VPS13B-207ENST00000518569 FCF1Q9Y324 198 aaKnown RBP7.54□□□□□ -1.2
VPS13B-207ENST00000518569 ZC3H4Q9UPT8 1303 aaKnown RBP7.53□□□□□ -1.2
VPS13B-207ENST00000518569 TNFRSF10AO00220 468 aa7.53□□□□□ -1.2
VPS13B-207ENST00000518569 CTHP32929 405 aa7.53□□□□□ -1.2
VPS13B-207ENST00000518569 ZNF787Q6DD87 383 aa7.53□□□□□ -1.2
VPS13B-207ENST00000518569 LIAT1Q6ZQX7 453 aa7.53□□□□□ -1.2
VPS13B-207ENST00000518569 EMID1Q96A84 441 aaPredicted RBP7.53□□□□□ -1.2
VPS13B-207ENST00000518569 MAP10Q9P2G4 905 aa7.53□□□□□ -1.2
VPS13B-207ENST00000518569 FAM187AA6NFU0 413 aa7.52□□□□□ -1.21
VPS13B-207ENST00000518569 WWC1Q8IX03 1113 aa7.52□□□□□ -1.21
VPS13B-207ENST00000518569 CCDC24Q8N4L8 307 aa7.52□□□□□ -1.21
VPS13B-207ENST00000518569 EPS8L1Q8TE68 723 aa7.52□□□□□ -1.21
VPS13B-207ENST00000518569 GPKOWQ92917 476 aaPredicted RBP eCLIP7.52□□□□□ -1.21
VPS13B-207ENST00000518569 CLUAP1Q96AJ1 413 aa7.52□□□□□ -1.21
VPS13B-207ENST00000518569 POM121Q96HA1 1249 aa7.52□□□□□ -1.21
VPS13B-207ENST00000518569 GDPD2Q9HCC8 539 aa7.52□□□□□ -1.21
VPS13B-207ENST00000518569 FKBPLQ9UIM3 349 aa7.52□□□□□ -1.21
VPS13B-207ENST00000518569 TBC1D2BQ9UPU7 963 aa7.52□□□□□ -1.21
VPS13B-207ENST00000518569 TRIM67Q6ZTA4 783 aa7.51□□□□□ -1.21
VPS13B-207ENST00000518569 FNBP4Q8N3X1 1017 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-207ENST00000518569 UNC93B1Q9H1C4 597 aa7.51□□□□□ -1.21
VPS13B-207ENST00000518569 GPR37L1O60883 481 aa7.5□□□□□ -1.21
VPS13B-207ENST00000518569 PLA2G2CQ5R387 149 aa7.5□□□□□ -1.21
VPS13B-207ENST00000518569 PTCRAQ6ISU1 281 aaPredicted RBP7.5□□□□□ -1.21
VPS13B-207ENST00000518569 PROSER2Q86WR7 435 aaPredicted RBP7.5□□□□□ -1.21
VPS13B-207ENST00000518569 ZBTB24O43167 697 aaPredicted RBP7.49□□□□□ -1.21
VPS13B-207ENST00000518569 RPIAP49247 311 aa7.49□□□□□ -1.21
VPS13B-207ENST00000518569 FOXC1Q12948 553 aa7.49□□□□□ -1.21
VPS13B-207ENST00000518569 WASHC4Q2M389 1173 aa7.49□□□□□ -1.21
VPS13B-207ENST00000518569 NBPF14Q5TI25 921 aa7.49□□□□□ -1.21
VPS13B-207ENST00000518569 GPSM3Q9Y4H4 160 aa7.49□□□□□ -1.21
VPS13B-207ENST00000518569 TRAK2O60296 914 aa7.48□□□□□ -1.21
VPS13B-207ENST00000518569 DGAT1O75907 488 aa7.48□□□□□ -1.21
VPS13B-207ENST00000518569 ABL2P42684 1182 aa7.48□□□□□ -1.21
VPS13B-207ENST00000518569 PRR20EP86478 221 aa7.48□□□□□ -1.21
VPS13B-207ENST00000518569 PRR20CP86479 221 aa7.48□□□□□ -1.21
VPS13B-207ENST00000518569 PRR20DP86480 221 aa7.48□□□□□ -1.21
VPS13B-207ENST00000518569 PRR20BP86481 221 aa7.48□□□□□ -1.21
VPS13B-207ENST00000518569 PRR20AP86496 221 aa7.48□□□□□ -1.21
VPS13B-207ENST00000518569 IRF5Q13568 498 aa7.48□□□□□ -1.21
VPS13B-207ENST00000518569 PDXDC2PQ6P474 469 aa7.48□□□□□ -1.21
VPS13B-207ENST00000518569 GDF9O60383 454 aa7.45□□□□□ -1.22
VPS13B-207ENST00000518569 MYT1Q01538 1121 aa7.45□□□□□ -1.22
VPS13B-207ENST00000518569 PTK2Q05397 1052 aa7.45□□□□□ -1.22
VPS13B-207ENST00000518569 ZNF330Q9Y3S2 320 aaPredicted RBP7.45□□□□□ -1.22
VPS13B-207ENST00000518569 ZBBXA8MT70 800 aa7.44□□□□□ -1.22
VPS13B-207ENST00000518569 CD2BP2O95400 341 aaKnown RBP7.44□□□□□ -1.22
VPS13B-207ENST00000518569 WNT7BP56706 349 aa7.44□□□□□ -1.22
VPS13B-207ENST00000518569 TRIM32Q13049 653 aa7.44□□□□□ -1.22
VPS13B-207ENST00000518569 NR1H3Q13133 447 aa7.44□□□□□ -1.22
VPS13B-207ENST00000518569 SH3BP5LQ7L8J4 393 aa7.44□□□□□ -1.22
VPS13B-207ENST00000518569 ZNF511Q8NB15 262 aa7.44□□□□□ -1.22
VPS13B-207ENST00000518569 BAP1Q92560 729 aa7.44□□□□□ -1.22
VPS13B-207ENST00000518569 SH3RF1Q7Z6J0 888 aa7.43□□□□□ -1.22
VPS13B-207ENST00000518569 BPHLQ86WA6 291 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-207ENST00000518569 SOX11P35716 441 aa7.42□□□□□ -1.22
VPS13B-207ENST00000518569 SH3BP2P78314 561 aa7.42□□□□□ -1.22
VPS13B-207ENST00000518569 ZNF592Q92610 1267 aa7.42□□□□□ -1.22
VPS13B-207ENST00000518569 ST8SIA5O15466 376 aa7.41□□□□□ -1.22
VPS13B-207ENST00000518569 FBXO45P0C2W1 286 aa7.41□□□□□ -1.22
VPS13B-207ENST00000518569 MCCD1P59942 119 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-207ENST00000518569 CYP4X1Q8N118 509 aa7.41□□□□□ -1.22
VPS13B-207ENST00000518569 ARHGAP9Q9BRR9 750 aa7.41□□□□□ -1.22
VPS13B-207ENST00000518569 PKD2L1Q9P0L9 805 aa7.41□□□□□ -1.22
VPS13B-207ENST00000518569 EIF4G2P78344 907 aaKnown RBP eCLIP7.4□□□□□ -1.22
VPS13B-207ENST00000518569 VAC14Q08AM6 782 aa7.4□□□□□ -1.22
VPS13B-207ENST00000518569 LINC01559Q495D7 138 aa7.4□□□□□ -1.22
VPS13B-207ENST00000518569 OCSTAMPQ9BR26 566 aa7.4□□□□□ -1.22
VPS13B-207ENST00000518569 SKOR1P84550 965 aa7.39□□□□□ -1.23
VPS13B-207ENST00000518569 ZBTB33Q86T24 672 aa7.39□□□□□ -1.23
VPS13B-207ENST00000518569 FOXJ1Q92949 421 aa7.39□□□□□ -1.23
VPS13B-207ENST00000518569 ZNF775Q96BV0 537 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-207ENST00000518569 TTC24A2A3L6 582 aaPredicted RBP7.38□□□□□ -1.23
VPS13B-207ENST00000518569 VARSP26640 1264 aaKnown RBP7.38□□□□□ -1.23
VPS13B-207ENST00000518569 AGERQ15109 404 aa7.38□□□□□ -1.23
VPS13B-207ENST00000518569 ADAM32Q8TC27 787 aa7.38□□□□□ -1.23
VPS13B-207ENST00000518569 C1QTNF2Q9BXJ5 285 aa7.38□□□□□ -1.23
VPS13B-207ENST00000518569 ZNF777Q9ULD5 760 aaPredicted RBP7.38□□□□□ -1.23
VPS13B-207ENST00000518569 POM121CA8CG34 1229 aa7.37□□□□□ -1.23
VPS13B-207ENST00000518569 C4orf48Q5BLP8 95 aa7.37□□□□□ -1.23
VPS13B-207ENST00000518569 TRMT44Q8IYL2 757 aaKnown RBP7.37□□□□□ -1.23
VPS13B-207ENST00000518569 ALG2Q9H553 416 aa7.37□□□□□ -1.23
VPS13B-207ENST00000518569 MAGEB6P1A0A0J9YX57 407 aa7.36□□□□□ -1.23
VPS13B-207ENST00000518569 POTECB2RU33 542 aa7.36□□□□□ -1.23
VPS13B-207ENST00000518569 SUPT5HO00267 1087 aaKnown RBP7.36□□□□□ -1.23
VPS13B-207ENST00000518569 SEMA3FQ13275 785 aa7.36□□□□□ -1.23
VPS13B-207ENST00000518569 ERFEQ4G0M1 354 aa7.36□□□□□ -1.23
VPS13B-207ENST00000518569 RC3H1Q5TC82 1133 aaKnown RBP7.36□□□□□ -1.23
VPS13B-207ENST00000518569 MPNDQ8N594 471 aa7.36□□□□□ -1.23
VPS13B-207ENST00000518569 AAASQ9NRG9 546 aa7.36□□□□□ -1.23
VPS13B-207ENST00000518569 CDV3Q9UKY7 258 aaKnown RBP7.36□□□□□ -1.23
VPS13B-207ENST00000518569 WNT7AO00755 349 aa7.35□□□□□ -1.23
VPS13B-207ENST00000518569 FAM174AQ8TBP5 190 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms